RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 CCDC85AQ96PX6 553 aaPredicted RBP19.31■□□□□ 0.68
NCK1-201ENST00000288986 N4BP2Q86UW6 1770 aaPredicted RBP19.3■□□□□ 0.68
NCK1-201ENST00000288986 SF3B3Q15393 1217 aaKnown RBP19.29■□□□□ 0.68
NCK1-201ENST00000288986 TTLL6Q8N841 843 aa19.29■□□□□ 0.68
NCK1-201ENST00000288986 RBM17Q96I25 401 aaKnown RBP19.29■□□□□ 0.68
NCK1-201ENST00000288986 BCS1LQ9Y276 419 aa19.29■□□□□ 0.68
NCK1-201ENST00000288986 UTYO14607 1347 aa19.29■□□□□ 0.68
NCK1-201ENST00000288986 ALDH1B1P30837 517 aa19.29■□□□□ 0.68
NCK1-201ENST00000288986 CTSWP56202 376 aa19.29■□□□□ 0.68
NCK1-201ENST00000288986 DALRD3Q5D0E6 543 aaKnown RBP19.29■□□□□ 0.68
NCK1-201ENST00000288986 STYK1Q6J9G0 422 aa19.29■□□□□ 0.68
NCK1-201ENST00000288986 TNRC6CQ9HCJ0 1690 aaKnown RBP19.28■□□□□ 0.68
NCK1-201ENST00000288986 UBTFL1P0CB47 393 aaPredicted RBP19.28■□□□□ 0.68
NCK1-201ENST00000288986 CCDC152Q4G0S7 254 aa19.28■□□□□ 0.68
NCK1-201ENST00000288986 DDX46Q7L014 1031 aaKnown RBP19.28■□□□□ 0.68
NCK1-201ENST00000288986 CNKSR1Q969H4 720 aa19.28■□□□□ 0.68
NCK1-201ENST00000288986 SUCLG2Q96I99 432 aa19.28■□□□□ 0.68
NCK1-201ENST00000288986 MEIS3Q99687 375 aa19.28■□□□□ 0.68
NCK1-201ENST00000288986 PLA2G12BQ9BX93 195 aa19.28■□□□□ 0.68
NCK1-201ENST00000288986 GPR162Q16538 588 aa19.27■□□□□ 0.68
NCK1-201ENST00000288986 TTLL11Q8NHH1 800 aa19.27■□□□□ 0.68
NCK1-201ENST00000288986 HOXA10P31260 410 aaPredicted RBP19.27■□□□□ 0.67
NCK1-201ENST00000288986 GNAI3P08754 354 aa19.26■□□□□ 0.67
NCK1-201ENST00000288986 FOXO4P98177 505 aa19.26■□□□□ 0.67
NCK1-201ENST00000288986 EPHA10Q5JZY3 1008 aa19.26■□□□□ 0.67
NCK1-201ENST00000288986 CHMP3Q9Y3E7 222 aa19.26■□□□□ 0.67
NCK1-201ENST00000288986 KDM2BQ8NHM5 1336 aa19.26■□□□□ 0.67
NCK1-201ENST00000288986 DDX60Q8IY21 1712 aaKnown RBP19.26■□□□□ 0.67
NCK1-201ENST00000288986 CRAMP1Q96RY5 1269 aa19.25■□□□□ 0.67
NCK1-201ENST00000288986 KIAA1551Q9HCM1 1747 aa19.25■□□□□ 0.67
NCK1-201ENST00000288986 DDX19BQ9UMR2 479 aa19.25■□□□□ 0.67
NCK1-201ENST00000288986 HDAC5Q9UQL6 1122 aa19.25■□□□□ 0.67
NCK1-201ENST00000288986 PRPF40BQ6NWY9 871 aaKnown RBP19.25■□□□□ 0.67
NCK1-201ENST00000288986 LMBR1LQ6UX01 489 aa19.25■□□□□ 0.67
NCK1-201ENST00000288986 KAZALD1Q96I82 304 aa19.25■□□□□ 0.67
NCK1-201ENST00000288986 BICC1Q9H694 974 aaKnown RBP19.25■□□□□ 0.67
NCK1-201ENST00000288986 GREM2Q9H772 168 aa19.25■□□□□ 0.67
NCK1-201ENST00000288986 SEC31BQ9NQW1 1179 aa19.25■□□□□ 0.67
NCK1-201ENST00000288986 ZNF219Q9P2Y4 722 aaPredicted RBP19.25■□□□□ 0.67
NCK1-201ENST00000288986 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
NCK1-201ENST00000288986 CSF1RP07333 972 aa19.24■□□□□ 0.67
NCK1-201ENST00000288986 COL11A2P13942 1736 aaPredicted RBP19.24■□□□□ 0.67
NCK1-201ENST00000288986 ZBTB7BO15156 539 aaPredicted RBP19.23■□□□□ 0.67
NCK1-201ENST00000288986 LRRFIP2Q9Y608 721 aaKnown RBP19.23■□□□□ 0.67
NCK1-201ENST00000288986 YBX3P16989 372 aaKnown RBP eCLIP19.23■□□□□ 0.67
NCK1-201ENST00000288986 GRAPQ13588 217 aa19.23■□□□□ 0.67
NCK1-201ENST00000288986 GRAPLQ8TC17 118 aaPredicted RBP19.23■□□□□ 0.67
NCK1-201ENST00000288986 C21orf2O43822 256 aa19.22■□□□□ 0.67
NCK1-201ENST00000288986 ITGA6P23229 1130 aa19.22■□□□□ 0.67
NCK1-201ENST00000288986 FAM161AQ3B820 660 aa19.22■□□□□ 0.67
NCK1-201ENST00000288986 CELF1Q92879 486 aaKnown RBP19.22■□□□□ 0.67
NCK1-201ENST00000288986 BBOX1O75936 387 aa19.21■□□□□ 0.67
NCK1-201ENST00000288986 GNAI2P04899 355 aa19.21■□□□□ 0.67
NCK1-201ENST00000288986 RPS8P62241 208 aaKnown RBP19.21■□□□□ 0.67
NCK1-201ENST00000288986 IFIT5Q13325 482 aaKnown RBP19.21■□□□□ 0.67
NCK1-201ENST00000288986 CCDC57Q2TAC2 916 aa19.21■□□□□ 0.67
NCK1-201ENST00000288986 LAMB2P55268 1798 aa19.21■□□□□ 0.67
NCK1-201ENST00000288986 PPEF1O14829 653 aaPredicted RBP19.2■□□□□ 0.66
NCK1-201ENST00000288986 CENPQQ7L2Z9 268 aaPredicted RBP19.2■□□□□ 0.66
NCK1-201ENST00000288986 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
NCK1-201ENST00000288986 TMX4Q9H1E5 349 aaPredicted RBP19.2■□□□□ 0.66
NCK1-201ENST00000288986 DLEC1Q9Y238 1755 aa19.2■□□□□ 0.66
NCK1-201ENST00000288986 ANKRD18BA2A2Z9 1011 aa19.19■□□□□ 0.66
NCK1-201ENST00000288986 RABL6Q3YEC7 729 aaPredicted RBP19.19■□□□□ 0.66
NCK1-201ENST00000288986 ANKRD18AQ8IVF6 992 aa19.19■□□□□ 0.66
NCK1-201ENST00000288986 ANKRD44Q8N8A2 993 aa19.19■□□□□ 0.66
NCK1-201ENST00000288986 ZBTB40Q9NUA8 1239 aa19.19■□□□□ 0.66
NCK1-201ENST00000288986 OLFM4Q6UX06 510 aa19.19■□□□□ 0.66
NCK1-201ENST00000288986 BRCA1P38398 1863 aaKnown RBP19.18■□□□□ 0.66
NCK1-201ENST00000288986 GRIN3BO60391 1043 aa19.18■□□□□ 0.66
NCK1-201ENST00000288986 CHMP4BQ9H444 224 aaKnown RBP19.18■□□□□ 0.66
NCK1-201ENST00000288986 C1orf115Q9H7X2 142 aa19.18■□□□□ 0.66
NCK1-201ENST00000288986 PCDHB15Q9Y5E8 787 aa19.18■□□□□ 0.66
NCK1-201ENST00000288986 SLX4Q8IY92 1834 aa19.18■□□□□ 0.66
NCK1-201ENST00000288986 MYH3P11055 1940 aa19.18■□□□□ 0.66
NCK1-201ENST00000288986 IGHMBP2P38935 993 aaKnown RBP19.17■□□□□ 0.66
NCK1-201ENST00000288986 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
NCK1-201ENST00000288986 ARHGAP27Q6ZUM4 889 aa19.17■□□□□ 0.66
NCK1-201ENST00000288986 C7orf43Q8WVR3 580 aa19.17■□□□□ 0.66
NCK1-201ENST00000288986 RTL9Q8NET4 1388 aa19.17■□□□□ 0.66
NCK1-201ENST00000288986 MPHOSPH8Q99549 860 aa19.17■□□□□ 0.66
NCK1-201ENST00000288986 ATP6V0A2Q9Y487 856 aa19.17■□□□□ 0.66
NCK1-201ENST00000288986 SOGA3Q5TF21 947 aa19.16■□□□□ 0.66
NCK1-201ENST00000288986 TMC4Q7Z404 712 aa19.16■□□□□ 0.66
NCK1-201ENST00000288986 TAF1P21675 1872 aa19.16■□□□□ 0.66
NCK1-201ENST00000288986 CACNA1SQ13698 1873 aa19.16■□□□□ 0.66
NCK1-201ENST00000288986 SLC51AQ86UW1 340 aa19.15■□□□□ 0.66
NCK1-201ENST00000288986 SP8Q8IXZ3 490 aa19.15■□□□□ 0.66
NCK1-201ENST00000288986 ZNF594Q96JF6 807 aaPredicted RBP19.15■□□□□ 0.66
NCK1-201ENST00000288986 IGHDP01880 384 aa19.15■□□□□ 0.66
NCK1-201ENST00000288986 CCDC93Q567U6 631 aa19.15■□□□□ 0.66
NCK1-201ENST00000288986 BSDC1Q9NW68 430 aaPredicted RBP19.15■□□□□ 0.66
NCK1-201ENST00000288986 SRGAP3O43295 1099 aa19.14■□□□□ 0.65
NCK1-201ENST00000288986 CC2D2BQ6DHV5 1058 aa19.14■□□□□ 0.65
NCK1-201ENST00000288986 LDHAL6AQ6ZMR3 332 aa19.13■□□□□ 0.65
NCK1-201ENST00000288986 RTKN2Q8IZC4 609 aa19.13■□□□□ 0.65
NCK1-201ENST00000288986 KLHDC4Q8TBB5 520 aa19.13■□□□□ 0.65
NCK1-201ENST00000288986 NSFL1CQ9UNZ2 370 aaKnown RBP19.13■□□□□ 0.65
NCK1-201ENST00000288986 COL4A1P02462 1669 aa19.13■□□□□ 0.65
NCK1-201ENST00000288986 CNNM1Q9NRU3 951 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms