RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 RASSF4Q9H2L5 321 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 C14orf93Q9H972 538 aaKnown RBP12.63□□□□□ -0.39
PBRM1-201ENST00000296302 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 RTL1A6NKG5 1358 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 TRIM21P19474 475 aaKnown RBP12.63□□□□□ -0.39
PBRM1-201ENST00000296302 WAPLQ7Z5K2 1190 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 CALML4Q96GE6 196 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 MAP3K2Q9Y2U5 619 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 MRC2Q9UBG0 1479 aa12.63□□□□□ -0.39
PBRM1-201ENST00000296302 RANBP6O60518 1105 aaKnown RBP12.62□□□□□ -0.39
PBRM1-201ENST00000296302 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 PLEKHM2Q8IWE5 1019 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 SYT10Q6XYQ8 523 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 MICALL1Q8N3F8 863 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 KLF18A0A0U1RQI7 1052 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 PI4KAP2A4QPH2 592 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 PI4KAP1Q8N8J0 262 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 TRIM47Q96LD4 638 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 KIF14Q15058 1648 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 AK2P54819 239 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 MKNK2Q9HBH9 465 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
PBRM1-201ENST00000296302 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 WASLO00401 505 aaPredicted RBP12.61□□□□□ -0.39
PBRM1-201ENST00000296302 KRT83P78385 493 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 ATL3Q6DD88 541 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 SLC26A6Q9BXS9 759 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 NSRP1Q9H0G5 558 aaKnown RBP12.61□□□□□ -0.39
PBRM1-201ENST00000296302 VPS18Q9P253 973 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 TTC41PQ6P2S7 1318 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 SPTLC2O15270 562 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 TACC1O75410 805 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 SLC5A1P13866 664 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 LMOD1P29536 600 aaPredicted RBP12.61□□□□□ -0.39
PBRM1-201ENST00000296302 NOP2P46087 812 aaKnown RBP12.61□□□□□ -0.39
PBRM1-201ENST00000296302 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
PBRM1-201ENST00000296302 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
PBRM1-201ENST00000296302 IRX3P78415 501 aaPredicted RBP12.61□□□□□ -0.39
PBRM1-201ENST00000296302 CAVIN4Q5BKX8 364 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 ZFYP08048 801 aaPredicted RBP12.61□□□□□ -0.39
PBRM1-201ENST00000296302 KIF5BP33176 963 aa12.61□□□□□ -0.39
PBRM1-201ENST00000296302 RRAGBQ5VZM2 374 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 HDXQ7Z353 690 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 HOOK3Q86VS8 718 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 CCDC155Q8N6L0 562 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 ATRIPQ8WXE1 791 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 ALG1Q9BT22 464 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 KRT86O43790 486 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 IGSF3O75054 1194 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 CETN1Q12798 172 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 Q6ZUG5 572 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 TNNQ9UQP3 1299 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 CEP85Q6P2H3 762 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 ARFGAP2Q8N6H7 521 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 OTUD6BQ8N6M0 293 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 IFNKQ9P0W0 207 aa12.6□□□□□ -0.39
PBRM1-201ENST00000296302 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
PBRM1-201ENST00000296302 HAND2P61296 217 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 UBE4AQ14139 1066 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 UBA5Q9GZZ9 404 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 NOS1P29475 1434 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 IDEP14735 1019 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 DDX12PQ92771 950 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 ZBTB43O43298 467 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 CHMLP26374 656 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 PRPF4BQ13523 1007 aaKnown RBP12.59□□□□□ -0.39
PBRM1-201ENST00000296302 C6orf163Q5TEZ5 329 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 CCDC121Q6ZUS5 278 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 CTNNBL1Q8WYA6 563 aaPredicted RBP12.59□□□□□ -0.39
PBRM1-201ENST00000296302 PRAG1Q86YV5 1406 aa12.59□□□□□ -0.39
PBRM1-201ENST00000296302 ANKRD18BA2A2Z9 1011 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 MYO1BO43795 1136 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 ALDH1L1O75891 902 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 KIAA0753Q2KHM9 967 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
PBRM1-201ENST00000296302 CCDC144CPQ8IYA2 1237 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 C10orf67Q8IYJ2 551 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 TMTC2Q8N394 836 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 EXOC1Q9NV70 894 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 PTPRKQ15262 1439 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 A0A1B0GUL7 405 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 KIF5AQ12840 1032 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 MPRIPQ6WCQ1 1025 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 ZNF444Q8N0Y2 327 aaPredicted RBP12.58□□□□□ -0.4
PBRM1-201ENST00000296302 C8orf58Q8NAV2 365 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 SELENOOQ9BVL4 669 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 RAD50Q92878 1312 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 EVCP57679 992 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 TUBB2AQ13885 445 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 TNIP1Q15025 636 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 MSL1Q68DK7 614 aa12.58□□□□□ -0.4
PBRM1-201ENST00000296302 BRAPQ7Z569 592 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms