RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 GADD45BO75293 160 aaPredicted RBP7.35□□□□□ -1.23
VCAM1-201ENST00000294728 SURF6O75683 361 aaKnown RBP7.35□□□□□ -1.23
VCAM1-201ENST00000294728 NOLC1Q14978 699 aaKnown RBP eCLIP7.35□□□□□ -1.23
VCAM1-201ENST00000294728 UTP14CQ5TAP6 766 aaKnown RBP7.35□□□□□ -1.23
VCAM1-201ENST00000294728 IFFO2Q5TF58 517 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 LARP1Q6PKG0 1096 aaKnown RBP7.35□□□□□ -1.23
VCAM1-201ENST00000294728 CLASRPQ8N2M8 674 aaKnown RBP7.35□□□□□ -1.23
VCAM1-201ENST00000294728 NGDNQ8NEJ9 315 aaKnown RBP7.35□□□□□ -1.23
VCAM1-201ENST00000294728 IL25Q9H293 177 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 STRN4Q9NRL3 753 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 CYP46A1Q9Y6A2 500 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 C5P01031 1676 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 LAMA4Q16363 1823 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 SRGAP3O43295 1099 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 KIAA1524Q8TCG1 905 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 CHMP4CQ96CF2 233 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 SCAND2PQ9GZW5 306 aaPredicted RBP7.35□□□□□ -1.23
VCAM1-201ENST00000294728 MIS18AQ9NYP9 233 aa7.35□□□□□ -1.23
VCAM1-201ENST00000294728 CTIFO43310 598 aaKnown RBP7.34□□□□□ -1.23
VCAM1-201ENST00000294728 CCDC192P0DO97 292 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 KRT32Q14532 448 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 KSR2Q6VAB6 950 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 RASEFQ8IZ41 740 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 SGIP1Q9BQI5 828 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 CCDC94Q9BW85 323 aaPredicted RBP7.34□□□□□ -1.23
VCAM1-201ENST00000294728 BCL11BQ9C0K0 894 aaPredicted RBP7.34□□□□□ -1.23
VCAM1-201ENST00000294728 ADCY5O95622 1261 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 ZKSCAN1P17029 563 aaPredicted RBP7.34□□□□□ -1.23
VCAM1-201ENST00000294728 RNF20Q5VTR2 975 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 FBXL16Q8N461 479 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 DIAPH3Q9NSV4 1193 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 PDRG1Q9NUG6 133 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 DDX19AQ9NUU7 478 aaKnown RBP7.34□□□□□ -1.23
VCAM1-201ENST00000294728 ARFGEF2Q9Y6D5 1785 aa7.34□□□□□ -1.23
VCAM1-201ENST00000294728 AFDNP55196 1824 aaKnown RBP7.34□□□□□ -1.23
VCAM1-201ENST00000294728 EVA1CP58658 441 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 C1QTNF8P60827 252 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 LINS1Q8NG48 757 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 FAM200AQ8TCP9 573 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 UPF3BQ9BZI7 483 aaKnown RBP7.33□□□□□ -1.24
VCAM1-201ENST00000294728 APBB1O00213 710 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 NLRP6P59044 892 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 ZC3H6P61129 1189 aaKnown RBP7.33□□□□□ -1.24
VCAM1-201ENST00000294728 KRT85P78386 507 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 DHX8Q14562 1220 aaKnown RBP7.33□□□□□ -1.24
VCAM1-201ENST00000294728 PLEKHO1Q53GL0 409 aaPredicted RBP7.33□□□□□ -1.24
VCAM1-201ENST00000294728 LLPHQ9BRT6 129 aaKnown RBP7.33□□□□□ -1.24
VCAM1-201ENST00000294728 CNPY2Q9Y2B0 182 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 GJB2P29033 226 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 SARM1Q6SZW1 724 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 PROM2Q8N271 834 aa7.33□□□□□ -1.24
VCAM1-201ENST00000294728 SHANK3Q9BYB0 1731 aa7.32□□□□□ -1.24
VCAM1-201ENST00000294728 UBR2Q8IWV8 1755 aa7.32□□□□□ -1.24
VCAM1-201ENST00000294728 NEMFO60524 1076 aa7.32□□□□□ -1.24
VCAM1-201ENST00000294728 PTMAP06454 111 aaKnown RBP7.32□□□□□ -1.24
VCAM1-201ENST00000294728 NBPF7P0C2Y1 421 aaPredicted RBP7.32□□□□□ -1.24
VCAM1-201ENST00000294728 CASTP20810 708 aaKnown RBP7.32□□□□□ -1.24
VCAM1-201ENST00000294728 ST3GAL1Q11201 340 aa7.32□□□□□ -1.24
VCAM1-201ENST00000294728 TDRD7Q8NHU6 1098 aaKnown RBP7.32□□□□□ -1.24
VCAM1-201ENST00000294728 ZMYND15Q9H091 742 aa7.32□□□□□ -1.24
VCAM1-201ENST00000294728 ZSCAN16Q9H4T2 348 aaPredicted RBP7.32□□□□□ -1.24
VCAM1-201ENST00000294728 PHAXQ9H814 394 aaKnown RBP7.32□□□□□ -1.24
VCAM1-201ENST00000294728 CTAGE5O15320 804 aa7.32□□□□□ -1.24
VCAM1-201ENST00000294728 CREB3L3Q68CJ9 461 aa7.32□□□□□ -1.24
VCAM1-201ENST00000294728 NUTM1Q86Y26 1132 aa7.32□□□□□ -1.24
VCAM1-201ENST00000294728 ANKRD7Q92527 254 aa7.32□□□□□ -1.24
VCAM1-201ENST00000294728 PI4KAP2A4QPH2 592 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 RPS6KB1P23443 525 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 MAP3K11Q16584 847 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 TSHZ3Q63HK5 1081 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 PLA2G4DQ86XP0 818 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 PI4KAP1Q8N8J0 262 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 CDCA7Q9BWT1 371 aaPredicted RBP7.31□□□□□ -1.24
VCAM1-201ENST00000294728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.31□□□□□ -1.24
VCAM1-201ENST00000294728 DDX58O95786 925 aaKnown RBP7.31□□□□□ -1.24
VCAM1-201ENST00000294728 FAM193AP78312 1265 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 ME3Q16798 604 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 SYT17Q9BSW7 474 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 AGXT2Q9BYV1 514 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 CLSTN2Q9H4D0 955 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 IL1RAPL2Q9NP60 686 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 DDX21Q9NR30 783 aaKnown RBP eCLIP7.31□□□□□ -1.24
VCAM1-201ENST00000294728 CHPF2Q9P2E5 772 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 KIF3AQ9Y496 699 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 SLC27A2O14975 620 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 RNMTO43148 476 aaKnown RBP7.31□□□□□ -1.24
VCAM1-201ENST00000294728 HMGB1P09429 215 aaKnown RBP7.31□□□□□ -1.24
VCAM1-201ENST00000294728 MTFR1LQ9H019 292 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 COPRSQ9NQ92 184 aa7.31□□□□□ -1.24
VCAM1-201ENST00000294728 RBM8AQ9Y5S9 174 aaKnown RBP7.31□□□□□ -1.24
VCAM1-201ENST00000294728 GRM8O00222 908 aa7.3□□□□□ -1.24
VCAM1-201ENST00000294728 GCP02774 474 aa7.3□□□□□ -1.24
VCAM1-201ENST00000294728 TUBB4AP04350 444 aa7.3□□□□□ -1.24
VCAM1-201ENST00000294728 IFIT2P09913 472 aaKnown RBP7.3□□□□□ -1.24
VCAM1-201ENST00000294728 HCLS1P14317 486 aaPredicted RBP7.3□□□□□ -1.24
VCAM1-201ENST00000294728 ATP5JP18859 108 aa7.3□□□□□ -1.24
VCAM1-201ENST00000294728 PTH1RQ03431 593 aa7.3□□□□□ -1.24
VCAM1-201ENST00000294728 RABL6Q3YEC7 729 aaPredicted RBP7.3□□□□□ -1.24
VCAM1-201ENST00000294728 RNF214Q8ND24 703 aa7.3□□□□□ -1.24
VCAM1-201ENST00000294728 SMARCC2Q8TAQ2 1214 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms