RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 GOLPH3LQ9H4A5 285 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 EPB41L2O43491 1005 aaKnown RBP12.84□□□□□ -0.35
SNX20-201ENST00000300590 CDC25BP30305 580 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 SLFNL1Q499Z3 407 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 RBM43Q6ZSC3 357 aaKnown RBP12.84□□□□□ -0.35
SNX20-201ENST00000300590 DHX40Q8IX18 779 aaKnown RBP12.84□□□□□ -0.35
SNX20-201ENST00000300590 CEP57L1Q8IYX8 460 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
SNX20-201ENST00000300590 LCMT1Q9UIC8 334 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 MAP3K19Q56UN5 1328 aa12.84□□□□□ -0.35
SNX20-201ENST00000300590 OAS2P29728 719 aaKnown RBP12.83□□□□□ -0.35
SNX20-201ENST00000300590 FSIP1Q8NA03 581 aa12.83□□□□□ -0.35
SNX20-201ENST00000300590 FSD1Q9BTV5 496 aa12.83□□□□□ -0.35
SNX20-201ENST00000300590 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.35
SNX20-201ENST00000300590 CCDC9Q9Y3X0 531 aaKnown RBP12.83□□□□□ -0.35
SNX20-201ENST00000300590 TPM4P67936 248 aa12.83□□□□□ -0.36
SNX20-201ENST00000300590 SECISBP2LQ93073 1101 aaKnown RBP12.83□□□□□ -0.36
SNX20-201ENST00000300590 TM6SF1Q9BZW5 370 aa12.83□□□□□ -0.36
SNX20-201ENST00000300590 ZSWIM4Q9H7M6 989 aa12.83□□□□□ -0.36
SNX20-201ENST00000300590 ANO10Q9NW15 660 aa12.83□□□□□ -0.36
SNX20-201ENST00000300590 LMAN1P49257 510 aa12.83□□□□□ -0.36
SNX20-201ENST00000300590 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
SNX20-201ENST00000300590 RNF20Q5VTR2 975 aa12.83□□□□□ -0.36
SNX20-201ENST00000300590 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
SNX20-201ENST00000300590 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
SNX20-201ENST00000300590 CDC42BPGQ6DT37 1551 aa12.83□□□□□ -0.36
SNX20-201ENST00000300590 PI4KAP2A4QPH2 592 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 APPP05067 770 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 ARMCX5Q6P1M9 558 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 SARM1Q6SZW1 724 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 PI4KAP1Q8N8J0 262 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 SLC52A1Q9NWF4 448 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 CFAP45Q9UL16 551 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 A0A0D9SFI3 127 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 A0A1B0GVL5 298 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 LMOD1P29536 600 aaPredicted RBP12.82□□□□□ -0.36
SNX20-201ENST00000300590 ZSCAN26Q16670 478 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 SKIDA1Q1XH10 827 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 KIF2AO00139 706 aaPredicted RBP12.82□□□□□ -0.36
SNX20-201ENST00000300590 CCT2P78371 535 aaKnown RBP12.82□□□□□ -0.36
SNX20-201ENST00000300590 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 NDUFB9Q9Y6M9 179 aa12.82□□□□□ -0.36
SNX20-201ENST00000300590 CRB1P82279 1406 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
SNX20-201ENST00000300590 NRDCO43847 1150 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 USP28Q96RU2 1077 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 RASSF4Q9H2L5 321 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
SNX20-201ENST00000300590 NEXMIFQ5QGS0 1516 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 EVCP57679 992 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 GSDMDP57764 484 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 RESTQ13127 1097 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 GPATCH3Q96I76 525 aa12.81□□□□□ -0.36
SNX20-201ENST00000300590 GPS2Q13227 327 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 MAP4K1Q92918 833 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 UTP14AQ9BVJ6 771 aaKnown RBP12.8□□□□□ -0.36
SNX20-201ENST00000300590 ATP7BP35670 1465 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 SASH3O75995 380 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 CAVIN2O95810 425 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 CHGBP05060 677 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 SMC1AQ14683 1233 aaKnown RBP12.8□□□□□ -0.36
SNX20-201ENST00000300590 ANKRD1Q15327 319 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 DPCR1Q3MIW9 517 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 TXLNBQ8N3L3 684 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 SEC62Q99442 399 aaKnown RBP12.8□□□□□ -0.36
SNX20-201ENST00000300590 L2HGDHQ9H9P8 463 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
SNX20-201ENST00000300590 EDC4Q6P2E9 1401 aaKnown RBP12.8□□□□□ -0.36
SNX20-201ENST00000300590 ANKRD65E5RJM6 399 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 AMPHP49418 695 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 Q6ZUG5 572 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 ZNF589Q86UQ0 364 aaPredicted RBP12.8□□□□□ -0.36
SNX20-201ENST00000300590 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
SNX20-201ENST00000300590 MYO1CO00159 1063 aa12.79□□□□□ -0.36
SNX20-201ENST00000300590 ETF1P62495 437 aaKnown RBP12.79□□□□□ -0.36
SNX20-201ENST00000300590 POLA2Q14181 598 aa12.79□□□□□ -0.36
SNX20-201ENST00000300590 SF3A1Q15459 793 aaKnown RBP12.79□□□□□ -0.36
SNX20-201ENST00000300590 NFATC2IPQ8NCF5 419 aa12.79□□□□□ -0.36
SNX20-201ENST00000300590 NAT10Q9H0A0 1025 aaKnown RBP12.79□□□□□ -0.36
SNX20-201ENST00000300590 TSPYL1Q9H0U9 437 aa12.79□□□□□ -0.36
SNX20-201ENST00000300590 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.79□□□□□ -0.36
SNX20-201ENST00000300590 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
SNX20-201ENST00000300590 TTC21BQ7Z4L5 1316 aa12.79□□□□□ -0.36
SNX20-201ENST00000300590 SLC20A2Q08357 652 aa12.79□□□□□ -0.36
SNX20-201ENST00000300590 TOMM22Q9NS69 142 aa12.79□□□□□ -0.36
SNX20-201ENST00000300590 ANKRD26Q9UPS8 1709 aa12.79□□□□□ -0.36
SNX20-201ENST00000300590 TLR7Q9NYK1 1049 aaKnown RBP12.78□□□□□ -0.36
SNX20-201ENST00000300590 AATKQ6ZMQ8 1374 aa12.78□□□□□ -0.36
SNX20-201ENST00000300590 ZRANB2O95218 330 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNX20-201ENST00000300590 CCDC93Q567U6 631 aa12.78□□□□□ -0.36
SNX20-201ENST00000300590 HSP90AB4PQ58FF6 505 aa12.78□□□□□ -0.36
SNX20-201ENST00000300590 NUTM2GQ5VZR2 741 aa12.78□□□□□ -0.36
SNX20-201ENST00000300590 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
SNX20-201ENST00000300590 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
SNX20-201ENST00000300590 CPS1P31327 1500 aa12.78□□□□□ -0.36
SNX20-201ENST00000300590 CTAGE5O15320 804 aa12.78□□□□□ -0.36
SNX20-201ENST00000300590 OTUD7BQ6GQQ9 843 aa12.78□□□□□ -0.36
SNX20-201ENST00000300590 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms