RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 ZNF609O15014 1411 aa17.03■□□□□ 0.32
ABCF3-201ENST00000292808 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
ABCF3-201ENST00000292808 ST18O60284 1047 aa17.02■□□□□ 0.32
ABCF3-201ENST00000292808 CIAO1O76071 339 aa17.02■□□□□ 0.32
ABCF3-201ENST00000292808 CWC27Q6UX04 472 aaKnown RBP17.02■□□□□ 0.32
ABCF3-201ENST00000292808 LSG1Q9H089 658 aaKnown RBP17.02■□□□□ 0.32
ABCF3-201ENST00000292808 CAMTA2O94983 1202 aa17.02■□□□□ 0.31
ABCF3-201ENST00000292808 ATP5JP18859 108 aa17.02■□□□□ 0.31
ABCF3-201ENST00000292808 IL15P40933 162 aaPredicted RBP17.02■□□□□ 0.31
ABCF3-201ENST00000292808 TNPO1Q92973 898 aaKnown RBP17.02■□□□□ 0.31
ABCF3-201ENST00000292808 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.31
ABCF3-201ENST00000292808 LINC00116Q8NCU8 138 aa17.01■□□□□ 0.31
ABCF3-201ENST00000292808 RAD50Q92878 1312 aa17.01■□□□□ 0.31
ABCF3-201ENST00000292808 TRAK2O60296 914 aa17.01■□□□□ 0.31
ABCF3-201ENST00000292808 MCCP23508 829 aa17.01■□□□□ 0.31
ABCF3-201ENST00000292808 EDC3Q96F86 508 aaKnown RBP17.01■□□□□ 0.31
ABCF3-201ENST00000292808 GPR108Q9NPR9 543 aa17.01■□□□□ 0.31
ABCF3-201ENST00000292808 EPB41L2O43491 1005 aaKnown RBP17■□□□□ 0.31
ABCF3-201ENST00000292808 FAM182BQ5T319 152 aa17■□□□□ 0.31
ABCF3-201ENST00000292808 L1TD1Q5T7N2 865 aaKnown RBP17■□□□□ 0.31
ABCF3-201ENST00000292808 IL27Q8NEV9 243 aa17■□□□□ 0.31
ABCF3-201ENST00000292808 TTLL11Q8NHH1 800 aa17■□□□□ 0.31
ABCF3-201ENST00000292808 SBF2Q86WG5 1849 aa17■□□□□ 0.31
ABCF3-201ENST00000292808 AFF2P51816 1311 aa17■□□□□ 0.31
ABCF3-201ENST00000292808 KCNQ4P56696 695 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 DIAPH3Q9NSV4 1193 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 BRPF3Q9ULD4 1205 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 ATRNO75882 1429 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 RIC1Q4ADV7 1423 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
ABCF3-201ENST00000292808 HSPA4P34932 840 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 GBP4Q96PP9 640 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 TRMT112Q9UI30 125 aaKnown RBP16.99■□□□□ 0.31
ABCF3-201ENST00000292808 NDUFB9Q9Y6M9 179 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 LRP5O75197 1615 aa16.99■□□□□ 0.31
ABCF3-201ENST00000292808 IRS4O14654 1257 aaPredicted RBP16.98■□□□□ 0.31
ABCF3-201ENST00000292808 NEK4P51957 841 aa16.98■□□□□ 0.31
ABCF3-201ENST00000292808 CTSWP56202 376 aa16.98■□□□□ 0.31
ABCF3-201ENST00000292808 GJD4Q96KN9 370 aaPredicted RBP16.98■□□□□ 0.31
ABCF3-201ENST00000292808 GREM2Q9H772 168 aa16.98■□□□□ 0.31
ABCF3-201ENST00000292808 PTMSP20962 102 aa16.98■□□□□ 0.31
ABCF3-201ENST00000292808 ANAPC15P60006 121 aa16.98■□□□□ 0.31
ABCF3-201ENST00000292808 TIMM10P62072 90 aa16.98■□□□□ 0.31
ABCF3-201ENST00000292808 SUSD4Q5VX71 490 aa16.98■□□□□ 0.31
ABCF3-201ENST00000292808 CLEC17AQ6ZS10 378 aa16.98■□□□□ 0.31
ABCF3-201ENST00000292808 FAM227BQ96M60 508 aa16.98■□□□□ 0.31
ABCF3-201ENST00000292808 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
ABCF3-201ENST00000292808 LAMB2P55268 1798 aa16.97■□□□□ 0.31
ABCF3-201ENST00000292808 SSFA2P28290 1259 aa16.97■□□□□ 0.31
ABCF3-201ENST00000292808 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
ABCF3-201ENST00000292808 SNRKQ9NRH2 765 aa16.97■□□□□ 0.31
ABCF3-201ENST00000292808 A0A0D9SFI3 127 aa16.96■□□□□ 0.31
ABCF3-201ENST00000292808 PTH1RQ03431 593 aa16.96■□□□□ 0.31
ABCF3-201ENST00000292808 IFIT5Q13325 482 aaKnown RBP16.96■□□□□ 0.31
ABCF3-201ENST00000292808 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
ABCF3-201ENST00000292808 HAUS7Q99871 368 aa16.96■□□□□ 0.31
ABCF3-201ENST00000292808 FBXO3Q9UK99 471 aa16.96■□□□□ 0.31
ABCF3-201ENST00000292808 LY75O60449 1722 aa16.96■□□□□ 0.31
ABCF3-201ENST00000292808 SCN7AQ01118 1682 aa16.96■□□□□ 0.31
ABCF3-201ENST00000292808 A0A1B0GUL7 405 aa16.96■□□□□ 0.31
ABCF3-201ENST00000292808 FSD2A1L4K1 749 aa16.96■□□□□ 0.31
ABCF3-201ENST00000292808 FSD1Q9BTV5 496 aa16.96■□□□□ 0.31
ABCF3-201ENST00000292808 ITGA6P23229 1130 aa16.95■□□□□ 0.3
ABCF3-201ENST00000292808 NEUROD6Q96NK8 337 aa16.95■□□□□ 0.3
ABCF3-201ENST00000292808 GZF1Q9H116 711 aaPredicted RBP16.95■□□□□ 0.3
ABCF3-201ENST00000292808 MED23Q9ULK4 1368 aa16.95■□□□□ 0.3
ABCF3-201ENST00000292808 ONECUT3O60422 494 aaPredicted RBP16.95■□□□□ 0.3
ABCF3-201ENST00000292808 PDE8AO60658 829 aa16.95■□□□□ 0.3
ABCF3-201ENST00000292808 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
ABCF3-201ENST00000292808 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
ABCF3-201ENST00000292808 TAF1LQ8IZX4 1826 aa16.95■□□□□ 0.3
ABCF3-201ENST00000292808 CHGBP05060 677 aa16.94■□□□□ 0.3
ABCF3-201ENST00000292808 NOL8Q76FK4 1167 aaKnown RBP16.94■□□□□ 0.3
ABCF3-201ENST00000292808 RASEFQ8IZ41 740 aa16.94■□□□□ 0.3
ABCF3-201ENST00000292808 ZGPATQ8N5A5 531 aaKnown RBP16.94■□□□□ 0.3
ABCF3-201ENST00000292808 RIPOR2Q9Y4F9 1068 aa16.94■□□□□ 0.3
ABCF3-201ENST00000292808 SKOR2Q2VWA4 1001 aaPredicted RBP16.94■□□□□ 0.3
ABCF3-201ENST00000292808 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
ABCF3-201ENST00000292808 CEP126Q9P2H0 1117 aa16.94■□□□□ 0.3
ABCF3-201ENST00000292808 SNX14Q9Y5W7 946 aa16.94■□□□□ 0.3
ABCF3-201ENST00000292808 RFX7Q2KHR2 1363 aa16.93■□□□□ 0.3
ABCF3-201ENST00000292808 HIP1O00291 1037 aa16.93■□□□□ 0.3
ABCF3-201ENST00000292808 NTSR2O95665 410 aa16.93■□□□□ 0.3
ABCF3-201ENST00000292808 ADORA1P30542 326 aa16.93■□□□□ 0.3
ABCF3-201ENST00000292808 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
ABCF3-201ENST00000292808 UPF3BQ9BZI7 483 aaKnown RBP16.93■□□□□ 0.3
ABCF3-201ENST00000292808 CWC22Q9HCG8 908 aaKnown RBP16.93■□□□□ 0.3
ABCF3-201ENST00000292808 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
ABCF3-201ENST00000292808 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
ABCF3-201ENST00000292808 CASZ1Q86V15 1759 aa16.93■□□□□ 0.3
ABCF3-201ENST00000292808 COL4A1P02462 1669 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 GOLGA6L3A6NEY3 463 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 FAM177BA6PVY3 158 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 HCLS1P14317 486 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-201ENST00000292808 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 UTP14AQ9BVJ6 771 aaKnown RBP16.92■□□□□ 0.3
ABCF3-201ENST00000292808 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 ANKRD18BA2A2Z9 1011 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 NUCB2P80303 420 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms