RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 DBNLQ9UJU6 430 aaKnown RBP20.02■□□□□ 0.8
CHRNE-201ENST00000293780 USP16Q9Y5T5 823 aa20.02■□□□□ 0.8
CHRNE-201ENST00000293780 RGPD5Q99666 1765 aa20.02■□□□□ 0.8
CHRNE-201ENST00000293780 TFCP2Q12800 502 aa20.02■□□□□ 0.8
CHRNE-201ENST00000293780 CCDC129Q6ZRS4 1044 aa20.02■□□□□ 0.8
CHRNE-201ENST00000293780 DYNC1I1O14576 645 aa20.01■□□□□ 0.79
CHRNE-201ENST00000293780 ANKRD1Q15327 319 aa20.01■□□□□ 0.79
CHRNE-201ENST00000293780 ZNF496Q96IT1 587 aaPredicted RBP20.01■□□□□ 0.79
CHRNE-201ENST00000293780 CCDC192P0DO97 292 aa20.01■□□□□ 0.79
CHRNE-201ENST00000293780 SPC24Q8NBT2 197 aa20.01■□□□□ 0.79
CHRNE-201ENST00000293780 SEC62Q99442 399 aaKnown RBP20.01■□□□□ 0.79
CHRNE-201ENST00000293780 ERBB3P21860 1342 aa20.01■□□□□ 0.79
CHRNE-201ENST00000293780 JAK2O60674 1132 aa20■□□□□ 0.79
CHRNE-201ENST00000293780 RFX5P48382 616 aaPredicted RBP20■□□□□ 0.79
CHRNE-201ENST00000293780 PTPN12Q05209 780 aaKnown RBP20■□□□□ 0.79
CHRNE-201ENST00000293780 KDM6AO15550 1401 aaPredicted RBP20■□□□□ 0.79
CHRNE-201ENST00000293780 C5P01031 1676 aa20■□□□□ 0.79
CHRNE-201ENST00000293780 PDCP20941 246 aa20■□□□□ 0.79
CHRNE-201ENST00000293780 TNNI3KQ59H18 835 aa20■□□□□ 0.79
CHRNE-201ENST00000293780 ANKRD13DQ6ZTN6 518 aa20■□□□□ 0.79
CHRNE-201ENST00000293780 CKAP2LQ8IYA6 745 aa20■□□□□ 0.79
CHRNE-201ENST00000293780 ALDH8A1Q9H2A2 487 aaPredicted RBP20■□□□□ 0.79
CHRNE-201ENST00000293780 NLRP2Q9NX02 1062 aa20■□□□□ 0.79
CHRNE-201ENST00000293780 FPGT-TNNI3KV9GXZ4 949 aa20■□□□□ 0.79
CHRNE-201ENST00000293780 KCNF1Q9H3M0 494 aa19.99■□□□□ 0.79
CHRNE-201ENST00000293780 COPRSQ9NQ92 184 aa19.99■□□□□ 0.79
CHRNE-201ENST00000293780 CCDC9Q9Y3X0 531 aaKnown RBP19.99■□□□□ 0.79
CHRNE-201ENST00000293780 NPHP3Q7Z494 1330 aa19.99■□□□□ 0.79
CHRNE-201ENST00000293780 TSGA10IPQ3SY00 556 aa19.99■□□□□ 0.79
CHRNE-201ENST00000293780 LRP10Q7Z4F1 713 aa19.99■□□□□ 0.79
CHRNE-201ENST00000293780 RAPGEF4Q8WZA2 1011 aa19.99■□□□□ 0.79
CHRNE-201ENST00000293780 NUP62CLQ9H1M0 184 aa19.99■□□□□ 0.79
CHRNE-201ENST00000293780 JCADQ9P266 1359 aa19.99■□□□□ 0.79
CHRNE-201ENST00000293780 ATP5J2-PTCD1G3V325 749 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 PTCD1O75127 700 aaKnown RBP19.98■□□□□ 0.79
CHRNE-201ENST00000293780 PHKG2P15735 406 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 ATP5JP18859 108 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 MAP3K11Q16584 847 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 UBE3BQ7Z3V4 1068 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 TSC1Q92574 1164 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 DNAJC2Q99543 621 aaKnown RBP19.98■□□□□ 0.79
CHRNE-201ENST00000293780 DACT1Q9NYF0 836 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 HMG20BQ9P0W2 317 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 MRVI1Q9Y6F6 885 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 ELP1O95163 1332 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 USPL1Q5W0Q7 1092 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 SPATA32Q96LK8 384 aa19.98■□□□□ 0.79
CHRNE-201ENST00000293780 TYRO3Q06418 890 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 PROSER2Q86WR7 435 aaPredicted RBP19.97■□□□□ 0.79
CHRNE-201ENST00000293780 LEO1Q8WVC0 666 aaPredicted RBP19.97■□□□□ 0.79
CHRNE-201ENST00000293780 DDX11Q96FC9 970 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 DBNDD2Q9BQY9 259 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 PYCARDQ9ULZ3 195 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 MRC1P22897 1456 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 LUZP1Q86V48 1076 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 NEK1Q96PY6 1258 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 ARID3AQ99856 593 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 LRRC2Q9BYS8 371 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 CAMTA1Q9Y6Y1 1673 aa19.97■□□□□ 0.79
CHRNE-201ENST00000293780 ADAMTS7Q9UKP4 1686 aa19.96■□□□□ 0.79
CHRNE-201ENST00000293780 Q6ZUG5 572 aa19.96■□□□□ 0.79
CHRNE-201ENST00000293780 MYRIPQ8NFW9 859 aa19.96■□□□□ 0.79
CHRNE-201ENST00000293780 SLFNL1Q499Z3 407 aa19.96■□□□□ 0.79
CHRNE-201ENST00000293780 DDX46Q7L014 1031 aaKnown RBP19.96■□□□□ 0.79
CHRNE-201ENST00000293780 FAM200AQ8TCP9 573 aa19.96■□□□□ 0.79
CHRNE-201ENST00000293780 SPTLC3Q9NUV7 552 aa19.96■□□□□ 0.79
CHRNE-201ENST00000293780 ZNF609O15014 1411 aa19.95■□□□□ 0.78
CHRNE-201ENST00000293780 GOLGA6L4A6NEF3 574 aa19.95■□□□□ 0.78
CHRNE-201ENST00000293780 GTF3C6Q969F1 213 aa19.95■□□□□ 0.78
CHRNE-201ENST00000293780 PGBD1Q96JS3 809 aa19.95■□□□□ 0.78
CHRNE-201ENST00000293780 SCAND2PQ9GZW5 306 aaPredicted RBP19.95■□□□□ 0.78
CHRNE-201ENST00000293780 TNMDQ9H2S6 317 aa19.95■□□□□ 0.78
CHRNE-201ENST00000293780 CYP21A2P08686 494 aa19.95■□□□□ 0.78
CHRNE-201ENST00000293780 PDIA4P13667 645 aaKnown RBP19.95■□□□□ 0.78
CHRNE-201ENST00000293780 TATP17735 454 aaPredicted RBP19.95■□□□□ 0.78
CHRNE-201ENST00000293780 KLHL34Q8N239 644 aa19.95■□□□□ 0.78
CHRNE-201ENST00000293780 DDX17Q92841 729 aaKnown RBP19.94■□□□□ 0.78
CHRNE-201ENST00000293780 BRF1Q92994 677 aa19.94■□□□□ 0.78
CHRNE-201ENST00000293780 A0A087WZG4 1122 aa19.94■□□□□ 0.78
CHRNE-201ENST00000293780 NR1I2O75469 434 aa19.94■□□□□ 0.78
CHRNE-201ENST00000293780 HSP90B1P14625 803 aaKnown RBP19.94■□□□□ 0.78
CHRNE-201ENST00000293780 ANO6Q4KMQ2 910 aa19.94■□□□□ 0.78
CHRNE-201ENST00000293780 MAP7D2Q96T17 732 aa19.94■□□□□ 0.78
CHRNE-201ENST00000293780 SNRPA1P09661 255 aaKnown RBP19.93■□□□□ 0.78
CHRNE-201ENST00000293780 KIAA1524Q8TCG1 905 aa19.93■□□□□ 0.78
CHRNE-201ENST00000293780 FAM177BA6PVY3 158 aa19.93■□□□□ 0.78
CHRNE-201ENST00000293780 KRT32Q14532 448 aa19.93■□□□□ 0.78
CHRNE-201ENST00000293780 RABL6Q3YEC7 729 aaPredicted RBP19.93■□□□□ 0.78
CHRNE-201ENST00000293780 CBX8Q9HC52 389 aa19.93■□□□□ 0.78
CHRNE-201ENST00000293780 SCN11AQ9UI33 1791 aa19.92■□□□□ 0.78
CHRNE-201ENST00000293780 TRPM3Q9HCF6 1732 aaPredicted RBP19.92■□□□□ 0.78
CHRNE-201ENST00000293780 RESTQ13127 1097 aa19.92■□□□□ 0.78
CHRNE-201ENST00000293780 MCMDC2Q4G0Z9 681 aa19.92■□□□□ 0.78
CHRNE-201ENST00000293780 STOX1Q6ZVD7 989 aa19.92■□□□□ 0.78
CHRNE-201ENST00000293780 TTC5Q8N0Z6 440 aa19.92■□□□□ 0.78
CHRNE-201ENST00000293780 HAUS7Q99871 368 aa19.92■□□□□ 0.78
CHRNE-201ENST00000293780 SCRN1Q12765 414 aa19.92■□□□□ 0.78
CHRNE-201ENST00000293780 IFNL2Q8IZJ0 200 aa19.92■□□□□ 0.78
CHRNE-201ENST00000293780 MEGF6O75095 1541 aa19.92■□□□□ 0.78
CHRNE-201ENST00000293780 STRCQ7RTU9 1775 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms