RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 RBM8AQ9Y5S9 174 aaKnown RBP15.59■□□□□ 0.09
HPS3-201ENST00000296051 ZFYVE27Q5T4F4 411 aa15.59■□□□□ 0.09
HPS3-201ENST00000296051 RUFY1Q96T51 708 aa15.59■□□□□ 0.09
HPS3-201ENST00000296051 PALD1Q9ULE6 856 aa15.59■□□□□ 0.09
HPS3-201ENST00000296051 NSFL1CQ9UNZ2 370 aaKnown RBP15.59■□□□□ 0.09
HPS3-201ENST00000296051 NSD2O96028 1365 aa15.59■□□□□ 0.09
HPS3-201ENST00000296051 GNPATO15228 680 aa15.58■□□□□ 0.09
HPS3-201ENST00000296051 SETQ01105 290 aaPredicted RBP15.58■□□□□ 0.09
HPS3-201ENST00000296051 EIF4A2Q14240 407 aaKnown RBP15.58■□□□□ 0.09
HPS3-201ENST00000296051 KRT32Q14532 448 aa15.58■□□□□ 0.09
HPS3-201ENST00000296051 ZNF287Q9HBT7 754 aa15.58■□□□□ 0.09
HPS3-201ENST00000296051 DNMT1P26358 1616 aaKnown RBP15.58■□□□□ 0.09
HPS3-201ENST00000296051 TXLNAP40222 546 aa15.58■□□□□ 0.08
HPS3-201ENST00000296051 A0A1W2PP64 1363 aa15.58■□□□□ 0.08
HPS3-201ENST00000296051 PPFIBP1Q86W92 1011 aa15.58■□□□□ 0.08
HPS3-201ENST00000296051 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.08
HPS3-201ENST00000296051 PARP3Q9Y6F1 533 aa15.58■□□□□ 0.08
HPS3-201ENST00000296051 CCP110O43303 1012 aa15.58■□□□□ 0.08
HPS3-201ENST00000296051 ANAPC15P60006 121 aa15.58■□□□□ 0.08
HPS3-201ENST00000296051 OGFOD1Q8N543 542 aa15.58■□□□□ 0.08
HPS3-201ENST00000296051 MYRIPQ8NFW9 859 aa15.58■□□□□ 0.08
HPS3-201ENST00000296051 ACBD3Q9H3P7 528 aa15.58■□□□□ 0.08
HPS3-201ENST00000296051 TPTE2Q6XPS3 522 aa15.57■□□□□ 0.08
HPS3-201ENST00000296051 HAND2P61296 217 aa15.57■□□□□ 0.08
HPS3-201ENST00000296051 IMMTQ16891 758 aaKnown RBP15.57■□□□□ 0.08
HPS3-201ENST00000296051 KRT222Q8N1A0 295 aa15.57■□□□□ 0.08
HPS3-201ENST00000296051 JMYQ8N9B5 988 aa15.57■□□□□ 0.08
HPS3-201ENST00000296051 CHPF2Q9P2E5 772 aa15.57■□□□□ 0.08
HPS3-201ENST00000296051 ECM2O94769 699 aaPredicted RBP15.57■□□□□ 0.08
HPS3-201ENST00000296051 ATP8B2P98198 1209 aa15.57■□□□□ 0.08
HPS3-201ENST00000296051 DZIP3Q86Y13 1208 aaKnown RBP15.57■□□□□ 0.08
HPS3-201ENST00000296051 STK32BQ9NY57 414 aa15.57■□□□□ 0.08
HPS3-201ENST00000296051 DNAI1Q9UI46 699 aa15.56■□□□□ 0.08
HPS3-201ENST00000296051 CCDC96Q2M329 555 aa15.56■□□□□ 0.08
HPS3-201ENST00000296051 SMAP1Q8IYB5 467 aaPredicted RBP15.56■□□□□ 0.08
HPS3-201ENST00000296051 CCDC152Q4G0S7 254 aa15.56■□□□□ 0.08
HPS3-201ENST00000296051 ANKRD18AQ8IVF6 992 aa15.56■□□□□ 0.08
HPS3-201ENST00000296051 JDP2Q8WYK2 163 aa15.56■□□□□ 0.08
HPS3-201ENST00000296051 TOP1P11387 765 aaKnown RBP15.55■□□□□ 0.08
HPS3-201ENST00000296051 FILIP1LQ4L180 1135 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 AOPEPQ8N6M6 819 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 ZC3H12CQ9C0D7 883 aaKnown RBP15.55■□□□□ 0.08
HPS3-201ENST00000296051 BCL2L12Q9HB09 334 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 CCNL1Q9UK58 526 aaPredicted RBP15.55■□□□□ 0.08
HPS3-201ENST00000296051 AKAP4Q5JQC9 854 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 SLF2Q8IX21 1173 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 INTS4Q96HW7 963 aaKnown RBP15.55■□□□□ 0.08
HPS3-201ENST00000296051 C8orf76Q96K31 380 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 CFAP65Q6ZU64 1925 aaKnown RBP15.55■□□□□ 0.08
HPS3-201ENST00000296051 PNMA6EA0A0J9YXQ4 647 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 MYO1BO43795 1136 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 TRMT1LQ7Z2T5 733 aaKnown RBP15.55■□□□□ 0.08
HPS3-201ENST00000296051 EYA1Q99502 592 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 PAXBP1Q9Y5B6 917 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 ODF2Q5BJF6 829 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 KDM5CP41229 1560 aa15.55■□□□□ 0.08
HPS3-201ENST00000296051 LDHCP07864 332 aa15.54■□□□□ 0.08
HPS3-201ENST00000296051 STX1AQ16623 288 aa15.54■□□□□ 0.08
HPS3-201ENST00000296051 EVI5LQ96CN4 794 aa15.54■□□□□ 0.08
HPS3-201ENST00000296051 LMOD1P29536 600 aaPredicted RBP15.54■□□□□ 0.08
HPS3-201ENST00000296051 CHST3Q7LGC8 479 aa15.54■□□□□ 0.08
HPS3-201ENST00000296051 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
HPS3-201ENST00000296051 NPC1L1Q9UHC9 1359 aa15.54■□□□□ 0.08
HPS3-201ENST00000296051 SMTNL1A8MU46 457 aa15.54■□□□□ 0.08
HPS3-201ENST00000296051 ZNF500O60304 480 aaPredicted RBP15.54■□□□□ 0.08
HPS3-201ENST00000296051 ARHGAP29Q52LW3 1261 aa15.54■□□□□ 0.08
HPS3-201ENST00000296051 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
HPS3-201ENST00000296051 APBA3O96018 575 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 LRMPQ12912 555 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 MTHFSDQ2M296 383 aaKnown RBP15.53■□□□□ 0.08
HPS3-201ENST00000296051 NEK1Q96PY6 1258 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 PHAXQ9H814 394 aaKnown RBP15.53■□□□□ 0.08
HPS3-201ENST00000296051 MAP3K19Q56UN5 1328 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 BRD1O95696 1058 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 CCDC144CPQ8IYA2 1237 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 CALCOCO1Q9P1Z2 691 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 GOLIM4O00461 696 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 TRAPPC3LQ5T215 181 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 ERCC4Q92889 916 aaPredicted RBP15.53■□□□□ 0.08
HPS3-201ENST00000296051 KIF2AO00139 706 aaPredicted RBP15.53■□□□□ 0.08
HPS3-201ENST00000296051 LTKP29376 864 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 GNG11P61952 73 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 KIF4BQ2VIQ3 1234 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 INSRP06213 1382 aa15.53■□□□□ 0.08
HPS3-201ENST00000296051 CBFA2T2O43439 604 aa15.52■□□□□ 0.08
HPS3-201ENST00000296051 LMAN1P49257 510 aa15.52■□□□□ 0.08
HPS3-201ENST00000296051 TSPYL1Q9H0U9 437 aa15.52■□□□□ 0.08
HPS3-201ENST00000296051 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
HPS3-201ENST00000296051 TAF3Q5VWG9 929 aa15.52■□□□□ 0.08
HPS3-201ENST00000296051 LMBR1LQ6UX01 489 aa15.52■□□□□ 0.08
HPS3-201ENST00000296051 BCORL1Q5H9F3 1711 aa15.52■□□□□ 0.08
HPS3-201ENST00000296051 U3KPZ7 1027 aaPredicted RBP15.52■□□□□ 0.07
HPS3-201ENST00000296051 BMS1Q14692 1282 aaKnown RBP15.52■□□□□ 0.07
HPS3-201ENST00000296051 IQCA1Q86XH1 822 aa15.51■□□□□ 0.07
HPS3-201ENST00000296051 HELBQ8NG08 1087 aaPredicted RBP15.51■□□□□ 0.07
HPS3-201ENST00000296051 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
HPS3-201ENST00000296051 BAG3O95817 575 aa15.51■□□□□ 0.07
HPS3-201ENST00000296051 SYT10Q6XYQ8 523 aa15.51■□□□□ 0.07
HPS3-201ENST00000296051 SMARCE1Q969G3 411 aa15.51■□□□□ 0.07
HPS3-201ENST00000296051 DUOX2Q9NRD8 1548 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms