RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 A0A0G2JS52 829 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 GPTP24298 496 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 HSPA4P34932 840 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 DBNDD2Q9BQY9 259 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 RIC1Q4ADV7 1423 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 ST18O60284 1047 aa12.34□□□□□ -0.43
C9orf43-201ENST00000288462 CWC27Q6UX04 472 aaKnown RBP12.34□□□□□ -0.43
C9orf43-201ENST00000288462 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
C9orf43-201ENST00000288462 ARXQ96QS3 562 aa12.34□□□□□ -0.43
C9orf43-201ENST00000288462 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
C9orf43-201ENST00000288462 ATRNO75882 1429 aa12.34□□□□□ -0.43
C9orf43-201ENST00000288462 TAF1LQ8IZX4 1826 aa12.34□□□□□ -0.43
C9orf43-201ENST00000288462 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
C9orf43-201ENST00000288462 LRRC24Q50LG9 513 aa12.34□□□□□ -0.43
C9orf43-201ENST00000288462 ZNF594Q96JF6 807 aaPredicted RBP12.34□□□□□ -0.43
C9orf43-201ENST00000288462 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
C9orf43-201ENST00000288462 CASZ1Q86V15 1759 aa12.33□□□□□ -0.43
C9orf43-201ENST00000288462 MED23Q9ULK4 1368 aa12.33□□□□□ -0.43
C9orf43-201ENST00000288462 CAMTA2O94983 1202 aa12.33□□□□□ -0.44
C9orf43-201ENST00000288462 CTSWP56202 376 aa12.33□□□□□ -0.44
C9orf43-201ENST00000288462 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
C9orf43-201ENST00000288462 SYNE4Q8N205 404 aa12.32□□□□□ -0.44
C9orf43-201ENST00000288462 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
C9orf43-201ENST00000288462 HAUS7Q99871 368 aa12.32□□□□□ -0.44
C9orf43-201ENST00000288462 PUS3Q9BZE2 481 aaKnown RBP12.32□□□□□ -0.44
C9orf43-201ENST00000288462 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
C9orf43-201ENST00000288462 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
C9orf43-201ENST00000288462 FRAT2O75474 233 aaPredicted RBP12.32□□□□□ -0.44
C9orf43-201ENST00000288462 IFIT5Q13325 482 aaKnown RBP12.32□□□□□ -0.44
C9orf43-201ENST00000288462 AK7Q96M32 723 aa12.32□□□□□ -0.44
C9orf43-201ENST00000288462 FSD1Q9BTV5 496 aa12.32□□□□□ -0.44
C9orf43-201ENST00000288462 TRMT112Q9UI30 125 aaKnown RBP12.32□□□□□ -0.44
C9orf43-201ENST00000288462 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
C9orf43-201ENST00000288462 PDE8AO60658 829 aa12.31□□□□□ -0.44
C9orf43-201ENST00000288462 HSPA1LP34931 641 aa12.31□□□□□ -0.44
C9orf43-201ENST00000288462 NMIQ13287 307 aaPredicted RBP12.31□□□□□ -0.44
C9orf43-201ENST00000288462 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
C9orf43-201ENST00000288462 LINC00116Q8NCU8 138 aa12.31□□□□□ -0.44
C9orf43-201ENST00000288462 CCDC171Q6TFL3 1326 aa12.31□□□□□ -0.44
C9orf43-201ENST00000288462 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
C9orf43-201ENST00000288462 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 A0A0D9SFI3 127 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 A0A1B0GUL7 405 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 RGL2O15211 777 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 MCM2P49736 904 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 PARP10Q53GL7 1025 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 TICAM2Q86XR7 235 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.3□□□□□ -0.44
C9orf43-201ENST00000288462 KCNB2Q92953 911 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 GREM2Q9H772 168 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 CEP126Q9P2H0 1117 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 AFF2P51816 1311 aa12.3□□□□□ -0.44
C9orf43-201ENST00000288462 HSP90AA1P07900 732 aaKnown RBP12.29□□□□□ -0.44
C9orf43-201ENST00000288462 ITGA6P23229 1130 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 NEK4P51957 841 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 PTH1RQ03431 593 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 TAF7LQ5H9L4 462 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 EDC3Q96F86 508 aaKnown RBP12.29□□□□□ -0.44
C9orf43-201ENST00000288462 GJD4Q96KN9 370 aaPredicted RBP12.29□□□□□ -0.44
C9orf43-201ENST00000288462 SH3TC1Q8TE82 1336 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 MYH7P12883 1935 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 RTL9Q8NET4 1388 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 C4AP0C0L4 1744 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 C4BP0C0L5 1744 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 ANKRD18BA2A2Z9 1011 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 TIMM10P62072 90 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
C9orf43-201ENST00000288462 SUSD4Q5VX71 490 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 PTF1AQ7RTS3 328 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 CCDC85AQ96PX6 553 aaPredicted RBP12.29□□□□□ -0.44
C9orf43-201ENST00000288462 AKAP2Q9Y2D5 859 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 RIPOR2Q9Y4F9 1068 aa12.29□□□□□ -0.44
C9orf43-201ENST00000288462 ONECUT3O60422 494 aaPredicted RBP12.28□□□□□ -0.44
C9orf43-201ENST00000288462 NTSR2O95665 410 aa12.28□□□□□ -0.44
C9orf43-201ENST00000288462 KBTBD3Q8NAB2 608 aa12.28□□□□□ -0.44
C9orf43-201ENST00000288462 NEUROD6Q96NK8 337 aa12.28□□□□□ -0.44
C9orf43-201ENST00000288462 DNAJC2Q99543 621 aaKnown RBP12.28□□□□□ -0.44
C9orf43-201ENST00000288462 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
C9orf43-201ENST00000288462 AKAP11Q9UKA4 1901 aa12.28□□□□□ -0.44
C9orf43-201ENST00000288462 RAB3GAP1Q15042 981 aa12.28□□□□□ -0.44
C9orf43-201ENST00000288462 RASEFQ8IZ41 740 aa12.28□□□□□ -0.44
C9orf43-201ENST00000288462 MAP4K1Q92918 833 aa12.28□□□□□ -0.44
C9orf43-201ENST00000288462 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
C9orf43-201ENST00000288462 NECTIN1Q15223 517 aa12.27□□□□□ -0.45
C9orf43-201ENST00000288462 RC3H1Q5TC82 1133 aaKnown RBP12.27□□□□□ -0.45
C9orf43-201ENST00000288462 CLEC4GQ6UXB4 293 aa12.27□□□□□ -0.45
C9orf43-201ENST00000288462 VGLL2Q8N8G2 317 aa12.27□□□□□ -0.45
C9orf43-201ENST00000288462 NDUFB9Q9Y6M9 179 aa12.27□□□□□ -0.45
C9orf43-201ENST00000288462 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
C9orf43-201ENST00000288462 TMX3Q96JJ7 454 aa12.26□□□□□ -0.45
C9orf43-201ENST00000288462 TTC14Q96N46 770 aa12.26□□□□□ -0.45
C9orf43-201ENST00000288462 UPF3BQ9BZI7 483 aaKnown RBP12.26□□□□□ -0.45
C9orf43-201ENST00000288462 FOXD4L1Q9NU39 408 aa12.26□□□□□ -0.45
C9orf43-201ENST00000288462 PAG1Q9NWQ8 432 aa12.26□□□□□ -0.45
C9orf43-201ENST00000288462 RBM8AQ9Y5S9 174 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms