RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 WDR33Q9C0J8 1336 aaKnown RBP24■■□□□ 1.43
HPS6-201ENST00000299238 GCKRQ14397 625 aa24■■□□□ 1.43
HPS6-201ENST00000299238 RUFY3Q7L099 469 aa24■■□□□ 1.43
HPS6-201ENST00000299238 SASH1O94885 1247 aa24■■□□□ 1.43
HPS6-201ENST00000299238 PIP4K2AP48426 406 aaPredicted RBP24■■□□□ 1.43
HPS6-201ENST00000299238 PTH1RQ03431 593 aa23.99■■□□□ 1.43
HPS6-201ENST00000299238 RUFY2Q8WXA3 655 aa23.99■■□□□ 1.43
HPS6-201ENST00000299238 RIOK3O14730 519 aaKnown RBP23.99■■□□□ 1.43
HPS6-201ENST00000299238 CABP4P57796 275 aa23.99■■□□□ 1.43
HPS6-201ENST00000299238 G3BP1Q13283 466 aaKnown RBP eCLIP23.99■■□□□ 1.43
HPS6-201ENST00000299238 CERS3Q8IU89 383 aa23.99■■□□□ 1.43
HPS6-201ENST00000299238 ANKRD7Q92527 254 aa23.98■■□□□ 1.43
HPS6-201ENST00000299238 LIMCH1Q9UPQ0 1083 aa23.98■■□□□ 1.43
HPS6-201ENST00000299238 TCHHQ07283 1943 aa23.98■■□□□ 1.43
HPS6-201ENST00000299238 ANKRD13DQ6ZTN6 518 aa23.97■■□□□ 1.43
HPS6-201ENST00000299238 KCNB2Q92953 911 aa23.97■■□□□ 1.43
HPS6-201ENST00000299238 EVI5LQ96CN4 794 aa23.97■■□□□ 1.43
HPS6-201ENST00000299238 CASTP20810 708 aaKnown RBP23.97■■□□□ 1.43
HPS6-201ENST00000299238 EAF2Q96CJ1 260 aaPredicted RBP23.97■■□□□ 1.43
HPS6-201ENST00000299238 SIL1Q9H173 461 aa23.97■■□□□ 1.43
HPS6-201ENST00000299238 LARGE1O95461 756 aa23.96■■□□□ 1.43
HPS6-201ENST00000299238 EPHA10Q5JZY3 1008 aa23.96■■□□□ 1.43
HPS6-201ENST00000299238 USP48Q86UV5 1035 aa23.96■■□□□ 1.43
HPS6-201ENST00000299238 ADCK5Q3MIX3 580 aa23.96■■□□□ 1.43
HPS6-201ENST00000299238 SLFN14P0C7P3 912 aa23.95■■□□□ 1.42
HPS6-201ENST00000299238 KLHDC4Q8TBB5 520 aa23.95■■□□□ 1.42
HPS6-201ENST00000299238 PRDM11Q9NQV5 511 aa23.95■■□□□ 1.42
HPS6-201ENST00000299238 ABCA3Q99758 1704 aa23.95■■□□□ 1.42
HPS6-201ENST00000299238 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
HPS6-201ENST00000299238 PRPF40BQ6NWY9 871 aaKnown RBP23.95■■□□□ 1.42
HPS6-201ENST00000299238 USP25Q9UHP3 1055 aa23.95■■□□□ 1.42
HPS6-201ENST00000299238 UBR2Q8IWV8 1755 aa23.94■■□□□ 1.42
HPS6-201ENST00000299238 CCDC8Q9H0W5 538 aaPredicted RBP23.94■■□□□ 1.42
HPS6-201ENST00000299238 TLR7Q9NYK1 1049 aaKnown RBP23.94■■□□□ 1.42
HPS6-201ENST00000299238 COL5A2P05997 1499 aaPredicted RBP23.93■■□□□ 1.42
HPS6-201ENST00000299238 NECTIN1Q15223 517 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 TM6SF1Q9BZW5 370 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 TSPY26PQ9H489 355 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 OGFRQ9NZT2 677 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 CNPY2Q9Y2B0 182 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 CCDC171Q6TFL3 1326 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 STRCQ7RTU9 1775 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 TMEM87AQ8NBN3 555 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 ZSWIM6Q9HCJ5 1215 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 SPTLC3Q9NUV7 552 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 PCDH11XQ9BZA7 1347 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 PCDH11YQ9BZA8 1340 aa23.93■■□□□ 1.42
HPS6-201ENST00000299238 VPS53Q5VIR6 699 aa23.92■■□□□ 1.42
HPS6-201ENST00000299238 ZSCAN22P10073 491 aaPredicted RBP23.92■■□□□ 1.42
HPS6-201ENST00000299238 COL9A3Q14050 684 aaPredicted RBP23.92■■□□□ 1.42
HPS6-201ENST00000299238 TOM1L2Q6ZVM7 507 aa23.92■■□□□ 1.42
HPS6-201ENST00000299238 JAKMIP1Q96N16 626 aaKnown RBP23.92■■□□□ 1.42
HPS6-201ENST00000299238 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.92■■□□□ 1.42
HPS6-201ENST00000299238 SYT1P21579 422 aa23.91■■□□□ 1.42
HPS6-201ENST00000299238 FAM227BQ96M60 508 aa23.91■■□□□ 1.42
HPS6-201ENST00000299238 FEZ1Q99689 392 aa23.91■■□□□ 1.42
HPS6-201ENST00000299238 SNRKQ9NRH2 765 aa23.91■■□□□ 1.42
HPS6-201ENST00000299238 CCDC83Q8IWF9 413 aa23.91■■□□□ 1.42
HPS6-201ENST00000299238 ZFP91Q96JP5 570 aaPredicted RBP23.91■■□□□ 1.42
HPS6-201ENST00000299238 PAPPAQ13219 1627 aa23.91■■□□□ 1.42
HPS6-201ENST00000299238 SHANK3Q9BYB0 1731 aa23.91■■□□□ 1.42
HPS6-201ENST00000299238 SOS2Q07890 1332 aaPredicted RBP23.9■■□□□ 1.42
HPS6-201ENST00000299238 STX6O43752 255 aa23.9■■□□□ 1.42
HPS6-201ENST00000299238 NMIQ13287 307 aaPredicted RBP23.9■■□□□ 1.42
HPS6-201ENST00000299238 UBE3BQ7Z3V4 1068 aa23.9■■□□□ 1.42
HPS6-201ENST00000299238 ZCRB1Q8TBF4 217 aaKnown RBP23.9■■□□□ 1.42
HPS6-201ENST00000299238 PDRG1Q9NUG6 133 aa23.9■■□□□ 1.42
HPS6-201ENST00000299238 CAPN2P17655 700 aa23.89■■□□□ 1.42
HPS6-201ENST00000299238 NUP188Q5SRE5 1749 aa23.89■■□□□ 1.42
HPS6-201ENST00000299238 COL15A1P39059 1388 aa23.89■■□□□ 1.41
HPS6-201ENST00000299238 ATP5J2-PTCD1G3V325 749 aa23.89■■□□□ 1.41
HPS6-201ENST00000299238 PTCD1O75127 700 aaKnown RBP23.89■■□□□ 1.41
HPS6-201ENST00000299238 MAP4K1Q92918 833 aa23.89■■□□□ 1.41
HPS6-201ENST00000299238 SMC3Q9UQE7 1217 aa23.89■■□□□ 1.41
HPS6-201ENST00000299238 RBM8AQ9Y5S9 174 aaKnown RBP23.89■■□□□ 1.41
HPS6-201ENST00000299238 HIP1O00291 1037 aa23.88■■□□□ 1.41
HPS6-201ENST00000299238 PLBD2Q8NHP8 589 aa23.88■■□□□ 1.41
HPS6-201ENST00000299238 SYAP1Q96A49 352 aaPredicted RBP23.88■■□□□ 1.41
HPS6-201ENST00000299238 COPRSQ9NQ92 184 aa23.88■■□□□ 1.41
HPS6-201ENST00000299238 CYP46A1Q9Y6A2 500 aa23.88■■□□□ 1.41
HPS6-201ENST00000299238 KCPQ6ZWJ8 1503 aa23.88■■□□□ 1.41
HPS6-201ENST00000299238 FIBPO43427 364 aa23.87■■□□□ 1.41
HPS6-201ENST00000299238 RFX5P48382 616 aaPredicted RBP23.87■■□□□ 1.41
HPS6-201ENST00000299238 CREB3L3Q68CJ9 461 aa23.87■■□□□ 1.41
HPS6-201ENST00000299238 GABPB1Q06547 395 aaPredicted RBP23.87■■□□□ 1.41
HPS6-201ENST00000299238 NCBP1Q09161 790 aaKnown RBP23.87■■□□□ 1.41
HPS6-201ENST00000299238 ST3GAL1Q11201 340 aa23.87■■□□□ 1.41
HPS6-201ENST00000299238 RABL6Q3YEC7 729 aaPredicted RBP23.87■■□□□ 1.41
HPS6-201ENST00000299238 BOLA2Q9H3K6 86 aa23.87■■□□□ 1.41
HPS6-201ENST00000299238 DNAJC5Q9H3Z4 198 aa23.87■■□□□ 1.41
HPS6-201ENST00000299238 CTNNA3Q9UI47 895 aa23.87■■□□□ 1.41
HPS6-201ENST00000299238 NBPF26B4DH59 902 aa23.86■■□□□ 1.41
HPS6-201ENST00000299238 CTIFO43310 598 aaKnown RBP23.86■■□□□ 1.41
HPS6-201ENST00000299238 ADCY5O95622 1261 aa23.86■■□□□ 1.41
HPS6-201ENST00000299238 NBPF14Q5TI25 921 aa23.86■■□□□ 1.41
HPS6-201ENST00000299238 NBPF10Q6P3W6 841 aaKnown RBP23.86■■□□□ 1.41
HPS6-201ENST00000299238 NBPF15Q8N660 670 aa23.86■■□□□ 1.41
HPS6-201ENST00000299238 TRERF1Q96PN7 1200 aa23.86■■□□□ 1.41
HPS6-201ENST00000299238 A0A087WZG4 1122 aa23.86■■□□□ 1.41
HPS6-201ENST00000299238 A0A0D9SFI3 127 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms