RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZNF521Q96K83 1311 aa33.85■■■■□ 3.01
CDKN2A-201ENST00000304494 CCER2I3L3R5 266 aa33.85■■■■□ 3.01
CDKN2A-201ENST00000304494 FLIIQ13045 1269 aa33.85■■■■□ 3.01
CDKN2A-201ENST00000304494 SUPT20HQ8NEM7 779 aa33.84■■■■□ 3.01
CDKN2A-201ENST00000304494 VPS33BQ9H267 617 aa33.84■■■■□ 3.01
CDKN2A-201ENST00000304494 POTECB2RU33 542 aa33.83■■■■□ 3.01
CDKN2A-201ENST00000304494 FZD9O00144 591 aa33.83■■■■□ 3.01
CDKN2A-201ENST00000304494 SLC51AQ86UW1 340 aa33.83■■■■□ 3.01
CDKN2A-201ENST00000304494 SMC1BQ8NDV3 1235 aa33.83■■■■□ 3.01
CDKN2A-201ENST00000304494 DPP8Q6V1X1 898 aaPredicted RBP33.82■■■■□ 3
CDKN2A-201ENST00000304494 LARGE2Q8N3Y3 721 aa33.82■■■■□ 3
CDKN2A-201ENST00000304494 ZNF541Q9H0D2 1346 aa33.81■■■■□ 3
CDKN2A-201ENST00000304494 IGKV5-2P06315 115 aa33.81■■■■□ 3
CDKN2A-201ENST00000304494 FKBP5Q13451 457 aaPredicted RBP33.81■■■■□ 3
CDKN2A-201ENST00000304494 MPNDQ8N594 471 aa33.81■■■■□ 3
CDKN2A-201ENST00000304494 RTFDC1Q9BY42 306 aaPredicted RBP33.81■■■■□ 3
CDKN2A-201ENST00000304494 IQCA1LA6NCM1 817 aa33.8■■■■□ 3
CDKN2A-201ENST00000304494 PDE8AO60658 829 aa33.8■■■■□ 3
CDKN2A-201ENST00000304494 L3MBTL3Q96JM7 780 aaPredicted RBP33.8■■■■□ 3
CDKN2A-201ENST00000304494 CACNA1FO60840 1977 aa33.8■■■■□ 3
CDKN2A-201ENST00000304494 CDHR2Q9BYE9 1310 aa33.79■■■■□ 3
CDKN2A-201ENST00000304494 PPIP5K2O43314 1243 aa33.78■■■■□ 3
CDKN2A-201ENST00000304494 EIF6P56537 245 aaKnown RBP33.78■■■■□ 3
CDKN2A-201ENST00000304494 CCDC152Q4G0S7 254 aa33.78■■■■□ 3
CDKN2A-201ENST00000304494 CELF1Q92879 486 aaKnown RBP33.78■■■■□ 3
CDKN2A-201ENST00000304494 NEURL1BA8MQ27 555 aa33.77■■■■□ 3
CDKN2A-201ENST00000304494 APLP1P51693 650 aa33.77■■■■□ 3
CDKN2A-201ENST00000304494 GPC2Q8N158 579 aa33.77■■■■□ 3
CDKN2A-201ENST00000304494 CWF19L2Q2TBE0 894 aaKnown RBP33.76■■■□□ 2.99
CDKN2A-201ENST00000304494 NIM1KQ8IY84 436 aa33.76■■■□□ 2.99
CDKN2A-201ENST00000304494 DNAAF4Q8WXU2 420 aa33.76■■■□□ 2.99
CDKN2A-201ENST00000304494 COL4A5P29400 1685 aa33.75■■■□□ 2.99
CDKN2A-201ENST00000304494 AOC3Q16853 763 aa33.75■■■□□ 2.99
CDKN2A-201ENST00000304494 JARID2Q92833 1246 aaPredicted RBP33.75■■■□□ 2.99
CDKN2A-201ENST00000304494 CEP350Q5VT06 3117 aa33.75■■■□□ 2.99
CDKN2A-201ENST00000304494 LRRC37AA6NMS7 1700 aa33.75■■■□□ 2.99
CDKN2A-201ENST00000304494 TAF1P21675 1872 aa33.75■■■□□ 2.99
CDKN2A-201ENST00000304494 RPS8P62241 208 aaKnown RBP33.74■■■□□ 2.99
CDKN2A-201ENST00000304494 E9PSI1 815 aa33.73■■■□□ 2.99
CDKN2A-201ENST00000304494 SCN4AP35499 1836 aa33.72■■■□□ 2.99
CDKN2A-201ENST00000304494 LINS1Q8NG48 757 aa33.72■■■□□ 2.99
CDKN2A-201ENST00000304494 CTSWP56202 376 aa33.7■■■□□ 2.99
CDKN2A-201ENST00000304494 KIAA2012Q0VF49 1180 aa33.7■■■□□ 2.99
CDKN2A-201ENST00000304494 GCKRQ14397 625 aa33.7■■■□□ 2.99
CDKN2A-201ENST00000304494 SEC31BQ9NQW1 1179 aa33.7■■■□□ 2.99
CDKN2A-201ENST00000304494 HACL1Q9UJ83 578 aa33.7■■■□□ 2.99
CDKN2A-201ENST00000304494 H7C1W4 665 aa33.69■■■□□ 2.98
CDKN2A-201ENST00000304494 TAF1DQ9H5J8 278 aaPredicted RBP33.69■■■□□ 2.98
CDKN2A-201ENST00000304494 NSFL1CQ9UNZ2 370 aaKnown RBP33.69■■■□□ 2.98
CDKN2A-201ENST00000304494 GJA3Q9Y6H8 435 aa33.69■■■□□ 2.98
CDKN2A-201ENST00000304494 ZNRF3Q9ULT6 936 aa33.68■■■□□ 2.98
CDKN2A-201ENST00000304494 UBE3BQ7Z3V4 1068 aa33.67■■■□□ 2.98
CDKN2A-201ENST00000304494 CCDC85AQ96PX6 553 aaPredicted RBP33.67■■■□□ 2.98
CDKN2A-201ENST00000304494 DUOX1Q9NRD9 1551 aa33.67■■■□□ 2.98
CDKN2A-201ENST00000304494 COL4A1P02462 1669 aa33.67■■■□□ 2.98
CDKN2A-201ENST00000304494 GPSM2P81274 684 aa33.65■■■□□ 2.98
CDKN2A-201ENST00000304494 CHADLQ6NUI6 762 aa33.65■■■□□ 2.98
CDKN2A-201ENST00000304494 ANKRD18AQ8IVF6 992 aa33.65■■■□□ 2.98
CDKN2A-201ENST00000304494 TTLL11Q8NHH1 800 aa33.65■■■□□ 2.98
CDKN2A-201ENST00000304494 CDC5LQ99459 802 aaKnown RBP33.65■■■□□ 2.98
CDKN2A-201ENST00000304494 EPHX2P34913 555 aa33.64■■■□□ 2.98
CDKN2A-201ENST00000304494 SLFN5Q08AF3 891 aa33.64■■■□□ 2.98
CDKN2A-201ENST00000304494 WASHC4Q2M389 1173 aa33.64■■■□□ 2.98
CDKN2A-201ENST00000304494 PNMA8AQ86V59 439 aaPredicted RBP33.64■■■□□ 2.98
CDKN2A-201ENST00000304494 LDHDQ86WU2 507 aa33.64■■■□□ 2.98
CDKN2A-201ENST00000304494 F6X3S4 739 aa33.63■■■□□ 2.97
CDKN2A-201ENST00000304494 LMOD1P29536 600 aaPredicted RBP33.63■■■□□ 2.97
CDKN2A-201ENST00000304494 EYA3Q99504 573 aa33.63■■■□□ 2.97
CDKN2A-201ENST00000304494 RTL9Q8NET4 1388 aa33.62■■■□□ 2.97
CDKN2A-201ENST00000304494 C6orf229H3BNL8 230 aa33.62■■■□□ 2.97
CDKN2A-201ENST00000304494 PLA2G12BQ9BX93 195 aa33.62■■■□□ 2.97
CDKN2A-201ENST00000304494 PODXL2Q9NZ53 605 aa33.62■■■□□ 2.97
CDKN2A-201ENST00000304494 POTEIP0CG38 1075 aa33.61■■■□□ 2.97
CDKN2A-201ENST00000304494 POTEJP0CG39 1038 aa33.61■■■□□ 2.97
CDKN2A-201ENST00000304494 BEND3Q5T5X7 828 aa33.61■■■□□ 2.97
CDKN2A-201ENST00000304494 POLLQ9UGP5 575 aa33.61■■■□□ 2.97
CDKN2A-201ENST00000304494 MYH3P11055 1940 aa33.6■■■□□ 2.97
CDKN2A-201ENST00000304494 EAPPQ56P03 285 aaPredicted RBP33.6■■■□□ 2.97
CDKN2A-201ENST00000304494 TBC1D16Q8TBP0 767 aa33.6■■■□□ 2.97
CDKN2A-201ENST00000304494 GREM2Q9H772 168 aa33.6■■■□□ 2.97
CDKN2A-201ENST00000304494 ANKIB1Q9P2G1 1089 aa33.6■■■□□ 2.97
CDKN2A-201ENST00000304494 LTBP1Q14766 1721 aa33.59■■■□□ 2.97
CDKN2A-201ENST00000304494 CASP7P55210 303 aa33.59■■■□□ 2.97
CDKN2A-201ENST00000304494 CXCL9Q07325 125 aa33.59■■■□□ 2.97
CDKN2A-201ENST00000304494 SCNN1DP51172 638 aa33.58■■■□□ 2.97
CDKN2A-201ENST00000304494 TNIP1Q15025 636 aa33.58■■■□□ 2.97
CDKN2A-201ENST00000304494 DIEXFQ68CQ4 756 aaKnown RBP33.57■■■□□ 2.96
CDKN2A-201ENST00000304494 CIAPIN1Q6FI81 312 aa33.57■■■□□ 2.96
CDKN2A-201ENST00000304494 GGA1Q9UJY5 639 aa33.57■■■□□ 2.96
CDKN2A-201ENST00000304494 CDCA7LQ96GN5 454 aa33.56■■■□□ 2.96
CDKN2A-201ENST00000304494 RIMBP2O15034 1052 aa33.55■■■□□ 2.96
CDKN2A-201ENST00000304494 UFL1O94874 794 aa33.55■■■□□ 2.96
CDKN2A-201ENST00000304494 ZC3H12CQ9C0D7 883 aaKnown RBP33.55■■■□□ 2.96
CDKN2A-201ENST00000304494 BSDC1Q9NW68 430 aaPredicted RBP33.55■■■□□ 2.96
CDKN2A-201ENST00000304494 CLEC11AQ9Y240 323 aa33.55■■■□□ 2.96
CDKN2A-201ENST00000304494 XDHP47989 1333 aa33.54■■■□□ 2.96
CDKN2A-201ENST00000304494 SLC4A10Q6U841 1118 aa33.54■■■□□ 2.96
CDKN2A-201ENST00000304494 MRPL50Q8N5N7 158 aaKnown RBP33.54■■■□□ 2.96
CDKN2A-201ENST00000304494 ALDH1L1O75891 902 aa33.53■■■□□ 2.96
CDKN2A-201ENST00000304494 RAD17O75943 681 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms