RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 FAM227BQ96M60 508 aa20.31■□□□□ 0.84
HIF3A-203ENST00000291300 GREM2Q9H772 168 aa20.31■□□□□ 0.84
HIF3A-203ENST00000291300 CDHR2Q9BYE9 1310 aa20.31■□□□□ 0.84
HIF3A-203ENST00000291300 DDIT3P35638 169 aa20.3■□□□□ 0.84
HIF3A-203ENST00000291300 TTLL11Q8NHH1 800 aa20.3■□□□□ 0.84
HIF3A-203ENST00000291300 IRS4O14654 1257 aaPredicted RBP20.3■□□□□ 0.84
HIF3A-203ENST00000291300 IL15P40933 162 aaPredicted RBP20.3■□□□□ 0.84
HIF3A-203ENST00000291300 CCDC57Q2TAC2 916 aa20.3■□□□□ 0.84
HIF3A-203ENST00000291300 SUSD4Q5VX71 490 aa20.3■□□□□ 0.84
HIF3A-203ENST00000291300 SMARCC1Q92922 1105 aaPredicted RBP20.3■□□□□ 0.84
HIF3A-203ENST00000291300 NEUROD6Q96NK8 337 aa20.3■□□□□ 0.84
HIF3A-203ENST00000291300 DIAPH3Q9NSV4 1193 aa20.3■□□□□ 0.84
HIF3A-203ENST00000291300 ATP5JP18859 108 aa20.29■□□□□ 0.84
HIF3A-203ENST00000291300 PTH1RQ03431 593 aa20.29■□□□□ 0.84
HIF3A-203ENST00000291300 NMIQ13287 307 aaPredicted RBP20.29■□□□□ 0.84
HIF3A-203ENST00000291300 GJD4Q96KN9 370 aaPredicted RBP20.29■□□□□ 0.84
HIF3A-203ENST00000291300 BTAF1O14981 1849 aa20.28■□□□□ 0.84
HIF3A-203ENST00000291300 MYH3P11055 1940 aa20.28■□□□□ 0.84
HIF3A-203ENST00000291300 RAD50Q92878 1312 aa20.28■□□□□ 0.84
HIF3A-203ENST00000291300 ZNF609O15014 1411 aa20.28■□□□□ 0.84
HIF3A-203ENST00000291300 CIAO1O76071 339 aa20.27■□□□□ 0.84
HIF3A-203ENST00000291300 HSPA4P34932 840 aa20.27■□□□□ 0.84
HIF3A-203ENST00000291300 CTSWP56202 376 aa20.27■□□□□ 0.84
HIF3A-203ENST00000291300 FSD1Q9BTV5 496 aa20.27■□□□□ 0.84
HIF3A-203ENST00000291300 A0A0D9SFI3 127 aa20.27■□□□□ 0.84
HIF3A-203ENST00000291300 DNAJC2Q99543 621 aaKnown RBP20.27■□□□□ 0.84
HIF3A-203ENST00000291300 HCLS1P14317 486 aaPredicted RBP20.26■□□□□ 0.83
HIF3A-203ENST00000291300 ITGA6P23229 1130 aa20.26■□□□□ 0.83
HIF3A-203ENST00000291300 IFIT5Q13325 482 aaKnown RBP20.26■□□□□ 0.83
HIF3A-203ENST00000291300 RASEFQ8IZ41 740 aa20.26■□□□□ 0.83
HIF3A-203ENST00000291300 A0A1B0GUL7 405 aa20.26■□□□□ 0.83
HIF3A-203ENST00000291300 ADORA1P30542 326 aa20.25■□□□□ 0.83
HIF3A-203ENST00000291300 NEK4P51957 841 aa20.25■□□□□ 0.83
HIF3A-203ENST00000291300 EP400Q96L91 3159 aa20.25■□□□□ 0.83
HIF3A-203ENST00000291300 RIC1Q4ADV7 1423 aa20.24■□□□□ 0.83
HIF3A-203ENST00000291300 SLFNL1Q499Z3 407 aa20.24■□□□□ 0.83
HIF3A-203ENST00000291300 HAUS7Q99871 368 aa20.24■□□□□ 0.83
HIF3A-203ENST00000291300 UPF3BQ9BZI7 483 aaKnown RBP20.24■□□□□ 0.83
HIF3A-203ENST00000291300 GPR108Q9NPR9 543 aa20.24■□□□□ 0.83
HIF3A-203ENST00000291300 ZNF831Q5JPB2 1677 aa20.24■□□□□ 0.83
HIF3A-203ENST00000291300 DDX46Q7L014 1031 aaKnown RBP20.24■□□□□ 0.83
HIF3A-203ENST00000291300 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
HIF3A-203ENST00000291300 NHSQ6T4R5 1651 aa20.24■□□□□ 0.83
HIF3A-203ENST00000291300 PDE8AO60658 829 aa20.23■□□□□ 0.83
HIF3A-203ENST00000291300 MCCP23508 829 aa20.23■□□□□ 0.83
HIF3A-203ENST00000291300 TAF7LQ5H9L4 462 aa20.23■□□□□ 0.83
HIF3A-203ENST00000291300 IL17RAQ96F46 866 aa20.23■□□□□ 0.83
HIF3A-203ENST00000291300 CHMP5Q9NZZ3 219 aa20.23■□□□□ 0.83
HIF3A-203ENST00000291300 CEP126Q9P2H0 1117 aa20.23■□□□□ 0.83
HIF3A-203ENST00000291300 SNX14Q9Y5W7 946 aa20.23■□□□□ 0.83
HIF3A-203ENST00000291300 ZNF589Q86UQ0 364 aaPredicted RBP20.23■□□□□ 0.83
HIF3A-203ENST00000291300 NIP7Q9Y221 180 aaKnown RBP eCLIP20.23■□□□□ 0.83
HIF3A-203ENST00000291300 RIPOR2Q9Y4F9 1068 aa20.23■□□□□ 0.83
HIF3A-203ENST00000291300 ATRNO75882 1429 aa20.22■□□□□ 0.83
HIF3A-203ENST00000291300 BCORQ6W2J9 1755 aa20.22■□□□□ 0.83
HIF3A-203ENST00000291300 ANAPC15P60006 121 aa20.22■□□□□ 0.83
HIF3A-203ENST00000291300 RUFY2Q8WXA3 655 aa20.22■□□□□ 0.83
HIF3A-203ENST00000291300 DDX60Q8IY21 1712 aaKnown RBP20.22■□□□□ 0.83
HIF3A-203ENST00000291300 KIAA1211Q6ZU35 1233 aa20.21■□□□□ 0.83
HIF3A-203ENST00000291300 SBF2Q86WG5 1849 aa20.21■□□□□ 0.83
HIF3A-203ENST00000291300 ST18O60284 1047 aa20.21■□□□□ 0.83
HIF3A-203ENST00000291300 NTSR2O95665 410 aa20.21■□□□□ 0.83
HIF3A-203ENST00000291300 HSP90AA1P07900 732 aaKnown RBP20.21■□□□□ 0.83
HIF3A-203ENST00000291300 LDHAL6AQ6ZMR3 332 aa20.21■□□□□ 0.83
HIF3A-203ENST00000291300 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
HIF3A-203ENST00000291300 SEPT12Q8IYM1 358 aa20.21■□□□□ 0.83
HIF3A-203ENST00000291300 SEC62Q99442 399 aaKnown RBP20.21■□□□□ 0.83
HIF3A-203ENST00000291300 UTP14AQ9BVJ6 771 aaKnown RBP20.21■□□□□ 0.83
HIF3A-203ENST00000291300 COL4A1P02462 1669 aa20.21■□□□□ 0.83
HIF3A-203ENST00000291300 ANKRD18BA2A2Z9 1011 aa20.2■□□□□ 0.82
HIF3A-203ENST00000291300 XAGE2Q96GT9 111 aa20.2■□□□□ 0.82
HIF3A-203ENST00000291300 SH3TC1Q8TE82 1336 aa20.2■□□□□ 0.82
HIF3A-203ENST00000291300 GOLIM4O00461 696 aa20.2■□□□□ 0.82
HIF3A-203ENST00000291300 EPB41L2O43491 1005 aaKnown RBP20.2■□□□□ 0.82
HIF3A-203ENST00000291300 COL9A3Q14050 684 aaPredicted RBP20.2■□□□□ 0.82
HIF3A-203ENST00000291300 CCDC171Q6TFL3 1326 aa20.2■□□□□ 0.82
HIF3A-203ENST00000291300 SEC31BQ9NQW1 1179 aa20.2■□□□□ 0.82
HIF3A-203ENST00000291300 MED23Q9ULK4 1368 aa20.2■□□□□ 0.82
HIF3A-203ENST00000291300 ONECUT3O60422 494 aaPredicted RBP20.19■□□□□ 0.82
HIF3A-203ENST00000291300 CPA1P15085 419 aa20.19■□□□□ 0.82
HIF3A-203ENST00000291300 SCARF1Q14162 830 aa20.19■□□□□ 0.82
HIF3A-203ENST00000291300 PRPF40BQ6NWY9 871 aaKnown RBP20.19■□□□□ 0.82
HIF3A-203ENST00000291300 CCDC129Q6ZRS4 1044 aa20.19■□□□□ 0.82
HIF3A-203ENST00000291300 ZGPATQ8N5A5 531 aaKnown RBP20.19■□□□□ 0.82
HIF3A-203ENST00000291300 SNRKQ9NRH2 765 aa20.19■□□□□ 0.82
HIF3A-203ENST00000291300 METTL24Q5JXM2 366 aa20.18■□□□□ 0.82
HIF3A-203ENST00000291300 BCL2L12Q9HB09 334 aa20.18■□□□□ 0.82
HIF3A-203ENST00000291300 FBXO3Q9UK99 471 aa20.18■□□□□ 0.82
HIF3A-203ENST00000291300 CNTNAP4Q9C0A0 1308 aa20.18■□□□□ 0.82
HIF3A-203ENST00000291300 ADCK5Q3MIX3 580 aa20.18■□□□□ 0.82
HIF3A-203ENST00000291300 VGLL2Q8N8G2 317 aa20.18■□□□□ 0.82
HIF3A-203ENST00000291300 CNNM1Q9NRU3 951 aa20.18■□□□□ 0.82
HIF3A-203ENST00000291300 PAG1Q9NWQ8 432 aa20.18■□□□□ 0.82
HIF3A-203ENST00000291300 SRP68Q9UHB9 627 aaKnown RBP20.18■□□□□ 0.82
HIF3A-203ENST00000291300 TAF6LQ9Y6J9 622 aa20.18■□□□□ 0.82
HIF3A-203ENST00000291300 HIP1O00291 1037 aa20.17■□□□□ 0.82
HIF3A-203ENST00000291300 NECTIN1Q15223 517 aa20.17■□□□□ 0.82
HIF3A-203ENST00000291300 HELBQ8NG08 1087 aaPredicted RBP20.17■□□□□ 0.82
HIF3A-203ENST00000291300 CCNL1Q9UK58 526 aaPredicted RBP20.17■□□□□ 0.82
HIF3A-203ENST00000291300 TRPC5Q9UL62 973 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms