RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 ZNF397Q8NF99 534 aaPredicted RBP11.45□□□□□ -0.58
TMOD3-201ENST00000308580 WTAPQ15007 396 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 UVSSAQ2YD98 709 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 RAB34Q9BZG1 259 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 EIF3JO75822 258 aaKnown RBP11.45□□□□□ -0.58
TMOD3-201ENST00000308580 KIF5BP33176 963 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 RAB3GAP1Q15042 981 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 NBPF5PQ86XG9 351 aaPredicted RBP11.45□□□□□ -0.58
TMOD3-201ENST00000308580 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.45□□□□□ -0.581e-6■■■■■ 61.5
TMOD3-201ENST00000308580 DACT1Q9NYF0 836 aa11.45□□□□□ -0.58
TMOD3-201ENST00000308580 CYP7A1P22680 504 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 FKBP15Q5T1M5 1219 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 CHL1O00533 1208 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 ERLIN2O94905 339 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 FAM193AP78312 1265 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 KIF4BQ2VIQ3 1234 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 DCAF5Q96JK2 942 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 ALG1Q9BT22 464 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
TMOD3-201ENST00000308580 RRP9O43818 475 aaKnown RBP11.44□□□□□ -0.58
TMOD3-201ENST00000308580 TFCP2Q12800 502 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 KAT14Q9H8E8 782 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 BAG3O95817 575 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 IL2RBP14784 551 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 TMEM266Q2M3C6 531 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 SLF2Q8IX21 1173 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 CENPHQ9H3R5 247 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 STX8Q9UNK0 236 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 EIF4G3O43432 1585 aaKnown RBP11.44□□□□□ -0.58
TMOD3-201ENST00000308580 CAVIN2O95810 425 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 IDEP14735 1019 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 UBA5Q9GZZ9 404 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 TSPYL1Q9H0U9 437 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 KDM2BQ8NHM5 1336 aa11.44□□□□□ -0.58
TMOD3-201ENST00000308580 GOLGA6L10A6NI86 522 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 RBM25P49756 843 aaKnown RBP11.43□□□□□ -0.58
TMOD3-201ENST00000308580 SPA17Q15506 151 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 CREB3L3Q68CJ9 461 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 NEMFO60524 1076 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 ATP6V1AP38606 617 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 UBA7P41226 1012 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 HELBQ8NG08 1087 aaPredicted RBP11.43□□□□□ -0.58
TMOD3-201ENST00000308580 KIF5CO60282 957 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 ANKRD18AQ8IVF6 992 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 TAF4BQ92750 862 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 BICC1Q9H694 974 aaKnown RBP11.43□□□□□ -0.58
TMOD3-201ENST00000308580 SLC4A4Q9Y6R1 1079 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
TMOD3-201ENST00000308580 GSDMDP57764 484 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 IQCEQ6IPM2 695 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 CHST3Q7LGC8 479 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 TMCO3Q6UWJ1 677 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 CACNA2D4Q7Z3S7 1137 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 CCDC102AQ96A19 550 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 SYKP43405 635 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 NUP88Q99567 741 aaPredicted RBP11.43□□□□□ -0.58
TMOD3-201ENST00000308580 PTPRTO14522 1441 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 TRPM2O94759 1503 aa11.43□□□□□ -0.58
TMOD3-201ENST00000308580 CPA1P15085 419 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 ENOX2Q16206 610 aaKnown RBP11.42□□□□□ -0.58
TMOD3-201ENST00000308580 CRNKL1Q9BZJ0 848 aaKnown RBP11.42□□□□□ -0.58
TMOD3-201ENST00000308580 PRC1O43663 620 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 TCP11L1Q9NUJ3 509 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
TMOD3-201ENST00000308580 PPP1R12BO60237 982 aaPredicted RBP11.42□□□□□ -0.58
TMOD3-201ENST00000308580 CCDC148Q8NFR7 591 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 ZNF830Q96NB3 372 aaPredicted RBP11.42□□□□□ -0.58
TMOD3-201ENST00000308580 KRT23Q9C075 422 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 RFC4P35249 363 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 SPTY2D1Q68D10 685 aaPredicted RBP11.42□□□□□ -0.58
TMOD3-201ENST00000308580 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 EDC4Q6P2E9 1401 aaKnown RBP11.42□□□□□ -0.58
TMOD3-201ENST00000308580 PRIM1P49642 420 aaKnown RBP11.42□□□□□ -0.58
TMOD3-201ENST00000308580 WWC2Q6AWC2 1192 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 FAM200AQ8TCP9 573 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 ESR2Q92731 530 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 TSG101Q99816 390 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 ANO6Q4KMQ2 910 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 MRPS27Q92552 414 aaKnown RBP11.42□□□□□ -0.58
TMOD3-201ENST00000308580 SIRT1Q96EB6 747 aa11.42□□□□□ -0.58
TMOD3-201ENST00000308580 RNF113AO15541 343 aaKnown RBP11.41□□□□□ -0.58
TMOD3-201ENST00000308580 TMX1Q9H3N1 280 aa11.41□□□□□ -0.58
TMOD3-201ENST00000308580 MARCKSP29966 332 aaPredicted RBP11.41□□□□□ -0.58
TMOD3-201ENST00000308580 DZIP3Q86Y13 1208 aaKnown RBP11.41□□□□□ -0.58
TMOD3-201ENST00000308580 KCNG4Q8TDN1 519 aa11.41□□□□□ -0.58
TMOD3-201ENST00000308580 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
TMOD3-201ENST00000308580 MAST1Q9Y2H9 1570 aa11.41□□□□□ -0.58
TMOD3-201ENST00000308580 RTN1Q16799 776 aa11.41□□□□□ -0.58
TMOD3-201ENST00000308580 CCDC12Q8WUD4 166 aaPredicted RBP11.41□□□□□ -0.58
TMOD3-201ENST00000308580 ZMYM4Q5VZL5 1548 aa11.41□□□□□ -0.58
TMOD3-201ENST00000308580 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
TMOD3-201ENST00000308580 MTIF2P46199 727 aaKnown RBP11.41□□□□□ -0.58
TMOD3-201ENST00000308580 DDB1Q16531 1140 aa11.41□□□□□ -0.58
TMOD3-201ENST00000308580 PRKCSHP14314 528 aaPredicted RBP11.4□□□□□ -0.58
TMOD3-201ENST00000308580 HSPA2P54652 639 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 APOBRQ0VD83 1088 aa11.4□□□□□ -0.58
TMOD3-201ENST00000308580 INTS4Q96HW7 963 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms