RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 GRM1Q13255 1194 aa13.83□□□□□ -0.2
RFC4-201ENST00000296273 CIAPIN1Q6FI81 312 aa13.83□□□□□ -0.2
RFC4-201ENST00000296273 DPP8Q6V1X1 898 aaPredicted RBP13.83□□□□□ -0.2
RFC4-201ENST00000296273 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
RFC4-201ENST00000296273 SAPCD2Q86UD0 394 aa13.83□□□□□ -0.2
RFC4-201ENST00000296273 MPNDQ8N594 471 aa13.83□□□□□ -0.2
RFC4-201ENST00000296273 PGAP2Q9UHJ9 254 aa13.83□□□□□ -0.2
RFC4-201ENST00000296273 CELF2O95319 508 aaKnown RBP13.82□□□□□ -0.2
RFC4-201ENST00000296273 EIF2S2P20042 333 aaKnown RBP13.82□□□□□ -0.2
RFC4-201ENST00000296273 KIAA2012Q0VF49 1180 aa13.82□□□□□ -0.2
RFC4-201ENST00000296273 TNIP1Q15025 636 aa13.82□□□□□ -0.2
RFC4-201ENST00000296273 PDIA6Q15084 440 aa13.82□□□□□ -0.2
RFC4-201ENST00000296273 DDX46Q7L014 1031 aaKnown RBP13.82□□□□□ -0.2
RFC4-201ENST00000296273 TMC4Q7Z404 712 aa13.82□□□□□ -0.2
RFC4-201ENST00000296273 BCL2L13Q9BXK5 485 aa13.82□□□□□ -0.2
RFC4-201ENST00000296273 GMPSP49915 693 aaPredicted RBP13.81□□□□□ -0.2
RFC4-201ENST00000296273 BRPF1P55201 1214 aaPredicted RBP13.8□□□□□ -0.2
RFC4-201ENST00000296273 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
RFC4-201ENST00000296273 GRAPQ13588 217 aa13.8□□□□□ -0.2
RFC4-201ENST00000296273 FAM161AQ3B820 660 aa13.8□□□□□ -0.2
RFC4-201ENST00000296273 CDC37L1Q7L3B6 337 aa13.8□□□□□ -0.2
RFC4-201ENST00000296273 SLC51AQ86UW1 340 aa13.8□□□□□ -0.2
RFC4-201ENST00000296273 NLRP10Q86W26 655 aa13.8□□□□□ -0.2
RFC4-201ENST00000296273 GRAPLQ8TC17 118 aaPredicted RBP13.8□□□□□ -0.2
RFC4-201ENST00000296273 ANKRD36CQ5JPF3 1778 aa13.79□□□□□ -0.2
RFC4-201ENST00000296273 RIPK4P57078 832 aa13.79□□□□□ -0.2
RFC4-201ENST00000296273 TCIRG1Q13488 830 aa13.79□□□□□ -0.2
RFC4-201ENST00000296273 COPS6Q7L5N1 327 aa13.79□□□□□ -0.2
RFC4-201ENST00000296273 GLIS2Q9BZE0 524 aaPredicted RBP13.79□□□□□ -0.2
RFC4-201ENST00000296273 TRMT112Q9UI30 125 aaKnown RBP13.79□□□□□ -0.2
RFC4-201ENST00000296273 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
RFC4-201ENST00000296273 CCDC85CA6NKD9 419 aa13.78□□□□□ -0.2
RFC4-201ENST00000296273 H7C1D1 291 aa13.78□□□□□ -0.2
RFC4-201ENST00000296273 AOC2O75106 756 aa13.78□□□□□ -0.2
RFC4-201ENST00000296273 RAD17O75943 681 aa13.78□□□□□ -0.2
RFC4-201ENST00000296273 HCLS1P14317 486 aaPredicted RBP13.78□□□□□ -0.2
RFC4-201ENST00000296273 RGS19P49795 217 aa13.78□□□□□ -0.2
RFC4-201ENST00000296273 MLLT1Q03111 559 aaPredicted RBP13.78□□□□□ -0.2
RFC4-201ENST00000296273 PROSER3Q2NL68 480 aa13.78□□□□□ -0.2
RFC4-201ENST00000296273 CNOT7Q9UIV1 285 aaKnown RBP13.78□□□□□ -0.2
RFC4-201ENST00000296273 ANXA1P04083 346 aa13.77□□□□□ -0.21
RFC4-201ENST00000296273 AIMP1Q12904 312 aaKnown RBP13.77□□□□□ -0.21
RFC4-201ENST00000296273 NOGQ13253 232 aa13.77□□□□□ -0.21
RFC4-201ENST00000296273 XAGE3Q8WTP9 111 aa13.77□□□□□ -0.21
RFC4-201ENST00000296273 DPF2Q92785 391 aa13.77□□□□□ -0.21
RFC4-201ENST00000296273 LAMB2P55268 1798 aa13.77□□□□□ -0.21
RFC4-201ENST00000296273 HIRAP54198 1017 aaPredicted RBP13.76□□□□□ -0.21
RFC4-201ENST00000296273 ZNF408Q9H9D4 720 aa13.76□□□□□ -0.21
RFC4-201ENST00000296273 TSKSQ9UJT2 592 aa13.76□□□□□ -0.21
RFC4-201ENST00000296273 YDJCA8MPS7 323 aa13.75□□□□□ -0.21
RFC4-201ENST00000296273 SLC34A2O95436 690 aa13.75□□□□□ -0.21
RFC4-201ENST00000296273 TMPOP42166 694 aaKnown RBP13.75□□□□□ -0.21
RFC4-201ENST00000296273 WASHC4Q2M389 1173 aa13.75□□□□□ -0.21
RFC4-201ENST00000296273 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
RFC4-201ENST00000296273 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
RFC4-201ENST00000296273 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
RFC4-201ENST00000296273 RPS12P25398 132 aaKnown RBP13.74□□□□□ -0.21
RFC4-201ENST00000296273 LRRC37AA6NMS7 1700 aa13.74□□□□□ -0.21
RFC4-201ENST00000296273 DUOX1Q9NRD9 1551 aa13.74□□□□□ -0.21
RFC4-201ENST00000296273 HOXB7P09629 217 aa13.73□□□□□ -0.21
RFC4-201ENST00000296273 HUNKP57058 714 aa13.73□□□□□ -0.21
RFC4-201ENST00000296273 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
RFC4-201ENST00000296273 PLBD2Q8NHP8 589 aa13.73□□□□□ -0.21
RFC4-201ENST00000296273 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
RFC4-201ENST00000296273 EYA3Q99504 573 aa13.73□□□□□ -0.21
RFC4-201ENST00000296273 MCOLN1Q9GZU1 580 aa13.73□□□□□ -0.21
RFC4-201ENST00000296273 NSFL1CQ9UNZ2 370 aaKnown RBP13.73□□□□□ -0.21
RFC4-201ENST00000296273 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
RFC4-201ENST00000296273 PSMD14O00487 310 aa13.72□□□□□ -0.21
RFC4-201ENST00000296273 RALBP1Q15311 655 aa13.72□□□□□ -0.21
RFC4-201ENST00000296273 ANKRD13DQ6ZTN6 518 aa13.72□□□□□ -0.21
RFC4-201ENST00000296273 USP48Q86UV5 1035 aa13.72□□□□□ -0.21
RFC4-201ENST00000296273 CHL1O00533 1208 aa13.71□□□□□ -0.21
RFC4-201ENST00000296273 DGKZQ13574 1117 aa13.71□□□□□ -0.21
RFC4-201ENST00000296273 RGMBQ6NW40 437 aa13.71□□□□□ -0.21
RFC4-201ENST00000296273 KRT26Q7Z3Y9 468 aa13.71□□□□□ -0.21
RFC4-201ENST00000296273 C2orf69Q8N8R5 385 aa13.71□□□□□ -0.21
RFC4-201ENST00000296273 CCDC102AQ96A19 550 aa13.71□□□□□ -0.21
RFC4-201ENST00000296273 DCPSQ96C86 337 aaKnown RBP13.71□□□□□ -0.21
RFC4-201ENST00000296273 ISCA1Q9BUE6 129 aa13.71□□□□□ -0.21
RFC4-201ENST00000296273 CHPF2Q9P2E5 772 aa13.71□□□□□ -0.21
RFC4-201ENST00000296273 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.21
RFC4-201ENST00000296273 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
RFC4-201ENST00000296273 SHTN1A0MZ66 631 aa13.71□□□□□ -0.22
RFC4-201ENST00000296273 C6orf229H3BNL8 230 aa13.71□□□□□ -0.22
RFC4-201ENST00000296273 HDGFL1Q5TGJ6 251 aa13.71□□□□□ -0.22
RFC4-201ENST00000296273 SAMD7Q7Z3H4 446 aa13.71□□□□□ -0.22
RFC4-201ENST00000296273 CELF1Q92879 486 aaKnown RBP13.71□□□□□ -0.22
RFC4-201ENST00000296273 DBNDD1Q9H9R9 158 aa13.71□□□□□ -0.22
RFC4-201ENST00000296273 GBA2Q9HCG7 927 aaPredicted RBP13.71□□□□□ -0.22
RFC4-201ENST00000296273 SAGE1Q9NXZ1 904 aa13.71□□□□□ -0.22
RFC4-201ENST00000296273 DDX60Q8IY21 1712 aaKnown RBP13.7□□□□□ -0.22
RFC4-201ENST00000296273 ECE2O60344 883 aa13.7□□□□□ -0.22
RFC4-201ENST00000296273 HSP90B1P14625 803 aaKnown RBP13.7□□□□□ -0.22
RFC4-201ENST00000296273 TRIM28Q13263 835 aaKnown RBP13.7□□□□□ -0.22
RFC4-201ENST00000296273 TBC1D10BQ4KMP7 808 aaPredicted RBP13.7□□□□□ -0.22
RFC4-201ENST00000296273 FAM89AQ96GI7 184 aa13.7□□□□□ -0.22
RFC4-201ENST00000296273 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
RFC4-201ENST00000296273 HYPKQ9NX55 129 aa13.7□□□□□ -0.22
RFC4-201ENST00000296273 POLLQ9UGP5 575 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms