RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 SOGA3Q5TF21 947 aa11.53□□□□□ -0.56
PCYT1A-201ENST00000292823 ZNF165P49910 485 aa11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 RBM5P52756 815 aaKnown RBP eCLIP11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 NOLC1Q14978 699 aaKnown RBP eCLIP11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 ATL3Q6DD88 541 aa11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 GBP3Q9H0R5 595 aa11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 CFAP100Q494V2 611 aa11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 CKAP2LQ8IYA6 745 aa11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 CDK5RAP3Q96JB5 506 aa11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 RNF41Q9H4P4 317 aaPredicted RBP11.52□□□□□ -0.56
PCYT1A-201ENST00000292823 GLI2P10070 1586 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 ANKARQ7Z5J8 1434 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 RNMTO43148 476 aaKnown RBP11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 HCLS1P14317 486 aaPredicted RBP11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 LINS1Q8NG48 757 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 UBXN4Q92575 508 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 MYO6Q9UM54 1294 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 ADGRB3O60242 1522 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 SETBP1Q9Y6X0 1596 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 ATP2B1P20020 1258 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 EPS15P42566 896 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 RUFY3Q7L099 469 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 ZGPATQ8N5A5 531 aaKnown RBP11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 ANKIB1Q9P2G1 1089 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 AK2P54819 239 aa11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 NAP1L1P55209 391 aaKnown RBP11.52□□□□□ -0.57
PCYT1A-201ENST00000292823 MCMDC2Q4G0Z9 681 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 PYM1Q9BRP8 204 aaKnown RBP11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 ATP6V1AP38606 617 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 SSRP1Q08945 709 aaKnown RBP11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 NUP133Q8WUM0 1156 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 GOLGA8BA8MQT2 603 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 KANK3Q6NY19 840 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 EYA1Q99502 592 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 RIMBP3CA6NJZ7 1639 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 RIMBP3BA6NNM3 1639 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 RIMBP3Q9UFD9 1639 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 TOP1P11387 765 aaKnown RBP11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 CCDC178Q5BJE1 867 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 TMCO3Q6UWJ1 677 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 NCOA7Q8NI08 942 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 UBE2Q2Q8WVN8 375 aa11.51□□□□□ -0.57
PCYT1A-201ENST00000292823 KDM4AO75164 1064 aa11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 KCNG4Q8TDN1 519 aa11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 A2ML1A8K2U0 1454 aa11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 IDH1O75874 414 aaKnown RBP11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 NMIQ13287 307 aaPredicted RBP11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 CAMSAP1Q5T5Y3 1602 aa11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 CASQ1P31415 396 aa11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 HSPA2P54652 639 aa11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 CNKSR2Q8WXI2 1034 aa11.5□□□□□ -0.57
PCYT1A-201ENST00000292823 CREB3L3Q68CJ9 461 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 DZIP1Q86YF9 867 aaKnown RBP11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 C8orf37Q96NL8 207 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 NEFHP12036 1026 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 MCM3P25205 808 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 UTP14AQ9BVJ6 771 aaKnown RBP11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 BCCIPQ9P287 314 aaKnown RBP eCLIP11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 SLC12A7Q9Y666 1083 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 MAP3K19Q56UN5 1328 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 NAPBQ9H115 298 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 GOLIM4O00461 696 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 CEP135Q66GS9 1140 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 PPP1R1BQ9UD71 204 aaPredicted RBP11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 GOLGA8AA7E2F4 631 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 USP5P45974 858 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 ANO6Q4KMQ2 910 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 CCDC148Q8NFR7 591 aa11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 TFIP11Q9UBB9 837 aaKnown RBP11.49□□□□□ -0.57
PCYT1A-201ENST00000292823 IL15P40933 162 aaPredicted RBP11.48□□□□□ -0.57
PCYT1A-201ENST00000292823 SETDB2Q96T68 719 aa11.48□□□□□ -0.57
PCYT1A-201ENST00000292823 DNM1Q05193 864 aaKnown RBP11.48□□□□□ -0.57
PCYT1A-201ENST00000292823 LMBRD1Q9NUN5 540 aa11.48□□□□□ -0.57
PCYT1A-201ENST00000292823 USP16Q9Y5T5 823 aa11.48□□□□□ -0.57
PCYT1A-201ENST00000292823 CDK12Q9NYV4 1490 aaPredicted RBP11.48□□□□□ -0.57
PCYT1A-201ENST00000292823 RNF17Q9BXT8 1623 aaKnown RBP11.48□□□□□ -0.57
PCYT1A-201ENST00000292823 CNNM3Q8NE01 707 aa11.48□□□□□ -0.57
PCYT1A-201ENST00000292823 CEP152O94986 1710 aa11.48□□□□□ -0.57
PCYT1A-201ENST00000292823 TYRO3Q06418 890 aa11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 NBPF6Q5VWK0 638 aa11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 NBPF5PQ86XG9 351 aaPredicted RBP11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 NECAB1Q8N987 351 aa11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 MRPS27Q92552 414 aaKnown RBP11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 NBPF4Q96M43 638 aa11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 LARP6Q9BRS8 491 aaKnown RBP11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 RRAGDQ9NQL2 400 aaPredicted RBP11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 SLAIN2Q9P270 581 aa11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 KIF5CO60282 957 aa11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 BAG3O95817 575 aa11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 ORC3Q9UBD5 711 aaPredicted RBP11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 CCT2P78371 535 aaKnown RBP11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 SNW1Q13573 536 aaKnown RBP11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 KRT24Q2M2I5 525 aa11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 ARHGAP29Q52LW3 1261 aa11.47□□□□□ -0.57
PCYT1A-201ENST00000292823 WWC2Q6AWC2 1192 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms