RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
BRAF-201ENST00000288602 EYA2O00167 538 aa23.19■■□□□ 1.3
BRAF-201ENST00000288602 SLFNL1Q499Z3 407 aa23.19■■□□□ 1.3
BRAF-201ENST00000288602 CCDC129Q6ZRS4 1044 aa23.19■■□□□ 1.3
BRAF-201ENST00000288602 ACSBG1Q96GR2 724 aa23.19■■□□□ 1.3
BRAF-201ENST00000288602 ANO8Q9HCE9 1232 aaPredicted RBP23.19■■□□□ 1.3
BRAF-201ENST00000288602 DDX49Q9Y6V7 483 aaKnown RBP23.19■■□□□ 1.3
BRAF-201ENST00000288602 LARGE1O95461 756 aa23.18■■□□□ 1.3
BRAF-201ENST00000288602 IL15P40933 162 aaPredicted RBP23.18■■□□□ 1.3
BRAF-201ENST00000288602 HAUS7Q99871 368 aa23.18■■□□□ 1.3
BRAF-201ENST00000288602 MAP3K15Q6ZN16 1313 aa23.18■■□□□ 1.3
BRAF-201ENST00000288602 PIP4K2BP78356 416 aa23.18■■□□□ 1.3
BRAF-201ENST00000288602 CCDC57Q2TAC2 916 aa23.18■■□□□ 1.3
BRAF-201ENST00000288602 SKOR2Q2VWA4 1001 aaPredicted RBP23.18■■□□□ 1.3
BRAF-201ENST00000288602 FOXD4L6Q3SYB3 417 aaPredicted RBP23.18■■□□□ 1.3
BRAF-201ENST00000288602 FOXD4L3Q6VB84 417 aaPredicted RBP23.18■■□□□ 1.3
BRAF-201ENST00000288602 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.17■■□□□ 1.3
BRAF-201ENST00000288602 MED23Q9ULK4 1368 aa23.17■■□□□ 1.3
BRAF-201ENST00000288602 SLC27A2O14975 620 aa23.17■■□□□ 1.3
BRAF-201ENST00000288602 RTN4Q9NQC3 1192 aaKnown RBP23.17■■□□□ 1.3
BRAF-201ENST00000288602 PDRG1Q9NUG6 133 aa23.17■■□□□ 1.3
BRAF-201ENST00000288602 TBC1D2BQ9UPU7 963 aa23.17■■□□□ 1.3
BRAF-201ENST00000288602 FSD2A1L4K1 749 aa23.17■■□□□ 1.3
BRAF-201ENST00000288602 ZKSCAN1P17029 563 aaPredicted RBP23.17■■□□□ 1.3
BRAF-201ENST00000288602 GIGYF2Q6Y7W6 1299 aaKnown RBP23.17■■□□□ 1.3
BRAF-201ENST00000288602 LMBRD1Q9NUN5 540 aa23.17■■□□□ 1.3
BRAF-201ENST00000288602 LIMCH1Q9UPQ0 1083 aa23.17■■□□□ 1.3
BRAF-201ENST00000288602 COL22A1Q8NFW1 1626 aaPredicted RBP23.16■■□□□ 1.3
BRAF-201ENST00000288602 PRPF40AO75400 957 aaKnown RBP23.16■■□□□ 1.3
BRAF-201ENST00000288602 KCNB2Q92953 911 aa23.16■■□□□ 1.3
BRAF-201ENST00000288602 ZSWIM6Q9HCJ5 1215 aa23.16■■□□□ 1.3
BRAF-201ENST00000288602 SNRKQ9NRH2 765 aa23.16■■□□□ 1.3
BRAF-201ENST00000288602 A0A1B0GUL7 405 aa23.16■■□□□ 1.3
BRAF-201ENST00000288602 GOLIM4O00461 696 aa23.16■■□□□ 1.3
BRAF-201ENST00000288602 BRD1O95696 1058 aa23.16■■□□□ 1.3
BRAF-201ENST00000288602 TCEANC2Q96MN5 208 aa23.16■■□□□ 1.3
BRAF-201ENST00000288602 CYP46A1Q9Y6A2 500 aa23.16■■□□□ 1.3
BRAF-201ENST00000288602 XRCC6P12956 609 aaKnown RBP eCLIP23.15■■□□□ 1.31e-5■■■□□ 14.9
BRAF-201ENST00000288602 NCLP19338 710 aaKnown RBP23.15■■□□□ 1.3
BRAF-201ENST00000288602 PTMSP20962 102 aa23.15■■□□□ 1.3
BRAF-201ENST00000288602 ZBTB38Q8NAP3 1195 aaPredicted RBP23.15■■□□□ 1.3
BRAF-201ENST00000288602 TAF5LO75529 589 aa23.15■■□□□ 1.3
BRAF-201ENST00000288602 PCCAP05165 728 aaPredicted RBP23.15■■□□□ 1.3
BRAF-201ENST00000288602 TRIM28Q13263 835 aaKnown RBP23.15■■□□□ 1.3
BRAF-201ENST00000288602 DDB1Q16531 1140 aa23.15■■□□□ 1.3
BRAF-201ENST00000288602 L1TD1Q5T7N2 865 aaKnown RBP23.14■■□□□ 1.29
BRAF-201ENST00000288602 SPATA31A1Q5TZJ5 1347 aa23.14■■□□□ 1.29
BRAF-201ENST00000288602 ZNF609O15014 1411 aa23.14■■□□□ 1.29
BRAF-201ENST00000288602 NLRP10Q86W26 655 aa23.14■■□□□ 1.29
BRAF-201ENST00000288602 GAS2L3Q86XJ1 694 aa23.13■■□□□ 1.29
BRAF-201ENST00000288602 PANK2Q9BZ23 570 aa23.13■■□□□ 1.29
BRAF-201ENST00000288602 PLCH1Q4KWH8 1693 aa23.13■■□□□ 1.29
BRAF-201ENST00000288602 VPS53Q5VIR6 699 aa23.13■■□□□ 1.29
BRAF-201ENST00000288602 PAG1Q9NWQ8 432 aa23.13■■□□□ 1.29
BRAF-201ENST00000288602 LTBP4Q8N2S1 1624 aa23.12■■□□□ 1.29
BRAF-201ENST00000288602 KLHL40Q2TBA0 621 aa23.12■■□□□ 1.29
BRAF-201ENST00000288602 TAF7LQ5H9L4 462 aa23.12■■□□□ 1.29
BRAF-201ENST00000288602 CCDC83Q8IWF9 413 aa23.12■■□□□ 1.29
BRAF-201ENST00000288602 TM6SF1Q9BZW5 370 aa23.12■■□□□ 1.29
BRAF-201ENST00000288602 CEP126Q9P2H0 1117 aa23.12■■□□□ 1.29
BRAF-201ENST00000288602 CIAO1O76071 339 aa23.11■■□□□ 1.29
BRAF-201ENST00000288602 KBTBD3Q8NAB2 608 aa23.11■■□□□ 1.29
BRAF-201ENST00000288602 PHLPP1O60346 1717 aa23.11■■□□□ 1.29
BRAF-201ENST00000288602 DOT1LQ8TEK3 1739 aa23.11■■□□□ 1.29
BRAF-201ENST00000288602 ADORA1P30542 326 aa23.11■■□□□ 1.29
BRAF-201ENST00000288602 GPR108Q9NPR9 543 aa23.11■■□□□ 1.29
BRAF-201ENST00000288602 IFIT5Q13325 482 aaKnown RBP23.1■■□□□ 1.29
BRAF-201ENST00000288602 DZIP3Q86Y13 1208 aaKnown RBP23.1■■□□□ 1.29
BRAF-201ENST00000288602 MARCH10Q8NA82 808 aaPredicted RBP23.1■■□□□ 1.29
BRAF-201ENST00000288602 IFIT1P09914 478 aaKnown RBP23.1■■□□□ 1.29
BRAF-201ENST00000288602 GREM2Q9H772 168 aa23.1■■□□□ 1.29
BRAF-201ENST00000288602 CSF1RP07333 972 aa23.09■■□□□ 1.29
BRAF-201ENST00000288602 ME3Q16798 604 aa23.09■■□□□ 1.29
BRAF-201ENST00000288602 NECAB1Q8N987 351 aa23.09■■□□□ 1.29
BRAF-201ENST00000288602 TRMT112Q9UI30 125 aaKnown RBP23.09■■□□□ 1.29
BRAF-201ENST00000288602 LRP6O75581 1613 aa23.09■■□□□ 1.29
BRAF-201ENST00000288602 RPAP1Q9BWH6 1393 aaPredicted RBP23.09■■□□□ 1.29
BRAF-201ENST00000288602 WNK3Q9BYP7 1800 aa23.09■■□□□ 1.29
BRAF-201ENST00000288602 MCMDC2Q4G0Z9 681 aa23.09■■□□□ 1.29
BRAF-201ENST00000288602 RNF20Q5VTR2 975 aa23.09■■□□□ 1.29
BRAF-201ENST00000288602 CAVIN1Q6NZI2 390 aaKnown RBP23.09■■□□□ 1.29
BRAF-201ENST00000288602 GPT2Q8TD30 523 aa23.08■■□□□ 1.29
BRAF-201ENST00000288602 TPCN1Q9ULQ1 816 aa23.08■■□□□ 1.29
BRAF-201ENST00000288602 FKBP4Q02790 459 aaKnown RBP eCLIP23.08■■□□□ 1.29
BRAF-201ENST00000288602 TTLL11Q8NHH1 800 aa23.08■■□□□ 1.29
BRAF-201ENST00000288602 PLA2G12BQ9BX93 195 aa23.08■■□□□ 1.29
BRAF-201ENST00000288602 NSFL1CQ9UNZ2 370 aaKnown RBP23.08■■□□□ 1.29
BRAF-201ENST00000288602 FAM177BA6PVY3 158 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 IRS4O14654 1257 aaPredicted RBP23.07■■□□□ 1.28
BRAF-201ENST00000288602 ITGA6P23229 1130 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 ATP6V1AP38606 617 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 ST3GAL1Q11201 340 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 JCADQ9P266 1359 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 UBN2Q6ZU65 1347 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 GORABQ5T7V8 394 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 BLOC1S2Q6QNY1 142 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 XAGE2Q96GT9 111 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 GDPD2Q9HCC8 539 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 SMC3Q9UQE7 1217 aa23.07■■□□□ 1.28
BRAF-201ENST00000288602 PSMA5P28066 241 aa23.06■■□□□ 1.28
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