RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 CCDC85AQ96PX6 553 aaPredicted RBP26.13■■□□□ 1.77
RAB28-201ENST00000288723 PSMD1Q99460 953 aa26.13■■□□□ 1.77
RAB28-201ENST00000288723 CACNA1FO60840 1977 aa26.12■■□□□ 1.77
RAB28-201ENST00000288723 IARSP41252 1262 aaKnown RBP26.11■■□□□ 1.77
RAB28-201ENST00000288723 TRMT2AQ8IZ69 625 aaKnown RBP26.11■■□□□ 1.77
RAB28-201ENST00000288723 TMX4Q9H1E5 349 aaPredicted RBP26.11■■□□□ 1.77
RAB28-201ENST00000288723 PDE8AO60658 829 aa26.11■■□□□ 1.77
RAB28-201ENST00000288723 SP8Q8IXZ3 490 aa26.11■■□□□ 1.77
RAB28-201ENST00000288723 DICER1Q9UPY3 1922 aaKnown RBP26.11■■□□□ 1.77
RAB28-201ENST00000288723 COL4A1P02462 1669 aa26.11■■□□□ 1.77
RAB28-201ENST00000288723 GCKRQ14397 625 aa26.1■■□□□ 1.77
RAB28-201ENST00000288723 UBE3BQ7Z3V4 1068 aa26.1■■□□□ 1.77
RAB28-201ENST00000288723 LINS1Q8NG48 757 aa26.1■■□□□ 1.77
RAB28-201ENST00000288723 SEC31BQ9NQW1 1179 aa26.1■■□□□ 1.77
RAB28-201ENST00000288723 HSP90B1P14625 803 aaKnown RBP26.09■■□□□ 1.77
RAB28-201ENST00000288723 DPY19L2Q6NUT2 758 aa26.09■■□□□ 1.77
RAB28-201ENST00000288723 CDHR2Q9BYE9 1310 aa26.09■■□□□ 1.77
RAB28-201ENST00000288723 H7C1W4 665 aa26.09■■□□□ 1.77
RAB28-201ENST00000288723 MRPL50Q8N5N7 158 aaKnown RBP26.09■■□□□ 1.77
RAB28-201ENST00000288723 BCL2L13Q9BXK5 485 aa26.09■■□□□ 1.77
RAB28-201ENST00000288723 GRIPAP1Q4V328 841 aa26.08■■□□□ 1.77
RAB28-201ENST00000288723 SSH1Q8WYL5 1049 aa26.08■■□□□ 1.77
RAB28-201ENST00000288723 DDNO94850 711 aaPredicted RBP26.07■■□□□ 1.76
RAB28-201ENST00000288723 BEND3Q5T5X7 828 aa26.07■■□□□ 1.76
RAB28-201ENST00000288723 CCDC152Q4G0S7 254 aa26.07■■□□□ 1.76
RAB28-201ENST00000288723 DPP8Q6V1X1 898 aaPredicted RBP26.07■■□□□ 1.76
RAB28-201ENST00000288723 RPS8P62241 208 aaKnown RBP26.06■■□□□ 1.76
RAB28-201ENST00000288723 SLC4A10Q6U841 1118 aa26.06■■□□□ 1.76
RAB28-201ENST00000288723 MPNDQ8N594 471 aa26.06■■□□□ 1.76
RAB28-201ENST00000288723 CTSWP56202 376 aa26.05■■□□□ 1.76
RAB28-201ENST00000288723 COL4A5P29400 1685 aa26.05■■□□□ 1.76
RAB28-201ENST00000288723 HNRNPUQ00839 825 aaKnown RBP eCLIP26.04■■□□□ 1.76
RAB28-201ENST00000288723 LARGE2Q8N3Y3 721 aa26.04■■□□□ 1.76
RAB28-201ENST00000288723 ZNF541Q9H0D2 1346 aa26.04■■□□□ 1.76
RAB28-201ENST00000288723 CASP7P55210 303 aa26.04■■□□□ 1.76
RAB28-201ENST00000288723 TMC4Q7Z404 712 aa26.04■■□□□ 1.76
RAB28-201ENST00000288723 TTLL11Q8NHH1 800 aa26.04■■□□□ 1.76
RAB28-201ENST00000288723 JDP2Q8WYK2 163 aa26.04■■□□□ 1.76
RAB28-201ENST00000288723 POTECB2RU33 542 aa26.03■■□□□ 1.76
RAB28-201ENST00000288723 AOC3Q16853 763 aa26.03■■□□□ 1.76
RAB28-201ENST00000288723 PPIP5K2O43314 1243 aa26.02■■□□□ 1.76
RAB28-201ENST00000288723 C16orf71Q8IYS4 520 aaPredicted RBP26.02■■□□□ 1.76
RAB28-201ENST00000288723 RTFDC1Q9BY42 306 aaPredicted RBP26.02■■□□□ 1.76
RAB28-201ENST00000288723 NSFL1CQ9UNZ2 370 aaKnown RBP26.02■■□□□ 1.76
RAB28-201ENST00000288723 FZD9O00144 591 aa26.02■■□□□ 1.76
RAB28-201ENST00000288723 TOMM70O94826 608 aa26.02■■□□□ 1.76
RAB28-201ENST00000288723 VEGFAP15692 232 aaPredicted RBP26.02■■□□□ 1.76
RAB28-201ENST00000288723 GREM2Q9H772 168 aa26.02■■□□□ 1.76
RAB28-201ENST00000288723 GPSM2P81274 684 aa26■■□□□ 1.75
RAB28-201ENST00000288723 SUPT20HQ8NEM7 779 aa26■■□□□ 1.75
RAB28-201ENST00000288723 SMC4Q9NTJ3 1288 aa26■■□□□ 1.75
RAB28-201ENST00000288723 ALDH1L2Q3SY69 923 aa25.99■■□□□ 1.75
RAB28-201ENST00000288723 SRCIN1Q9C0H9 1055 aa25.99■■□□□ 1.75
RAB28-201ENST00000288723 ANKRD18AQ8IVF6 992 aa25.98■■□□□ 1.75
RAB28-201ENST00000288723 PLA2G12BQ9BX93 195 aa25.98■■□□□ 1.75
RAB28-201ENST00000288723 LRRC37AA6NMS7 1700 aa25.98■■□□□ 1.75
RAB28-201ENST00000288723 NIM1KQ8IY84 436 aa25.98■■□□□ 1.75
RAB28-201ENST00000288723 POLLQ9UGP5 575 aa25.97■■□□□ 1.75
RAB28-201ENST00000288723 DUOX1Q9NRD9 1551 aa25.96■■□□□ 1.75
RAB28-201ENST00000288723 WDR90Q96KV7 1748 aa25.96■■□□□ 1.75
RAB28-201ENST00000288723 PTPRCP08575 1304 aa25.96■■□□□ 1.75
RAB28-201ENST00000288723 C6orf229H3BNL8 230 aa25.96■■□□□ 1.75
RAB28-201ENST00000288723 C9orf78Q9NZ63 289 aaPredicted RBP25.96■■□□□ 1.75
RAB28-201ENST00000288723 GRM8O00222 908 aa25.95■■□□□ 1.75
RAB28-201ENST00000288723 ALDH1L1O75891 902 aa25.95■■□□□ 1.75
RAB28-201ENST00000288723 EIF6P56537 245 aaKnown RBP25.95■■□□□ 1.75
RAB28-201ENST00000288723 KIAA2012Q0VF49 1180 aa25.95■■□□□ 1.75
RAB28-201ENST00000288723 GPR101Q96P66 508 aaPredicted RBP25.95■■□□□ 1.75
RAB28-201ENST00000288723 CDC5LQ99459 802 aaKnown RBP25.95■■□□□ 1.75
RAB28-201ENST00000288723 VPS33BQ9H267 617 aa25.95■■□□□ 1.75
RAB28-201ENST00000288723 GJA3Q9Y6H8 435 aa25.95■■□□□ 1.75
RAB28-201ENST00000288723 CT47B1P0C2W7 299 aaPredicted RBP25.95■■□□□ 1.74
RAB28-201ENST00000288723 FAM161AQ3B820 660 aa25.95■■□□□ 1.74
RAB28-201ENST00000288723 RBM46Q8TBY0 533 aaKnown RBP25.95■■□□□ 1.74
RAB28-201ENST00000288723 MYH3P11055 1940 aa25.95■■□□□ 1.74
RAB28-201ENST00000288723 RIMBP2O15034 1052 aa25.94■■□□□ 1.74
RAB28-201ENST00000288723 CSF1RP07333 972 aa25.94■■□□□ 1.74
RAB28-201ENST00000288723 ANKIB1Q9P2G1 1089 aa25.94■■□□□ 1.74
RAB28-201ENST00000288723 ITGA6P23229 1130 aa25.93■■□□□ 1.74
RAB28-201ENST00000288723 FOXO4P98177 505 aa25.93■■□□□ 1.74
RAB28-201ENST00000288723 WASHC4Q2M389 1173 aa25.93■■□□□ 1.74
RAB28-201ENST00000288723 EPHA10Q5JZY3 1008 aa25.93■■□□□ 1.74
RAB28-201ENST00000288723 GPC2Q8N158 579 aa25.93■■□□□ 1.74
RAB28-201ENST00000288723 TBC1D16Q8TBP0 767 aa25.93■■□□□ 1.74
RAB28-201ENST00000288723 L3MBTL3Q96JM7 780 aaPredicted RBP25.93■■□□□ 1.74
RAB28-201ENST00000288723 RTL9Q8NET4 1388 aa25.93■■□□□ 1.74
RAB28-201ENST00000288723 RARSP54136 660 aaKnown RBP25.92■■□□□ 1.74
RAB28-201ENST00000288723 ZNRF3Q9ULT6 936 aa25.92■■□□□ 1.74
RAB28-201ENST00000288723 NOB1Q9ULX3 412 aaKnown RBP25.92■■□□□ 1.74
RAB28-201ENST00000288723 PODXL2Q9NZ53 605 aa25.91■■□□□ 1.74
RAB28-201ENST00000288723 NBPF7P0C2Y1 421 aaPredicted RBP25.91■■□□□ 1.74
RAB28-201ENST00000288723 BSDC1Q9NW68 430 aaPredicted RBP25.91■■□□□ 1.74
RAB28-201ENST00000288723 CHMP3Q9Y3E7 222 aa25.91■■□□□ 1.74
RAB28-201ENST00000288723 UFL1O94874 794 aa25.9■■□□□ 1.74
RAB28-201ENST00000288723 POTEIP0CG38 1075 aa25.9■■□□□ 1.74
RAB28-201ENST00000288723 POTEJP0CG39 1038 aa25.9■■□□□ 1.74
RAB28-201ENST00000288723 LMBR1LQ6UX01 489 aa25.9■■□□□ 1.74
RAB28-201ENST00000288723 IQCA1LA6NCM1 817 aa25.89■■□□□ 1.74
RAB28-201ENST00000288723 WTIPA6NIX2 430 aaPredicted RBP25.89■■□□□ 1.74
RAB28-201ENST00000288723 CXCL9Q07325 125 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms