RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
TRIM40-205ENST00000307859 DDX60Q8IY21 1712 aaKnown RBP14.53□□□□□ -0.08
TRIM40-205ENST00000307859 GLRX3O76003 335 aaKnown RBP14.53□□□□□ -0.08
TRIM40-205ENST00000307859 CRKLP46109 303 aaKnown RBP14.53□□□□□ -0.08
TRIM40-205ENST00000307859 HLFQ16534 295 aa14.53□□□□□ -0.08
TRIM40-205ENST00000307859 GPATCH3Q96I76 525 aa14.53□□□□□ -0.08
TRIM40-205ENST00000307859 SIL1Q9H173 461 aa14.53□□□□□ -0.08
TRIM40-205ENST00000307859 DAXXQ9UER7 740 aaPredicted RBP14.53□□□□□ -0.08
TRIM40-205ENST00000307859 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.53□□□□□ -0.08
TRIM40-205ENST00000307859 ERC2O15083 957 aa14.52□□□□□ -0.08
TRIM40-205ENST00000307859 IFIT2P09913 472 aaKnown RBP14.52□□□□□ -0.08
TRIM40-205ENST00000307859 AACSQ86V21 672 aa14.52□□□□□ -0.08
TRIM40-205ENST00000307859 NLRP10Q86W26 655 aa14.52□□□□□ -0.08
TRIM40-205ENST00000307859 DZIP3Q86Y13 1208 aaKnown RBP14.52□□□□□ -0.08
TRIM40-205ENST00000307859 ZBTB38Q8NAP3 1195 aaPredicted RBP14.52□□□□□ -0.08
TRIM40-205ENST00000307859 EAF2Q96CJ1 260 aaPredicted RBP14.52□□□□□ -0.08
TRIM40-205ENST00000307859 ECHDC1Q9NTX5 307 aa14.52□□□□□ -0.08
TRIM40-205ENST00000307859 TRIM6-TRIM34B2RNG4 842 aa14.52□□□□□ -0.09
TRIM40-205ENST00000307859 REC8O95072 547 aa14.52□□□□□ -0.09
TRIM40-205ENST00000307859 CHMLP26374 656 aa14.52□□□□□ -0.09
TRIM40-205ENST00000307859 SLC4A3P48751 1232 aa14.52□□□□□ -0.09
TRIM40-205ENST00000307859 KIF2CQ99661 725 aa14.52□□□□□ -0.09
TRIM40-205ENST00000307859 USP26Q9BXU7 913 aa14.52□□□□□ -0.09
TRIM40-205ENST00000307859 RTL5Q5HYW3 569 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-205ENST00000307859 RILPL2Q969X0 211 aa14.51□□□□□ -0.09
TRIM40-205ENST00000307859 ESYT1Q9BSJ8 1104 aa14.51□□□□□ -0.09
TRIM40-205ENST00000307859 ZNF34Q8IZ26 560 aa14.5□□□□□ -0.09
TRIM40-205ENST00000307859 CNTROBQ8N137 903 aa14.5□□□□□ -0.09
TRIM40-205ENST00000307859 TBC1D2Q9BYX2 928 aa14.5□□□□□ -0.09
TRIM40-205ENST00000307859 TBC1D2BQ9UPU7 963 aa14.5□□□□□ -0.09
TRIM40-205ENST00000307859 COL24A1Q17RW2 1714 aa14.5□□□□□ -0.09
TRIM40-205ENST00000307859 YBX3P16989 372 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRIM40-205ENST00000307859 APLP1P51693 650 aa14.49□□□□□ -0.09
TRIM40-205ENST00000307859 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
TRIM40-205ENST00000307859 ANP32EQ9BTT0 268 aa14.49□□□□□ -0.09
TRIM40-205ENST00000307859 CNTNAP4Q9C0A0 1308 aa14.49□□□□□ -0.09
TRIM40-205ENST00000307859 CIAO1O76071 339 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 CSF1RP07333 972 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 GPTP24298 496 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 TNNI3KQ59H18 835 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 ATG9AQ7Z3C6 839 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 NLGN2Q8NFZ4 835 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 SNX21Q969T3 373 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 FAM89AQ96GI7 184 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 CHMP3Q9Y3E7 222 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 FPGT-TNNI3KV9GXZ4 949 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 SPEF2Q9C093 1822 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 UBN2Q6ZU65 1347 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 CAMTA2O94983 1202 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 TFCP2Q12800 502 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 ZNF827Q17R98 1081 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 CCDC8Q9H0W5 538 aaPredicted RBP14.48□□□□□ -0.09
TRIM40-205ENST00000307859 GPR108Q9NPR9 543 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 TLR7Q9NYK1 1049 aaKnown RBP14.48□□□□□ -0.09
TRIM40-205ENST00000307859 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 C4AP0C0L4 1744 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 C4BP0C0L5 1744 aa14.48□□□□□ -0.09
TRIM40-205ENST00000307859 ZNF609O15014 1411 aa14.47□□□□□ -0.09
TRIM40-205ENST00000307859 EYA2O00167 538 aa14.47□□□□□ -0.09
TRIM40-205ENST00000307859 EPB41L2O43491 1005 aaKnown RBP14.47□□□□□ -0.09
TRIM40-205ENST00000307859 IL15P40933 162 aaPredicted RBP14.47□□□□□ -0.09
TRIM40-205ENST00000307859 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
TRIM40-205ENST00000307859 ARAP2Q8WZ64 1704 aa14.46□□□□□ -0.09
TRIM40-205ENST00000307859 MAP4K4O95819 1239 aaPredicted RBP14.46□□□□□ -0.09
TRIM40-205ENST00000307859 AKT1S1Q96B36 256 aa14.46□□□□□ -0.09
TRIM40-205ENST00000307859 DBNLQ9UJU6 430 aaKnown RBP14.46□□□□□ -0.09
TRIM40-205ENST00000307859 RGL2O15211 777 aa14.45□□□□□ -0.1
TRIM40-205ENST00000307859 CCDC57Q2TAC2 916 aa14.45□□□□□ -0.1
TRIM40-205ENST00000307859 DNAJC5GQ8N7S2 189 aa14.45□□□□□ -0.1
TRIM40-205ENST00000307859 EVI5LQ96CN4 794 aa14.45□□□□□ -0.1
TRIM40-205ENST00000307859 MYH7P12883 1935 aa14.45□□□□□ -0.1
TRIM40-205ENST00000307859 A0A1B0GUL6 1792 aa14.45□□□□□ -0.1
TRIM40-205ENST00000307859 PRELPP51888 382 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 CTSWP56202 376 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 RC3H1Q5TC82 1133 aaKnown RBP14.44□□□□□ -0.1
TRIM40-205ENST00000307859 SYNE4Q8N205 404 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 AK7Q96M32 723 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 TRMT112Q9UI30 125 aaKnown RBP14.44□□□□□ -0.1
TRIM40-205ENST00000307859 QSER1Q2KHR3 1735 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 UBR3Q6ZT12 1888 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 IRS4O14654 1257 aaPredicted RBP14.44□□□□□ -0.1
TRIM40-205ENST00000307859 PDE8AO60658 829 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 ATP5JP18859 108 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 RABEP1Q15276 862 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 LRRC24Q50LG9 513 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 PARP10Q53GL7 1025 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 HSCBQ8IWL3 235 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 TTLL11Q8NHH1 800 aa14.44□□□□□ -0.1
TRIM40-205ENST00000307859 ZNF594Q96JF6 807 aaPredicted RBP14.44□□□□□ -0.1
TRIM40-205ENST00000307859 RIC1Q4ADV7 1423 aa14.43□□□□□ -0.1
TRIM40-205ENST00000307859 SGSM2O43147 1006 aa14.43□□□□□ -0.1
TRIM40-205ENST00000307859 IFIT5Q13325 482 aaKnown RBP14.43□□□□□ -0.1
TRIM40-205ENST00000307859 IL17RAQ96F46 866 aa14.43□□□□□ -0.1
TRIM40-205ENST00000307859 IL25Q9H293 177 aa14.43□□□□□ -0.1
TRIM40-205ENST00000307859 AKAP11Q9UKA4 1901 aa14.43□□□□□ -0.1
TRIM40-205ENST00000307859 SLC27A3Q5K4L6 730 aa14.42□□□□□ -0.1
TRIM40-205ENST00000307859 SUSD4Q5VX71 490 aa14.42□□□□□ -0.1
TRIM40-205ENST00000307859 CLEC4GQ6UXB4 293 aa14.42□□□□□ -0.1
TRIM40-205ENST00000307859 DBNDD2Q9BQY9 259 aa14.42□□□□□ -0.1
TRIM40-205ENST00000307859 PUS3Q9BZE2 481 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms