RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CCT4P50991 539 aaKnown RBP13.89□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 ARHGAP27Q6ZUM4 889 aa13.89□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 ARHGAP45Q92619 1136 aa13.89□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 CRAMP1Q96RY5 1269 aa13.89□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 H7C1W4 665 aa13.88□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 CTSWP56202 376 aa13.88□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 GRAPQ13588 217 aa13.88□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 SF3B3Q15393 1217 aaKnown RBP13.88□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 CCDC93Q567U6 631 aa13.88□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 ZKSCAN2Q63HK3 967 aa13.88□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 CCDC85AQ96PX6 553 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 RCAN3Q9UKA8 241 aa13.86□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 BBOX1O75936 387 aa13.85□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 TRIM27P14373 513 aa13.85□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 CASP7P55210 303 aa13.85□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 CC2D2BQ6DHV5 1058 aa13.85□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 CDC5LQ99459 802 aaKnown RBP13.85□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 CHMP3Q9Y3E7 222 aa13.85□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 RASSF7Q02833 373 aa13.84□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 GRIPAP1Q4V328 841 aa13.84□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 RTKN2Q8IZC4 609 aa13.84□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 CLUAP1Q96AJ1 413 aa13.84□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 TAOK3Q9H2K8 898 aa13.84□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 RTL9Q8NET4 1388 aa13.83□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 A0A1B0GUL6 1792 aa13.83□□□□□ -0.19
CSPG4P1Y-201ENST00000306641 UBTFL1P0CB47 393 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 MS4A1P11836 297 aa13.83□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 YY1P25490 414 aa13.83□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 HDAC5Q9UQL6 1122 aa13.83□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 UTYO14607 1347 aa13.83□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 LTBP3Q9NS15 1303 aa13.83□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 COL4A1P02462 1669 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 NFKBIEO00221 500 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 NBPF7P0C2Y1 421 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 ITGA6P23229 1130 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 FKBP4Q02790 459 aaKnown RBP eCLIP13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 TAF7LQ5H9L4 462 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 C7orf43Q8WVR3 580 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 CELF1Q92879 486 aaKnown RBP13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 SUCLG2Q96I99 432 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 GREM2Q9H772 168 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 SEC31BQ9NQW1 1179 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 RNF181Q9P0P0 153 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 ATP6V0A2Q9Y487 856 aa13.82□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 ANKRD18BA2A2Z9 1011 aa13.81□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 LMNB1P20700 586 aa13.81□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 RPS8P62241 208 aaKnown RBP13.81□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 CCDC57Q2TAC2 916 aa13.81□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 INTS3Q68E01 1043 aaKnown RBP13.81□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 OLFM4Q6UX06 510 aa13.81□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 SP8Q8IXZ3 490 aa13.81□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 LTBP1Q14766 1721 aa13.81□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 CSF1RP07333 972 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 GNAI3P08754 354 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 FOXO4P98177 505 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 C9orf131Q5VYM1 1079 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 LMBR1LQ6UX01 489 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 DPP8Q6V1X1 898 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 ITPRIPQ8IWB1 547 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 TMEM57Q8N5G2 664 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 SUPT20HQ8NEM7 779 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 MPHOSPH8Q99549 860 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 USP44Q9H0E7 712 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 BICC1Q9H694 974 aaKnown RBP13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 TNNQ9UQP3 1299 aa13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 GOLGB1Q14789 3259 aaKnown RBP13.8□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 MPNDQ8N594 471 aa13.79□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 PSMD1Q99460 953 aa13.79□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 SNED1Q8TER0 1413 aa13.79□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 EPHA10Q5JZY3 1008 aa13.78□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 MEIS3Q99687 375 aa13.78□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 DUOX1Q9NRD9 1551 aa13.78□□□□□ -0.2
CSPG4P1Y-201ENST00000306641 IARSP41252 1262 aaKnown RBP13.77□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 ANKIB1Q9P2G1 1089 aa13.77□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 NSFL1CQ9UNZ2 370 aaKnown RBP13.77□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 UTRNP46939 3433 aa13.77□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 XDHP47989 1333 aa13.76□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 PPIP5K2O43314 1243 aa13.76□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 RABL6Q3YEC7 729 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 SLC51AQ86UW1 340 aa13.76□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 KAZALD1Q96I82 304 aa13.76□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 EYA3Q99504 573 aa13.76□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 LRRFIP2Q9Y608 721 aaKnown RBP13.76□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 C6orf229H3BNL8 230 aa13.75□□□□□ -0.21
CSPG4P1Y-201ENST00000306641 PLIN1O60240 522 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms