RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 PABPC4Q13310 644 aaKnown RBP eCLIP12.32□□□□□ -0.44
ZNF556-201ENST00000307635 GJD4Q96KN9 370 aaPredicted RBP12.32□□□□□ -0.44
ZNF556-201ENST00000307635 CHMP5Q9NZZ3 219 aa12.32□□□□□ -0.44
ZNF556-201ENST00000307635 STK3Q13188 491 aa12.32□□□□□ -0.44
ZNF556-201ENST00000307635 CCDC150Q8NCX0 1101 aa12.32□□□□□ -0.44
ZNF556-201ENST00000307635 HOXB7P09629 217 aa12.32□□□□□ -0.44
ZNF556-201ENST00000307635 KRT23Q9C075 422 aa12.32□□□□□ -0.44
ZNF556-201ENST00000307635 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
ZNF556-201ENST00000307635 WDR66Q8TBY9 1149 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 JAKMIP1Q96N16 626 aaKnown RBP12.31□□□□□ -0.44
ZNF556-201ENST00000307635 AS3MTQ9HBK9 375 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 SLC4A4Q9Y6R1 1079 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 USP48Q86UV5 1035 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 DNAJC10Q8IXB1 793 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 DACH1Q9UI36 760 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 ADGRL3Q9HAR2 1447 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 FBXO41Q8TF61 875 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 ECHDC1Q9NTX5 307 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 NEK4P51957 841 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 MBD5Q9P267 1494 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 SPATA31A3Q5VYP0 1347 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 TET3O43151 1660 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 LOC102724428A0A0B4J2F2 783 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 SIK1P57059 783 aa12.31□□□□□ -0.44
ZNF556-201ENST00000307635 SSRP1Q08945 709 aaKnown RBP12.3□□□□□ -0.44
ZNF556-201ENST00000307635 DCAF15Q66K64 600 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 PPP1R12BO60237 982 aaPredicted RBP12.3□□□□□ -0.44
ZNF556-201ENST00000307635 PHKG2P15735 406 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 GLI2P10070 1586 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 PDIA4P13667 645 aaKnown RBP12.3□□□□□ -0.44
ZNF556-201ENST00000307635 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
ZNF556-201ENST00000307635 SDF4Q9BRK5 362 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 CNNM2Q9H8M5 875 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.447e-7■■■□□ 14.8
ZNF556-201ENST00000307635 ARHGAP31Q2M1Z3 1444 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 CCDC39Q9UFE4 941 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 SYNMO15061 1565 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 FILIP1LQ4L180 1135 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 SLC27A3Q5K4L6 730 aa12.3□□□□□ -0.44
ZNF556-201ENST00000307635 GNAQP50148 359 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 NCBP1Q09161 790 aaKnown RBP12.29□□□□□ -0.44
ZNF556-201ENST00000307635 SNRKQ9NRH2 765 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 IQSEC3Q9UPP2 1182 aaPredicted RBP12.29□□□□□ -0.44
ZNF556-201ENST00000307635 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
ZNF556-201ENST00000307635 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
ZNF556-201ENST00000307635 GOLGA8AA7E2F4 631 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 GOLGA8BA8MQT2 603 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 PDE4AP27815 886 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 NAP1L1P55209 391 aaKnown RBP12.29□□□□□ -0.44
ZNF556-201ENST00000307635 NLRP5P59047 1200 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 TNS3Q68CZ2 1445 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 DDX49Q9Y6V7 483 aaKnown RBP12.29□□□□□ -0.44
ZNF556-201ENST00000307635 ADGRB3O60242 1522 aa12.29□□□□□ -0.44
ZNF556-201ENST00000307635 KINO60870 393 aaKnown RBP12.28□□□□□ -0.44
ZNF556-201ENST00000307635 POTEJP0CG39 1038 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 RARSP54136 660 aaKnown RBP12.28□□□□□ -0.44
ZNF556-201ENST00000307635 CCDC93Q567U6 631 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 GRIN3BO60391 1043 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 NEBLO76041 1014 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 SLC4A8Q2Y0W8 1093 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 ABT1Q9ULW3 272 aaKnown RBP12.28□□□□□ -0.44
ZNF556-201ENST00000307635 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 PUM3Q15397 648 aaKnown RBP12.28□□□□□ -0.44
ZNF556-201ENST00000307635 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
ZNF556-201ENST00000307635 SAMM50Q9Y512 469 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 CC2D2BQ6DHV5 1058 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 ESR2Q92731 530 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 METTL22Q9BUU2 404 aaPredicted RBP12.28□□□□□ -0.44
ZNF556-201ENST00000307635 NOD1Q9Y239 953 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 PPEF1O14829 653 aaPredicted RBP12.28□□□□□ -0.44
ZNF556-201ENST00000307635 ARMC9Q7Z3E5 817 aa12.28□□□□□ -0.44
ZNF556-201ENST00000307635 GZF1Q9H116 711 aaPredicted RBP12.28□□□□□ -0.44
ZNF556-201ENST00000307635 ITGA6P23229 1130 aa12.27□□□□□ -0.44
ZNF556-201ENST00000307635 CEP57L1Q8IYX8 460 aa12.27□□□□□ -0.44
ZNF556-201ENST00000307635 ARHGEF40Q8TER5 1519 aa12.27□□□□□ -0.44
ZNF556-201ENST00000307635 TMEM67Q5HYA8 995 aa12.27□□□□□ -0.44
ZNF556-201ENST00000307635 TEX11Q8IYF3 940 aa12.27□□□□□ -0.44
ZNF556-201ENST00000307635 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.44
ZNF556-201ENST00000307635 MYOM2P54296 1465 aa12.27□□□□□ -0.44
ZNF556-201ENST00000307635 HCLS1P14317 486 aaPredicted RBP12.27□□□□□ -0.45
ZNF556-201ENST00000307635 CKAP2LQ8IYA6 745 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 VAT1LQ9HCJ6 419 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 ATP7BP35670 1465 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 IRX3P78415 501 aaPredicted RBP12.27□□□□□ -0.45
ZNF556-201ENST00000307635 MAP3K9P80192 1104 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 ROBO2Q9HCK4 1378 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 HSP90AA2PQ14568 343 aaPredicted RBP12.27□□□□□ -0.45
ZNF556-201ENST00000307635 STXBP4Q6ZWJ1 553 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 RTKN2Q8IZC4 609 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 TNPO1Q92973 898 aaKnown RBP12.27□□□□□ -0.45
ZNF556-201ENST00000307635 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 INSRP06213 1382 aa12.27□□□□□ -0.45
ZNF556-201ENST00000307635 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms