RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 GJB2P29033 226 aa22.36■■□□□ 1.17
RNF139-201ENST00000303545 ST3GAL1Q11201 340 aa22.36■■□□□ 1.17
RNF139-201ENST00000303545 VPS53Q5VIR6 699 aa22.36■■□□□ 1.17
RNF139-201ENST00000303545 H7C1W4 665 aa22.35■■□□□ 1.17
RNF139-201ENST00000303545 LRRC24Q50LG9 513 aa22.35■■□□□ 1.17
RNF139-201ENST00000303545 CARD10Q9BWT7 1032 aa22.35■■□□□ 1.17
RNF139-201ENST00000303545 TPCN1Q9ULQ1 816 aa22.35■■□□□ 1.17
RNF139-201ENST00000303545 PARP4Q9UKK3 1724 aaKnown RBP22.35■■□□□ 1.17
RNF139-201ENST00000303545 COL15A1P39059 1388 aa22.35■■□□□ 1.17
RNF139-201ENST00000303545 STX6O43752 255 aa22.35■■□□□ 1.17
RNF139-201ENST00000303545 ATP5JP18859 108 aa22.35■■□□□ 1.17
RNF139-201ENST00000303545 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.35■■□□□ 1.17
RNF139-201ENST00000303545 LAMB4A4D0S4 1761 aa22.34■■□□□ 1.17
RNF139-201ENST00000303545 ERBB4Q15303 1308 aa22.34■■□□□ 1.17
RNF139-201ENST00000303545 ZSCAN22P10073 491 aaPredicted RBP22.34■■□□□ 1.17
RNF139-201ENST00000303545 TRIM44Q96DX7 344 aaPredicted RBP22.34■■□□□ 1.17
RNF139-201ENST00000303545 ASAP1Q9ULH1 1129 aa22.34■■□□□ 1.17
RNF139-201ENST00000303545 STK3Q13188 491 aa22.33■■□□□ 1.17
RNF139-201ENST00000303545 KCNB2Q92953 911 aa22.33■■□□□ 1.17
RNF139-201ENST00000303545 PUS3Q9BZE2 481 aaKnown RBP22.33■■□□□ 1.17
RNF139-201ENST00000303545 ATG9AQ7Z3C6 839 aa22.33■■□□□ 1.16
RNF139-201ENST00000303545 KCPQ6ZWJ8 1503 aa22.33■■□□□ 1.16
RNF139-201ENST00000303545 MED23Q9ULK4 1368 aa22.33■■□□□ 1.16
RNF139-201ENST00000303545 TAF5LO75529 589 aa22.32■■□□□ 1.16
RNF139-201ENST00000303545 RNF214Q8ND24 703 aa22.32■■□□□ 1.16
RNF139-201ENST00000303545 STRCQ7RTU9 1775 aa22.32■■□□□ 1.16
RNF139-201ENST00000303545 TM6SF1Q9BZW5 370 aa22.32■■□□□ 1.16
RNF139-201ENST00000303545 TMOD3Q9NYL9 352 aa22.32■■□□□ 1.16
RNF139-201ENST00000303545 VPS37CA5D8V6 355 aaPredicted RBP22.31■■□□□ 1.16
RNF139-201ENST00000303545 GOLIM4O00461 696 aa22.31■■□□□ 1.16
RNF139-201ENST00000303545 FIBPO43427 364 aa22.31■■□□□ 1.16
RNF139-201ENST00000303545 BLOC1S2Q6QNY1 142 aa22.31■■□□□ 1.16
RNF139-201ENST00000303545 ZNF609O15014 1411 aa22.31■■□□□ 1.16
RNF139-201ENST00000303545 NKX1-1Q15270 411 aaPredicted RBP22.3■■□□□ 1.16
RNF139-201ENST00000303545 DNAJC10Q8IXB1 793 aa22.3■■□□□ 1.16
RNF139-201ENST00000303545 BTG4Q9NY30 223 aa22.3■■□□□ 1.16
RNF139-201ENST00000303545 MBD3O95983 291 aa22.29■■□□□ 1.16
RNF139-201ENST00000303545 F13A1P00488 732 aa22.29■■□□□ 1.16
RNF139-201ENST00000303545 LRSAM1Q6UWE0 723 aa22.29■■□□□ 1.16
RNF139-201ENST00000303545 SYNE4Q8N205 404 aa22.29■■□□□ 1.16
RNF139-201ENST00000303545 HAUS7Q99871 368 aa22.29■■□□□ 1.16
RNF139-201ENST00000303545 RNF20Q5VTR2 975 aa22.28■■□□□ 1.16
RNF139-201ENST00000303545 PIGBQ92521 554 aa22.28■■□□□ 1.16
RNF139-201ENST00000303545 FAM89AQ96GI7 184 aa22.28■■□□□ 1.16
RNF139-201ENST00000303545 SHANK3Q9BYB0 1731 aa22.28■■□□□ 1.16
RNF139-201ENST00000303545 KDM4FA0A1W2PPD8 638 aa22.28■■□□□ 1.16
RNF139-201ENST00000303545 PSMA5P28066 241 aa22.28■■□□□ 1.16
RNF139-201ENST00000303545 ANP32BQ92688 251 aaKnown RBP22.28■■□□□ 1.16
RNF139-201ENST00000303545 LRRC2Q9BYS8 371 aa22.28■■□□□ 1.16
RNF139-201ENST00000303545 SNRKQ9NRH2 765 aa22.28■■□□□ 1.16
RNF139-201ENST00000303545 UBR2Q8IWV8 1755 aa22.28■■□□□ 1.16
RNF139-201ENST00000303545 FERMT3Q86UX7 667 aa22.27■■□□□ 1.16
RNF139-201ENST00000303545 ZSCAN31Q96LW9 406 aaPredicted RBP22.27■■□□□ 1.16
RNF139-201ENST00000303545 RPS6KB1P23443 525 aa22.27■■□□□ 1.16
RNF139-201ENST00000303545 DNM1Q05193 864 aaKnown RBP22.27■■□□□ 1.16
RNF139-201ENST00000303545 CCDC191Q8NCU4 936 aa22.27■■□□□ 1.16
RNF139-201ENST00000303545 NUP188Q5SRE5 1749 aa22.27■■□□□ 1.16
RNF139-201ENST00000303545 TOB2Q14106 344 aaPredicted RBP22.27■■□□□ 1.15
RNF139-201ENST00000303545 SH2B1Q9NRF2 756 aaPredicted RBP22.27■■□□□ 1.15
RNF139-201ENST00000303545 MTMR6Q9Y217 621 aa22.27■■□□□ 1.15
RNF139-201ENST00000303545 TJP1Q07157 1748 aa22.26■■□□□ 1.15
RNF139-201ENST00000303545 ESPNB1AK53 854 aa22.26■■□□□ 1.15
RNF139-201ENST00000303545 SYTL4Q96C24 671 aaPredicted RBP22.26■■□□□ 1.15
RNF139-201ENST00000303545 A0A0G2JLW4 131 aa22.26■■□□□ 1.15
RNF139-201ENST00000303545 GPTP24298 496 aa22.26■■□□□ 1.15
RNF139-201ENST00000303545 CCDC173Q0VFZ6 552 aa22.26■■□□□ 1.15
RNF139-201ENST00000303545 FAM173BQ6P4H8 233 aa22.26■■□□□ 1.15
RNF139-201ENST00000303545 ABCA3Q99758 1704 aa22.25■■□□□ 1.15
RNF139-201ENST00000303545 PAG1Q9NWQ8 432 aa22.25■■□□□ 1.15
RNF139-201ENST00000303545 PLEKHG2Q9H7P9 1386 aa22.25■■□□□ 1.15
RNF139-201ENST00000303545 TOGARAM1Q9Y4F4 1720 aa22.25■■□□□ 1.15
RNF139-201ENST00000303545 EYA2O00167 538 aa22.25■■□□□ 1.15
RNF139-201ENST00000303545 MCMDC2Q4G0Z9 681 aa22.25■■□□□ 1.15
RNF139-201ENST00000303545 A0A0G2JS52 829 aa22.24■■□□□ 1.15
RNF139-201ENST00000303545 A0A1B0GUL7 405 aa22.24■■□□□ 1.15
RNF139-201ENST00000303545 LARP1BQ659C4 914 aaKnown RBP22.24■■□□□ 1.15
RNF139-201ENST00000303545 CYP21A2P08686 494 aa22.23■■□□□ 1.15
RNF139-201ENST00000303545 IL15P40933 162 aaPredicted RBP22.23■■□□□ 1.15
RNF139-201ENST00000303545 KBTBD3Q8NAB2 608 aa22.23■■□□□ 1.15
RNF139-201ENST00000303545 CDC37L1Q7L3B6 337 aa22.23■■□□□ 1.15
RNF139-201ENST00000303545 ATG3Q9NT62 314 aa22.23■■□□□ 1.15
RNF139-201ENST00000303545 ADORA1P30542 326 aa22.22■■□□□ 1.15
RNF139-201ENST00000303545 FKBP4Q02790 459 aaKnown RBP eCLIP22.22■■□□□ 1.15
RNF139-201ENST00000303545 TCIRG1Q13488 830 aa22.22■■□□□ 1.15
RNF139-201ENST00000303545 HLFQ16534 295 aa22.22■■□□□ 1.15
RNF139-201ENST00000303545 PPP1R9BQ96SB3 815 aa22.22■■□□□ 1.15
RNF139-201ENST00000303545 IFIT1P09914 478 aaKnown RBP22.22■■□□□ 1.15
RNF139-201ENST00000303545 CCDC57Q2TAC2 916 aa22.22■■□□□ 1.15
RNF139-201ENST00000303545 NEK1Q96PY6 1258 aa22.22■■□□□ 1.15
RNF139-201ENST00000303545 ISCA1Q9BUE6 129 aa22.21■■□□□ 1.15
RNF139-201ENST00000303545 PAPPAQ13219 1627 aa22.21■■□□□ 1.15
RNF139-201ENST00000303545 TNS2Q63HR2 1409 aa22.21■■□□□ 1.15
RNF139-201ENST00000303545 PPFIA3O75145 1194 aa22.21■■□□□ 1.15
RNF139-201ENST00000303545 HSP90B1P14625 803 aaKnown RBP22.21■■□□□ 1.15
RNF139-201ENST00000303545 Q6ZUG5 572 aa22.21■■□□□ 1.15
RNF139-201ENST00000303545 JCADQ9P266 1359 aa22.2■■□□□ 1.15
RNF139-201ENST00000303545 HSP90AB3PQ58FF7 597 aa22.2■■□□□ 1.14
RNF139-201ENST00000303545 USPL1Q5W0Q7 1092 aa22.2■■□□□ 1.14
RNF139-201ENST00000303545 KIF6Q6ZMV9 814 aa22.2■■□□□ 1.14
RNF139-201ENST00000303545 STOX1Q6ZVD7 989 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms