RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TMEM94Q12767 1356 aa15.39■□□□□ 0.06
HIF3A-204ENST00000300862 PHF14O94880 888 aa15.39■□□□□ 0.05
HIF3A-204ENST00000300862 CCDC183Q5T5S1 534 aa15.39■□□□□ 0.05
HIF3A-204ENST00000300862 HCLS1P14317 486 aaPredicted RBP15.39■□□□□ 0.05
HIF3A-204ENST00000300862 SLFNL1Q499Z3 407 aa15.39■□□□□ 0.05
HIF3A-204ENST00000300862 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.05
HIF3A-204ENST00000300862 GIMAP6Q6P9H5 292 aa15.39■□□□□ 0.05
HIF3A-204ENST00000300862 COPRSQ9NQ92 184 aa15.39■□□□□ 0.05
HIF3A-204ENST00000300862 COL15A1P39059 1388 aa15.39■□□□□ 0.05
HIF3A-204ENST00000300862 CDC37L1Q7L3B6 337 aa15.38■□□□□ 0.05
HIF3A-204ENST00000300862 ADAMTSL3P82987 1691 aa15.38■□□□□ 0.05
HIF3A-204ENST00000300862 ADAMTS7Q9UKP4 1686 aa15.38■□□□□ 0.05
HIF3A-204ENST00000300862 MED23Q9ULK4 1368 aa15.38■□□□□ 0.05
HIF3A-204ENST00000300862 TAF5LO75529 589 aa15.38■□□□□ 0.05
HIF3A-204ENST00000300862 PSMA5P28066 241 aa15.38■□□□□ 0.05
HIF3A-204ENST00000300862 LMBR1LQ6UX01 489 aa15.38■□□□□ 0.05
HIF3A-204ENST00000300862 DDX46Q7L014 1031 aaKnown RBP15.38■□□□□ 0.05
HIF3A-204ENST00000300862 ATP6V1DQ9Y5K8 247 aa15.38■□□□□ 0.05
HIF3A-204ENST00000300862 SCN11AQ9UI33 1791 aa15.38■□□□□ 0.05
HIF3A-204ENST00000300862 PTMAP06454 111 aaKnown RBP15.37■□□□□ 0.05
HIF3A-204ENST00000300862 TOB2Q14106 344 aaPredicted RBP15.37■□□□□ 0.05
HIF3A-204ENST00000300862 RNF20Q5VTR2 975 aa15.37■□□□□ 0.05
HIF3A-204ENST00000300862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.37■□□□□ 0.05
HIF3A-204ENST00000300862 USP25Q9UHP3 1055 aa15.37■□□□□ 0.05
HIF3A-204ENST00000300862 RPS6KB1P23443 525 aa15.37■□□□□ 0.05
HIF3A-204ENST00000300862 SNRKQ9NRH2 765 aa15.37■□□□□ 0.05
HIF3A-204ENST00000300862 ZKSCAN5Q9Y2L8 839 aa15.37■□□□□ 0.05
HIF3A-204ENST00000300862 MST1RQ04912 1400 aa15.37■□□□□ 0.05
HIF3A-204ENST00000300862 NBPF26B4DH59 902 aa15.36■□□□□ 0.05
HIF3A-204ENST00000300862 ATP5JP18859 108 aa15.36■□□□□ 0.05
HIF3A-204ENST00000300862 NBPF14Q5TI25 921 aa15.36■□□□□ 0.05
HIF3A-204ENST00000300862 NBPF10Q6P3W6 841 aaKnown RBP15.36■□□□□ 0.05
HIF3A-204ENST00000300862 TTLL7Q6ZT98 887 aa15.36■□□□□ 0.05
HIF3A-204ENST00000300862 NBPF15Q8N660 670 aa15.36■□□□□ 0.05
HIF3A-204ENST00000300862 ALS2Q96Q42 1657 aa15.36■□□□□ 0.05
HIF3A-204ENST00000300862 RABL6Q3YEC7 729 aaPredicted RBP15.35■□□□□ 0.05
HIF3A-204ENST00000300862 NEUROD6Q96NK8 337 aa15.35■□□□□ 0.05
HIF3A-204ENST00000300862 LRRC2Q9BYS8 371 aa15.35■□□□□ 0.05
HIF3A-204ENST00000300862 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
HIF3A-204ENST00000300862 ZNF830Q96NB3 372 aaPredicted RBP15.35■□□□□ 0.05
HIF3A-204ENST00000300862 UQCRHLA0A096LP55 91 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 A1BGP04217 495 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 UQCRHP07919 91 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 CASP7P55210 303 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 PLCB2Q00722 1185 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 PLBD2Q8NHP8 589 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 FAM13BQ9NYF5 915 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
HIF3A-204ENST00000300862 JAK2O60674 1132 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 TIMM10P62072 90 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 TTC6Q86TZ1 520 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 ZBTB3Q9H5J0 574 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 ZNF609O15014 1411 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 KIF1AQ12756 1690 aa15.34■□□□□ 0.05
HIF3A-204ENST00000300862 ZNF594Q96JF6 807 aaPredicted RBP15.33■□□□□ 0.04
HIF3A-204ENST00000300862 FOXO4P98177 505 aa15.32■□□□□ 0.04
HIF3A-204ENST00000300862 LMTK3Q96Q04 1460 aa15.32■□□□□ 0.04
HIF3A-204ENST00000300862 GOLIM4O00461 696 aa15.32■□□□□ 0.04
HIF3A-204ENST00000300862 CYP21A2P08686 494 aa15.32■□□□□ 0.04
HIF3A-204ENST00000300862 ANKRD1Q15327 319 aa15.32■□□□□ 0.04
HIF3A-204ENST00000300862 CAMK4Q16566 473 aa15.32■□□□□ 0.04
HIF3A-204ENST00000300862 NEK1Q96PY6 1258 aa15.32■□□□□ 0.04
HIF3A-204ENST00000300862 HAUS7Q99871 368 aa15.32■□□□□ 0.04
HIF3A-204ENST00000300862 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.32■□□□□ 0.04
HIF3A-204ENST00000300862 MRC1P22897 1456 aa15.32■□□□□ 0.04
HIF3A-204ENST00000300862 ADCY5O95622 1261 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 DDX11Q96FC9 970 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 HMG20BQ9P0W2 317 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 ZNF330Q9Y3S2 320 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-204ENST00000300862 COL18A1P39060 1754 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 A0A0G2JLW4 131 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 PPFIA3O75145 1194 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 HSP90B1P14625 803 aaKnown RBP15.31■□□□□ 0.04
HIF3A-204ENST00000300862 LIG1P18858 919 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 KRT85P78386 507 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 CSPP1Q1MSJ5 1256 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 MCMDC2Q4G0Z9 681 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 LRRC24Q50LG9 513 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 USPL1Q5W0Q7 1092 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 Q6ZUG5 572 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 TOM1L2Q6ZVM7 507 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 FAM184AQ8NB25 1140 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 SPATA31A3Q5VYP0 1347 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 FOSBP53539 338 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 ATG9AQ7Z3C6 839 aa15.31■□□□□ 0.04
HIF3A-204ENST00000300862 AFDNP55196 1824 aaKnown RBP15.3■□□□□ 0.04
HIF3A-204ENST00000300862 TNS3Q68CZ2 1445 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 H7C1W4 665 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
HIF3A-204ENST00000300862 MCM5P33992 734 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 TSGA10IPQ3SY00 556 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 CADPS2Q86UW7 1296 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 MAP7D2Q96T17 732 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 FUCA2Q9BTY2 467 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 PRDM11Q9NQV5 511 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 JCADQ9P266 1359 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 PDCP20941 246 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 HSPA2P54652 639 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 STOX1Q6ZVD7 989 aa15.3■□□□□ 0.04
HIF3A-204ENST00000300862 BRF1Q92994 677 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms