RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 CTCFLQ8NI51 663 aaPredicted RBP8.5□□□□□ -1.05
TSC1-201ENST00000298552 RANBP1P43487 201 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 TTC39AQ5SRH9 613 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 CCDC121Q6ZUS5 278 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 BTN2A1Q7KYR7 527 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 NSMCE1Q8WV22 266 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 CTAGE9A4FU28 777 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 TCHHQ07283 1943 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 NEDD9Q14511 834 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 FAM186BQ8IYM0 893 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 ANKRD35Q8N283 1001 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 SAMD15Q9P1V8 674 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 PLEKHH1Q9ULM0 1364 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 RRP1P56182 461 aaKnown RBP8.5□□□□□ -1.05
TSC1-201ENST00000298552 GNAI1P63096 354 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 ZNF449Q6P9G9 518 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 NECAB1Q8N987 351 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 ZNF652Q9Y2D9 606 aa8.5□□□□□ -1.05
TSC1-201ENST00000298552 FOXD4L6Q3SYB3 417 aaPredicted RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 CCDC62Q6P9F0 684 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 FOXD4L3Q6VB84 417 aaPredicted RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 NUP133Q8WUM0 1156 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 ZRANB2O95218 330 aaKnown RBP eCLIP8.49□□□□□ -1.053e-9■■■□□ 16.4
TSC1-201ENST00000298552 SLMAPQ14BN4 828 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 CCDC25Q86WR0 208 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 CALML4Q96GE6 196 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.49□□□□□ -1.05
TSC1-201ENST00000298552 ARHGAP35Q9NRY4 1499 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 KRT8P05787 483 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 GRIN1Q05586 938 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 TBC1D10BQ4KMP7 808 aaPredicted RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 GFM2Q969S9 779 aaKnown RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 MTRF1LQ9UGC7 380 aaKnown RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 FAM13AO94988 1023 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 UBTFL1P0CB47 393 aaPredicted RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 PTPN14Q15678 1187 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 INF2Q27J81 1249 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 MAATS1Q7Z4T9 603 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 IQCA1Q86XH1 822 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 IPO4Q8TEX9 1081 aaKnown RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 MAK16Q9BXY0 300 aaKnown RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 ORC3Q9UBD5 711 aaPredicted RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 KNL1Q8NG31 2342 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 PHBP35232 272 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 TDO2P48775 406 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 BZW1Q7L1Q6 419 aaKnown RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 PDS5BQ9NTI5 1447 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 ZNF638Q14966 1978 aaKnown RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 CYP46A1Q9Y6A2 500 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 CITO14578 2027 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 NUCB1Q02818 461 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
TSC1-201ENST00000298552 STK26Q9P289 416 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 SERPINA10Q9UK55 444 aa8.49□□□□□ -1.05
TSC1-201ENST00000298552 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
TSC1-201ENST00000298552 CNGA4Q8IV77 575 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 TMC2Q8TDI7 906 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 WHAMMP3Q1A5X7 153 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 B4GALNT4Q76KP1 1039 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 TNPO1Q92973 898 aaKnown RBP8.48□□□□□ -1.05
TSC1-201ENST00000298552 NRBF2Q96F24 287 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 LGSNQ5TDP6 509 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 RUFY4Q6ZNE9 571 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 NUP62CLQ9H1M0 184 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 U3KPZ7 1027 aaPredicted RBP8.48□□□□□ -1.05
TSC1-201ENST00000298552 ICE1Q9Y2F5 2266 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 ATF3P18847 181 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 SYCP3Q8IZU3 236 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 EDEM3Q9BZQ6 932 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 RTEL1Q9NZ71 1219 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 FKBP5Q13451 457 aaPredicted RBP8.48□□□□□ -1.05
TSC1-201ENST00000298552 MPHOSPH8Q99549 860 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 CNNM1Q9NRU3 951 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 ZSCAN32Q9NX65 697 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 PPP6R1Q9UPN7 881 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 HYOU1Q9Y4L1 999 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 CALM1P0DP23 149 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 CALM2P0DP24 149 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 CALM3P0DP25 149 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 CHMP6Q96FZ7 201 aa8.48□□□□□ -1.05
TSC1-201ENST00000298552 APOBRQ0VD83 1088 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 HOXA7P31268 230 aaPredicted RBP8.47□□□□□ -1.05
TSC1-201ENST00000298552 PSME1Q06323 249 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 SAFB2Q14151 953 aaKnown RBP eCLIP8.47□□□□□ -1.05
TSC1-201ENST00000298552 RAB11FIP4Q86YS3 637 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 GAS2L2Q8NHY3 880 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 JRKLQ9Y4A0 524 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 FMNL1O95466 1100 aaPredicted RBP8.47□□□□□ -1.05
TSC1-201ENST00000298552 RMND1Q9NWS8 449 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 FLOT2Q14254 428 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 CCDC152Q4G0S7 254 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 USP6NLQ92738 828 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 HYPKQ9NX55 129 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 MYO15BQ96JP2 1530 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 HSPA5P11021 654 aaKnown RBP8.47□□□□□ -1.05
TSC1-201ENST00000298552 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.47□□□□□ -1.05
TSC1-201ENST00000298552 BUB1BO60566 1050 aaPredicted RBP8.47□□□□□ -1.05
TSC1-201ENST00000298552 ZNF165P49910 485 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 AMOTQ4VCS5 1084 aa8.47□□□□□ -1.05
TSC1-201ENST00000298552 TMTC1Q8IUR5 882 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms