RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 IL15P40933 162 aaPredicted RBP31.18■■■□□ 2.58
SDCCAG3-201ENST00000298537 EVI5LQ96CN4 794 aa31.18■■■□□ 2.58
SDCCAG3-201ENST00000298537 FOXD4L1Q9NU39 408 aa31.17■■■□□ 2.58
SDCCAG3-201ENST00000298537 CHGBP05060 677 aa31.16■■■□□ 2.58
SDCCAG3-201ENST00000298537 FAM227BQ96M60 508 aa31.16■■■□□ 2.58
SDCCAG3-201ENST00000298537 COL5A3P25940 1745 aaPredicted RBP31.16■■■□□ 2.58
SDCCAG3-201ENST00000298537 CTSWP56202 376 aa31.15■■■□□ 2.58
SDCCAG3-201ENST00000298537 RABEP1Q15276 862 aa31.15■■■□□ 2.58
SDCCAG3-201ENST00000298537 HCLS1P14317 486 aaPredicted RBP31.15■■■□□ 2.58
SDCCAG3-201ENST00000298537 DIAPH3Q9NSV4 1193 aa31.15■■■□□ 2.58
SDCCAG3-201ENST00000298537 CICQ96RK0 1608 aaPredicted RBP31.14■■■□□ 2.58
SDCCAG3-201ENST00000298537 ITGA6P23229 1130 aa31.14■■■□□ 2.58
SDCCAG3-201ENST00000298537 IFIT5Q13325 482 aaKnown RBP31.14■■■□□ 2.58
SDCCAG3-201ENST00000298537 SEPT12Q8IYM1 358 aa31.14■■■□□ 2.58
SDCCAG3-201ENST00000298537 LSG1Q9H089 658 aaKnown RBP31.14■■■□□ 2.58
SDCCAG3-201ENST00000298537 BTAF1O14981 1849 aa31.13■■■□□ 2.57
SDCCAG3-201ENST00000298537 ATP5JP18859 108 aa31.13■■■□□ 2.57
SDCCAG3-201ENST00000298537 NFKBIBQ15653 356 aa31.13■■■□□ 2.57
SDCCAG3-201ENST00000298537 ATRNO75882 1429 aa31.12■■■□□ 2.57
SDCCAG3-201ENST00000298537 CIAO1O76071 339 aa31.12■■■□□ 2.57
SDCCAG3-201ENST00000298537 DNAJC2Q99543 621 aaKnown RBP31.12■■■□□ 2.57
SDCCAG3-201ENST00000298537 K7ELQ4 463 aaPredicted RBP31.12■■■□□ 2.57
SDCCAG3-201ENST00000298537 TAF7LQ5H9L4 462 aa31.12■■■□□ 2.57
SDCCAG3-201ENST00000298537 AMIGO3Q86WK7 504 aa31.12■■■□□ 2.57
SDCCAG3-201ENST00000298537 FSD1Q9BTV5 496 aa31.12■■■□□ 2.57
SDCCAG3-201ENST00000298537 NIP7Q9Y221 180 aaKnown RBP eCLIP31.12■■■□□ 2.57
SDCCAG3-201ENST00000298537 A0A1B0GUL7 405 aa31.11■■■□□ 2.57
SDCCAG3-201ENST00000298537 NMIQ13287 307 aaPredicted RBP31.11■■■□□ 2.57
SDCCAG3-201ENST00000298537 TRPC5Q9UL62 973 aaPredicted RBP31.11■■■□□ 2.57
SDCCAG3-201ENST00000298537 PTH1RQ03431 593 aa31.1■■■□□ 2.57
SDCCAG3-201ENST00000298537 ZNF609O15014 1411 aa31.1■■■□□ 2.57
SDCCAG3-201ENST00000298537 A0A0D9SFI3 127 aa31.09■■■□□ 2.57
SDCCAG3-201ENST00000298537 PDE8AO60658 829 aa31.09■■■□□ 2.57
SDCCAG3-201ENST00000298537 ADORA1P30542 326 aa31.09■■■□□ 2.57
SDCCAG3-201ENST00000298537 QTRT2Q9H974 415 aaKnown RBP31.09■■■□□ 2.57
SDCCAG3-201ENST00000298537 ONECUT3O60422 494 aaPredicted RBP31.08■■■□□ 2.57
SDCCAG3-201ENST00000298537 CEP126Q9P2H0 1117 aa31.08■■■□□ 2.57
SDCCAG3-201ENST00000298537 RAD50Q92878 1312 aa31.08■■■□□ 2.57
SDCCAG3-201ENST00000298537 FRAT2O75474 233 aaPredicted RBP31.08■■■□□ 2.57
SDCCAG3-201ENST00000298537 DDX46Q7L014 1031 aaKnown RBP31.08■■■□□ 2.57
SDCCAG3-201ENST00000298537 HSPA4P34932 840 aa31.07■■■□□ 2.56
SDCCAG3-201ENST00000298537 UTP14AQ9BVJ6 771 aaKnown RBP31.07■■■□□ 2.56
SDCCAG3-201ENST00000298537 GPR108Q9NPR9 543 aa31.07■■■□□ 2.56
SDCCAG3-201ENST00000298537 NHSQ6T4R5 1651 aa31.07■■■□□ 2.56
SDCCAG3-201ENST00000298537 SLFNL1Q499Z3 407 aa31.06■■■□□ 2.56
SDCCAG3-201ENST00000298537 LDHAL6AQ6ZMR3 332 aa31.06■■■□□ 2.56
SDCCAG3-201ENST00000298537 CCNL1Q9UK58 526 aaPredicted RBP31.06■■■□□ 2.56
SDCCAG3-201ENST00000298537 RIPOR2Q9Y4F9 1068 aa31.06■■■□□ 2.56
SDCCAG3-201ENST00000298537 SH3TC1Q8TE82 1336 aa31.06■■■□□ 2.56
SDCCAG3-201ENST00000298537 RIC1Q4ADV7 1423 aa31.06■■■□□ 2.56
SDCCAG3-201ENST00000298537 NTSR2O95665 410 aa31.06■■■□□ 2.56
SDCCAG3-201ENST00000298537 HAUS7Q99871 368 aa31.06■■■□□ 2.56
SDCCAG3-201ENST00000298537 RASEFQ8IZ41 740 aa31.05■■■□□ 2.56
SDCCAG3-201ENST00000298537 ANKRD18BA2A2Z9 1011 aa31.04■■■□□ 2.56
SDCCAG3-201ENST00000298537 MYH3P11055 1940 aa31.04■■■□□ 2.56
SDCCAG3-201ENST00000298537 NEK4P51957 841 aa31.04■■■□□ 2.56
SDCCAG3-201ENST00000298537 UPF3BQ9BZI7 483 aaKnown RBP31.04■■■□□ 2.56
SDCCAG3-201ENST00000298537 SRP68Q9UHB9 627 aaKnown RBP31.04■■■□□ 2.56
SDCCAG3-201ENST00000298537 MCCP23508 829 aa31.04■■■□□ 2.56
SDCCAG3-201ENST00000298537 SEC31BQ9NQW1 1179 aa31.04■■■□□ 2.56
SDCCAG3-201ENST00000298537 CNTNAP4Q9C0A0 1308 aa31.03■■■□□ 2.56
SDCCAG3-201ENST00000298537 DDIT3P35638 169 aa31.03■■■□□ 2.56
SDCCAG3-201ENST00000298537 BICDL1Q6ZP65 573 aa31.03■■■□□ 2.56
SDCCAG3-201ENST00000298537 ZNF589Q86UQ0 364 aaPredicted RBP31.03■■■□□ 2.56
SDCCAG3-201ENST00000298537 BCL2L12Q9HB09 334 aa31.03■■■□□ 2.56
SDCCAG3-201ENST00000298537 KIAA1211Q6ZU35 1233 aa31.02■■■□□ 2.56
SDCCAG3-201ENST00000298537 RUFY2Q8WXA3 655 aa31.02■■■□□ 2.56
SDCCAG3-201ENST00000298537 ZNF831Q5JPB2 1677 aa31.02■■■□□ 2.56
SDCCAG3-201ENST00000298537 GNPATO15228 680 aa31.02■■■□□ 2.56
SDCCAG3-201ENST00000298537 GOLIM4O00461 696 aa31.01■■■□□ 2.55
SDCCAG3-201ENST00000298537 METTL24Q5JXM2 366 aa31.01■■■□□ 2.55
SDCCAG3-201ENST00000298537 XAGE2Q96GT9 111 aa31.01■■■□□ 2.55
SDCCAG3-201ENST00000298537 SEC62Q99442 399 aaKnown RBP31.01■■■□□ 2.55
SDCCAG3-201ENST00000298537 CNNM1Q9NRU3 951 aa31.01■■■□□ 2.55
SDCCAG3-201ENST00000298537 SNX14Q9Y5W7 946 aa31.01■■■□□ 2.55
SDCCAG3-201ENST00000298537 PARP10Q53GL7 1025 aa31■■■□□ 2.55
SDCCAG3-201ENST00000298537 USPL1Q5W0Q7 1092 aa31■■■□□ 2.55
SDCCAG3-201ENST00000298537 SBF2Q86WG5 1849 aa31■■■□□ 2.55
SDCCAG3-201ENST00000298537 NOL8Q76FK4 1167 aaKnown RBP30.99■■■□□ 2.55
SDCCAG3-201ENST00000298537 HELBQ8NG08 1087 aaPredicted RBP30.99■■■□□ 2.55
SDCCAG3-201ENST00000298537 HSP90AA1P07900 732 aaKnown RBP30.99■■■□□ 2.55
SDCCAG3-201ENST00000298537 SNRKQ9NRH2 765 aa30.99■■■□□ 2.55
SDCCAG3-201ENST00000298537 FBXO3Q9UK99 471 aa30.99■■■□□ 2.55
SDCCAG3-201ENST00000298537 BCORQ6W2J9 1755 aa30.99■■■□□ 2.55
SDCCAG3-201ENST00000298537 ST18O60284 1047 aa30.98■■■□□ 2.55
SDCCAG3-201ENST00000298537 ANAPC15P60006 121 aa30.98■■■□□ 2.55
SDCCAG3-201ENST00000298537 SCARF1Q14162 830 aa30.98■■■□□ 2.55
SDCCAG3-201ENST00000298537 TBC1D9BQ66K14 1250 aa30.98■■■□□ 2.55
SDCCAG3-201ENST00000298537 C3orf67Q6ZVT6 689 aa30.98■■■□□ 2.55
SDCCAG3-201ENST00000298537 SNAP23O00161 211 aa30.98■■■□□ 2.55
SDCCAG3-201ENST00000298537 CCDC129Q6ZRS4 1044 aa30.98■■■□□ 2.55
SDCCAG3-201ENST00000298537 VGLL2Q8N8G2 317 aa30.98■■■□□ 2.55
SDCCAG3-201ENST00000298537 CCDC171Q6TFL3 1326 aa30.98■■■□□ 2.55
SDCCAG3-201ENST00000298537 DDX60Q8IY21 1712 aaKnown RBP30.97■■■□□ 2.55
SDCCAG3-201ENST00000298537 COL4A1P02462 1669 aa30.97■■■□□ 2.55
SDCCAG3-201ENST00000298537 IFIT1P09914 478 aaKnown RBP30.97■■■□□ 2.55
SDCCAG3-201ENST00000298537 PRPF40BQ6NWY9 871 aaKnown RBP30.97■■■□□ 2.55
SDCCAG3-201ENST00000298537 PI16Q6UXB8 463 aa30.97■■■□□ 2.55
SDCCAG3-201ENST00000298537 LRRC4BQ9NT99 713 aa30.97■■■□□ 2.55
SDCCAG3-201ENST00000298537 PAG1Q9NWQ8 432 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms