RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 C21orf2O43822 256 aa33.99■■■■□ 3.03
SSU72-201ENST00000291386 CCDC152Q4G0S7 254 aa33.99■■■■□ 3.03
SSU72-201ENST00000291386 CTSWP56202 376 aa33.98■■■■□ 3.03
SSU72-201ENST00000291386 GRAPQ13588 217 aa33.98■■■■□ 3.03
SSU72-201ENST00000291386 GRAPLQ8TC17 118 aaPredicted RBP33.98■■■■□ 3.03
SSU72-201ENST00000291386 RCAN3Q9UKA8 241 aa33.98■■■■□ 3.03
SSU72-201ENST00000291386 FER1L6Q2WGJ9 1857 aa33.97■■■■□ 3.03
SSU72-201ENST00000291386 BBOX1O75936 387 aa33.97■■■■□ 3.03
SSU72-201ENST00000291386 INTS3Q68E01 1043 aaKnown RBP33.97■■■■□ 3.03
SSU72-201ENST00000291386 ARHGAP27Q6ZUM4 889 aa33.97■■■■□ 3.03
SSU72-201ENST00000291386 TTLL11Q8NHH1 800 aa33.97■■■■□ 3.03
SSU72-201ENST00000291386 RTL9Q8NET4 1388 aa33.97■■■■□ 3.03
SSU72-201ENST00000291386 TAF1P21675 1872 aa33.96■■■■□ 3.03
SSU72-201ENST00000291386 CSF1RP07333 972 aa33.95■■■■□ 3.03
SSU72-201ENST00000291386 CC2D2BQ6DHV5 1058 aa33.95■■■■□ 3.03
SSU72-201ENST00000291386 USP44Q9H0E7 712 aa33.95■■■■□ 3.03
SSU72-201ENST00000291386 PPEF1O14829 653 aaPredicted RBP33.94■■■■□ 3.02
SSU72-201ENST00000291386 NBPF7P0C2Y1 421 aaPredicted RBP33.94■■■■□ 3.02
SSU72-201ENST00000291386 TMC4Q7Z404 712 aa33.94■■■■□ 3.02
SSU72-201ENST00000291386 UTRNP46939 3433 aa33.94■■■■□ 3.02
SSU72-201ENST00000291386 CCDC93Q567U6 631 aa33.93■■■■□ 3.02
SSU72-201ENST00000291386 ZNF219Q9P2Y4 722 aaPredicted RBP33.93■■■■□ 3.02
SSU72-201ENST00000291386 FOXO4P98177 505 aa33.92■■■■□ 3.02
SSU72-201ENST00000291386 SNED1Q8TER0 1413 aa33.92■■■■□ 3.02
SSU72-201ENST00000291386 LTBP3Q9NS15 1303 aa33.91■■■■□ 3.02
SSU72-201ENST00000291386 GRIPAP1Q4V328 841 aa33.91■■■■□ 3.02
SSU72-201ENST00000291386 CELF1Q92879 486 aaKnown RBP33.91■■■■□ 3.02
SSU72-201ENST00000291386 TNNQ9UQP3 1299 aa33.91■■■■□ 3.02
SSU72-201ENST00000291386 ATP6V0A2Q9Y487 856 aa33.91■■■■□ 3.02
SSU72-201ENST00000291386 SBF1O95248 1867 aa33.9■■■■□ 3.02
SSU72-201ENST00000291386 SP8Q8IXZ3 490 aa33.9■■■■□ 3.02
SSU72-201ENST00000291386 SEC31BQ9NQW1 1179 aa33.9■■■■□ 3.02
SSU72-201ENST00000291386 COL4A1P02462 1669 aa33.9■■■■□ 3.02
SSU72-201ENST00000291386 NFKBIEO00221 500 aa33.89■■■■□ 3.02
SSU72-201ENST00000291386 RPS8P62241 208 aaKnown RBP33.89■■■■□ 3.02
SSU72-201ENST00000291386 RTKN2Q8IZC4 609 aa33.89■■■■□ 3.02
SSU72-201ENST00000291386 KAZALD1Q96I82 304 aa33.89■■■■□ 3.02
SSU72-201ENST00000291386 SUCLG2Q96I99 432 aa33.89■■■■□ 3.02
SSU72-201ENST00000291386 GREM2Q9H772 168 aa33.89■■■■□ 3.02
SSU72-201ENST00000291386 LRRC37AA6NMS7 1700 aa33.88■■■■□ 3.01
SSU72-201ENST00000291386 EPHA10Q5JZY3 1008 aa33.88■■■■□ 3.01
SSU72-201ENST00000291386 CCDC85AQ96PX6 553 aaPredicted RBP33.88■■■■□ 3.01
SSU72-201ENST00000291386 OLFM4Q6UX06 510 aa33.87■■■■□ 3.01
SSU72-201ENST00000291386 CLUAP1Q96AJ1 413 aa33.87■■■■□ 3.01
SSU72-201ENST00000291386 DZIP1LQ8IYY4 767 aaKnown RBP33.86■■■■□ 3.01
SSU72-201ENST00000291386 CDC5LQ99459 802 aaKnown RBP33.86■■■■□ 3.01
SSU72-201ENST00000291386 TMX4Q9H1E5 349 aaPredicted RBP33.85■■■■□ 3.01
SSU72-201ENST00000291386 TAOK3Q9H2K8 898 aa33.85■■■■□ 3.01
SSU72-201ENST00000291386 RASSF7Q02833 373 aa33.84■■■■□ 3.01
SSU72-201ENST00000291386 RABL6Q3YEC7 729 aaPredicted RBP33.84■■■■□ 3.01
SSU72-201ENST00000291386 LMBR1LQ6UX01 489 aa33.84■■■■□ 3.01
SSU72-201ENST00000291386 ITGA6P23229 1130 aa33.83■■■■□ 3.01
SSU72-201ENST00000291386 FKBP4Q02790 459 aaKnown RBP eCLIP33.83■■■■□ 3.01
SSU72-201ENST00000291386 FAM161AQ3B820 660 aa33.83■■■■□ 3.01
SSU72-201ENST00000291386 ANKRD18AQ8IVF6 992 aa33.83■■■■□ 3.01
SSU72-201ENST00000291386 FTSJ3Q8IY81 847 aaKnown RBP33.83■■■■□ 3.01
SSU72-201ENST00000291386 TMEM57Q8N5G2 664 aa33.83■■■■□ 3.01
SSU72-201ENST00000291386 PSMD1Q99460 953 aa33.83■■■■□ 3.01
SSU72-201ENST00000291386 HDAC5Q9UQL6 1122 aa33.83■■■■□ 3.01
SSU72-201ENST00000291386 MS4A1P11836 297 aa33.82■■■■□ 3
SSU72-201ENST00000291386 CCDC88AQ3V6T2 1871 aa33.82■■■■□ 3
SSU72-201ENST00000291386 UBTFL1P0CB47 393 aaPredicted RBP33.81■■■■□ 3
SSU72-201ENST00000291386 BICC1Q9H694 974 aaKnown RBP33.81■■■■□ 3
SSU72-201ENST00000291386 RLBP1P12271 317 aa33.8■■■■□ 3
SSU72-201ENST00000291386 LMNB1P20700 586 aa33.8■■■■□ 3
SSU72-201ENST00000291386 PRELPP51888 382 aa33.8■■■■□ 3
SSU72-201ENST00000291386 SLC51AQ86UW1 340 aa33.8■■■■□ 3
SSU72-201ENST00000291386 ANKRD44Q8N8A2 993 aa33.8■■■■□ 3
SSU72-201ENST00000291386 DICER1Q9UPY3 1922 aaKnown RBP33.79■■■■□ 3
SSU72-201ENST00000291386 ANKRD18BA2A2Z9 1011 aa33.79■■■■□ 3
SSU72-201ENST00000291386 GNAI3P08754 354 aa33.79■■■■□ 3
SSU72-201ENST00000291386 MEIS3Q99687 375 aa33.79■■■■□ 3
SSU72-201ENST00000291386 BSDC1Q9NW68 430 aaPredicted RBP33.79■■■■□ 3
SSU72-201ENST00000291386 IFIT5Q13325 482 aaKnown RBP33.78■■■■□ 3
SSU72-201ENST00000291386 RTFDC1Q9BY42 306 aaPredicted RBP33.78■■■■□ 3
SSU72-201ENST00000291386 C9orf131Q5VYM1 1079 aa33.77■■■■□ 3
SSU72-201ENST00000291386 SPEF2Q9C093 1822 aa33.76■■■■□ 3
SSU72-201ENST00000291386 IGHMBP2P38935 993 aaKnown RBP33.76■■■□□ 2.99
SSU72-201ENST00000291386 MPNDQ8N594 471 aa33.76■■■□□ 2.99
SSU72-201ENST00000291386 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.76■■■□□ 2.99
SSU72-201ENST00000291386 CHMP3Q9Y3E7 222 aa33.76■■■□□ 2.99
SSU72-201ENST00000291386 LTBP1Q14766 1721 aa33.76■■■□□ 2.99
SSU72-201ENST00000291386 CCDC57Q2TAC2 916 aa33.75■■■□□ 2.99
SSU72-201ENST00000291386 RNF181Q9P0P0 153 aa33.75■■■□□ 2.99
SSU72-201ENST00000291386 YY1P25490 414 aa33.74■■■□□ 2.99
SSU72-201ENST00000291386 DPP8Q6V1X1 898 aaPredicted RBP33.74■■■□□ 2.99
SSU72-201ENST00000291386 VPS33BQ9H267 617 aa33.74■■■□□ 2.99
SSU72-201ENST00000291386 PODXL2Q9NZ53 605 aa33.74■■■□□ 2.99
SSU72-201ENST00000291386 SUPT20HQ8NEM7 779 aa33.73■■■□□ 2.99
SSU72-201ENST00000291386 ZC3H4Q9UPT8 1303 aaKnown RBP33.73■■■□□ 2.99
SSU72-201ENST00000291386 DUOX1Q9NRD9 1551 aa33.72■■■□□ 2.99
SSU72-201ENST00000291386 PLIN1O60240 522 aa33.72■■■□□ 2.99
SSU72-201ENST00000291386 PANK1Q8TE04 598 aa33.72■■■□□ 2.99
SSU72-201ENST00000291386 LRRFIP2Q9Y608 721 aaKnown RBP33.72■■■□□ 2.99
SSU72-201ENST00000291386 GPSM2P81274 684 aa33.71■■■□□ 2.99
SSU72-201ENST00000291386 PDE3AQ14432 1141 aa33.71■■■□□ 2.99
SSU72-201ENST00000291386 ITPRIPQ8IWB1 547 aa33.71■■■□□ 2.99
SSU72-201ENST00000291386 MPHOSPH8Q99549 860 aa33.71■■■□□ 2.99
SSU72-201ENST00000291386 ZNF277Q9NRM2 450 aaPredicted RBP33.71■■■□□ 2.99
SSU72-201ENST00000291386 ZBTB7BO15156 539 aaPredicted RBP33.7■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms