RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 H0YIN7 160 aa25.18■■□□□ 1.62
SCAMP3-201ENST00000302631 DPEP1P16444 411 aa25.18■■□□□ 1.62
SCAMP3-201ENST00000302631 C2CD5Q86YS7 1000 aa25.18■■□□□ 1.62
SCAMP3-201ENST00000302631 RTL9Q8NET4 1388 aa25.17■■□□□ 1.62
SCAMP3-201ENST00000302631 CHRNA5P30532 468 aa25.17■■□□□ 1.62
SCAMP3-201ENST00000302631 NLGN2Q8NFZ4 835 aa25.17■■□□□ 1.62
SCAMP3-201ENST00000302631 MASTLQ96GX5 879 aa25.17■■□□□ 1.62
SCAMP3-201ENST00000302631 NPR1P16066 1061 aa25.16■■□□□ 1.62
SCAMP3-201ENST00000302631 STYK1Q6J9G0 422 aa25.16■■□□□ 1.62
SCAMP3-201ENST00000302631 ANKRD44Q8N8A2 993 aa25.16■■□□□ 1.62
SCAMP3-201ENST00000302631 ZBTB40Q9NUA8 1239 aa25.16■■□□□ 1.62
SCAMP3-201ENST00000302631 A0A0G2JLW4 131 aa25.15■■□□□ 1.62
SCAMP3-201ENST00000302631 CRAMP1Q96RY5 1269 aa25.15■■□□□ 1.62
SCAMP3-201ENST00000302631 CHMP4BQ9H444 224 aaKnown RBP25.15■■□□□ 1.62
SCAMP3-201ENST00000302631 BICC1Q9H694 974 aaKnown RBP25.15■■□□□ 1.62
SCAMP3-201ENST00000302631 TAF1P21675 1872 aa25.15■■□□□ 1.62
SCAMP3-201ENST00000302631 CCDC152Q4G0S7 254 aa25.14■■□□□ 1.62
SCAMP3-201ENST00000302631 KLHL34Q8N239 644 aa25.14■■□□□ 1.62
SCAMP3-201ENST00000302631 LRRFIP2Q9Y608 721 aaKnown RBP25.14■■□□□ 1.62
SCAMP3-201ENST00000302631 GNAI2P04899 355 aa25.13■■□□□ 1.61
SCAMP3-201ENST00000302631 LMBR1LQ6UX01 489 aa25.12■■□□□ 1.61
SCAMP3-201ENST00000302631 RBM17Q96I25 401 aaKnown RBP25.12■■□□□ 1.61
SCAMP3-201ENST00000302631 MTX1Q13505 466 aa25.12■■□□□ 1.61
SCAMP3-201ENST00000302631 RPGRQ92834 1020 aaKnown RBP25.12■■□□□ 1.61
SCAMP3-201ENST00000302631 CRBNQ96SW2 442 aa25.12■■□□□ 1.61
SCAMP3-201ENST00000302631 GREM2Q9H772 168 aa25.12■■□□□ 1.61
SCAMP3-201ENST00000302631 SRCAPQ6ZRS2 3230 aa25.11■■□□□ 1.61
SCAMP3-201ENST00000302631 SLX4Q8IY92 1834 aa25.11■■□□□ 1.61
SCAMP3-201ENST00000302631 ALDH1B1P30837 517 aa25.11■■□□□ 1.61
SCAMP3-201ENST00000302631 CNKSR1Q969H4 720 aa25.11■■□□□ 1.61
SCAMP3-201ENST00000302631 PIM2Q9P1W9 311 aa25.11■■□□□ 1.61
SCAMP3-201ENST00000302631 COL4A1P02462 1669 aa25.1■■□□□ 1.61
SCAMP3-201ENST00000302631 CACNA1SQ13698 1873 aa25.1■■□□□ 1.61
SCAMP3-201ENST00000302631 DDX46Q7L014 1031 aaKnown RBP25.1■■□□□ 1.61
SCAMP3-201ENST00000302631 ARFGEF1Q9Y6D6 1849 aa25.09■■□□□ 1.61
SCAMP3-201ENST00000302631 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
SCAMP3-201ENST00000302631 ZNF622Q969S3 477 aaKnown RBP eCLIP25.09■■□□□ 1.61
SCAMP3-201ENST00000302631 SEC31BQ9NQW1 1179 aa25.09■■□□□ 1.61
SCAMP3-201ENST00000302631 GRAPQ13588 217 aa25.08■■□□□ 1.61
SCAMP3-201ENST00000302631 TTLL6Q8N841 843 aa25.08■■□□□ 1.61
SCAMP3-201ENST00000302631 GRAPLQ8TC17 118 aaPredicted RBP25.08■■□□□ 1.61
SCAMP3-201ENST00000302631 ITGA6P23229 1130 aa25.07■■□□□ 1.6
SCAMP3-201ENST00000302631 CCDC85AQ96PX6 553 aaPredicted RBP25.07■■□□□ 1.6
SCAMP3-201ENST00000302631 BBOX1O75936 387 aa25.06■■□□□ 1.6
SCAMP3-201ENST00000302631 RFX5P48382 616 aaPredicted RBP25.06■■□□□ 1.6
SCAMP3-201ENST00000302631 CELF1Q92879 486 aaKnown RBP25.06■■□□□ 1.6
SCAMP3-201ENST00000302631 ATP8B2P98198 1209 aa25.05■■□□□ 1.6
SCAMP3-201ENST00000302631 AAMPQ13685 434 aa25.05■■□□□ 1.6
SCAMP3-201ENST00000302631 C7orf43Q8WVR3 580 aa25.05■■□□□ 1.6
SCAMP3-201ENST00000302631 C1orf115Q9H7X2 142 aa25.05■■□□□ 1.6
SCAMP3-201ENST00000302631 ANKRD18BA2A2Z9 1011 aa25.04■■□□□ 1.6
SCAMP3-201ENST00000302631 RPS8P62241 208 aaKnown RBP25.04■■□□□ 1.6
SCAMP3-201ENST00000302631 IFIT5Q13325 482 aaKnown RBP25.04■■□□□ 1.6
SCAMP3-201ENST00000302631 PRPF40BQ6NWY9 871 aaKnown RBP25.04■■□□□ 1.6
SCAMP3-201ENST00000302631 CDC5LQ99459 802 aaKnown RBP25.04■■□□□ 1.6
SCAMP3-201ENST00000302631 LRRC37AA6NMS7 1700 aa25.04■■□□□ 1.6
SCAMP3-201ENST00000302631 CCDC57Q2TAC2 916 aa25.03■■□□□ 1.6
SCAMP3-201ENST00000302631 DALRD3Q5D0E6 543 aaKnown RBP25.03■■□□□ 1.6
SCAMP3-201ENST00000302631 CEP85Q6P2H3 762 aa25.03■■□□□ 1.6
SCAMP3-201ENST00000302631 TMC4Q7Z404 712 aa25.03■■□□□ 1.6
SCAMP3-201ENST00000302631 SPEF2Q9C093 1822 aa25.03■■□□□ 1.6
SCAMP3-201ENST00000302631 RPAP2Q8IXW5 612 aaPredicted RBP25.03■■□□□ 1.6
SCAMP3-201ENST00000302631 EXOC6Q8TAG9 804 aa25.03■■□□□ 1.6
SCAMP3-201ENST00000302631 CHMP3Q9Y3E7 222 aa25.03■■□□□ 1.6
SCAMP3-201ENST00000302631 PNMA6EA0A0J9YXQ4 647 aa25.02■■□□□ 1.6
SCAMP3-201ENST00000302631 POLA2Q14181 598 aa25.02■■□□□ 1.6
SCAMP3-201ENST00000302631 ANKRD18AQ8IVF6 992 aa25.02■■□□□ 1.6
SCAMP3-201ENST00000302631 SSH3Q8TE77 659 aa25.02■■□□□ 1.6
SCAMP3-201ENST00000302631 PTPN12Q05209 780 aaKnown RBP25.01■■□□□ 1.59
SCAMP3-201ENST00000302631 BSDC1Q9NW68 430 aaPredicted RBP25.01■■□□□ 1.59
SCAMP3-201ENST00000302631 SNED1Q8TER0 1413 aa25■■□□□ 1.59
SCAMP3-201ENST00000302631 PPEF1O14829 653 aaPredicted RBP25■■□□□ 1.59
SCAMP3-201ENST00000302631 SRGAP3O43295 1099 aa25■■□□□ 1.59
SCAMP3-201ENST00000302631 SP8Q8IXZ3 490 aa25■■□□□ 1.59
SCAMP3-201ENST00000302631 ATP6V0A2Q9Y487 856 aa25■■□□□ 1.59
SCAMP3-201ENST00000302631 SIRT2Q8IXJ6 389 aa24.99■■□□□ 1.59
SCAMP3-201ENST00000302631 ZNF594Q96JF6 807 aaPredicted RBP24.99■■□□□ 1.59
SCAMP3-201ENST00000302631 COPRSQ9NQ92 184 aa24.99■■□□□ 1.59
SCAMP3-201ENST00000302631 IGHMBP2P38935 993 aaKnown RBP24.98■■□□□ 1.59
SCAMP3-201ENST00000302631 IRX6P78412 446 aaPredicted RBP24.98■■□□□ 1.59
SCAMP3-201ENST00000302631 FBXO3Q9UK99 471 aa24.98■■□□□ 1.59
SCAMP3-201ENST00000302631 BCS1LQ9Y276 419 aa24.98■■□□□ 1.59
SCAMP3-201ENST00000302631 FER1L6Q2WGJ9 1857 aa24.98■■□□□ 1.59
SCAMP3-201ENST00000302631 CC2D2BQ6DHV5 1058 aa24.97■■□□□ 1.59
SCAMP3-201ENST00000302631 A0A1B0GUL6 1792 aa24.97■■□□□ 1.59
SCAMP3-201ENST00000302631 LTBP1Q14766 1721 aa24.97■■□□□ 1.59
SCAMP3-201ENST00000302631 PCDHB15Q9Y5E8 787 aa24.96■■□□□ 1.59
SCAMP3-201ENST00000302631 C21orf2O43822 256 aa24.95■■□□□ 1.59
SCAMP3-201ENST00000302631 YBX3P16989 372 aaKnown RBP eCLIP24.95■■□□□ 1.598e-7■■■□□ 18.5
SCAMP3-201ENST00000302631 SOGA3Q5TF21 947 aa24.95■■□□□ 1.59
SCAMP3-201ENST00000302631 KLHDC4Q8TBB5 520 aa24.95■■□□□ 1.59
SCAMP3-201ENST00000302631 MPHOSPH8Q99549 860 aa24.95■■□□□ 1.59
SCAMP3-201ENST00000302631 RIPOR2Q9Y4F9 1068 aa24.95■■□□□ 1.59
SCAMP3-201ENST00000302631 GRIPAP1Q4V328 841 aa24.95■■□□□ 1.58
SCAMP3-201ENST00000302631 LDHAL6AQ6ZMR3 332 aa24.95■■□□□ 1.58
SCAMP3-201ENST00000302631 SLC51AQ86UW1 340 aa24.95■■□□□ 1.58
SCAMP3-201ENST00000302631 WWC3Q9ULE0 1092 aa24.95■■□□□ 1.58
SCAMP3-201ENST00000302631 MINPP1Q9UNW1 487 aa24.95■■□□□ 1.58
SCAMP3-201ENST00000302631 TAF7LQ5H9L4 462 aa24.94■■□□□ 1.58
SCAMP3-201ENST00000302631 PUS3Q9BZE2 481 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms