RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 NOP58Q9Y2X3 529 aaKnown RBP14.06□□□□□ -0.16
XRCC4-201ENST00000282268 UBR3Q6ZT12 1888 aa14.06□□□□□ -0.16
XRCC4-201ENST00000282268 IFIT5Q13325 482 aaKnown RBP14.05□□□□□ -0.16
XRCC4-201ENST00000282268 MSL1Q68DK7 614 aa14.05□□□□□ -0.16
XRCC4-201ENST00000282268 KIF1BPQ96EK5 621 aa14.05□□□□□ -0.16
XRCC4-201ENST00000282268 CSF1RP07333 972 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 ITGA6P23229 1130 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 TSHZ3Q63HK5 1081 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 PUS3Q9BZE2 481 aaKnown RBP14.04□□□□□ -0.16
XRCC4-201ENST00000282268 NYXQ9GZU5 481 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 ANKRD18BA2A2Z9 1011 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 RGL2O15211 777 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 LRRC24Q50LG9 513 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 ERC1Q8IUD2 1116 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 PLEKHM2Q8IWE5 1019 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 COPRSQ9NQ92 184 aa14.04□□□□□ -0.16
XRCC4-201ENST00000282268 PNPLA7Q6ZV29 1317 aa14.03□□□□□ -0.16
XRCC4-201ENST00000282268 SASH1O94885 1247 aa14.03□□□□□ -0.16
XRCC4-201ENST00000282268 TFCP2Q12800 502 aa14.03□□□□□ -0.16
XRCC4-201ENST00000282268 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
XRCC4-201ENST00000282268 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.03□□□□□ -0.16
XRCC4-201ENST00000282268 CARMIL3Q8ND23 1372 aa14.02□□□□□ -0.16
XRCC4-201ENST00000282268 ABCC12Q96J65 1359 aa14.02□□□□□ -0.16
XRCC4-201ENST00000282268 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.16
XRCC4-201ENST00000282268 FLAD1Q8NFF5 587 aa14.02□□□□□ -0.16
XRCC4-201ENST00000282268 SEC31BQ9NQW1 1179 aa14.02□□□□□ -0.16
XRCC4-201ENST00000282268 SERPINB2P05120 415 aa14.01□□□□□ -0.17
XRCC4-201ENST00000282268 CCDC152Q4G0S7 254 aa14.01□□□□□ -0.17
XRCC4-201ENST00000282268 AACSQ86V21 672 aa14.01□□□□□ -0.17
XRCC4-201ENST00000282268 CLASRPQ8N2M8 674 aaKnown RBP14.01□□□□□ -0.17
XRCC4-201ENST00000282268 CNBD1Q8NA66 436 aa14.01□□□□□ -0.17
XRCC4-201ENST00000282268 CCDC8Q9H0W5 538 aaPredicted RBP14.01□□□□□ -0.17
XRCC4-201ENST00000282268 RGPD3A6NKT7 1758 aaPredicted RBP14.01□□□□□ -0.17
XRCC4-201ENST00000282268 RGPD4Q7Z3J3 1758 aa14.01□□□□□ -0.17
XRCC4-201ENST00000282268 EYA2O00167 538 aa14.01□□□□□ -0.17
XRCC4-201ENST00000282268 IFIT2P09913 472 aaKnown RBP14.01□□□□□ -0.17
XRCC4-201ENST00000282268 TM4SF1P30408 202 aa14.01□□□□□ -0.17
XRCC4-201ENST00000282268 DDR1Q08345 913 aa14.01□□□□□ -0.17
XRCC4-201ENST00000282268 CNNM1Q9NRU3 951 aa14.01□□□□□ -0.17
XRCC4-201ENST00000282268 TUBGCP6Q96RT7 1819 aa14□□□□□ -0.17
XRCC4-201ENST00000282268 MX1P20591 662 aa14□□□□□ -0.17
XRCC4-201ENST00000282268 LDHAL6AQ6ZMR3 332 aa14□□□□□ -0.17
XRCC4-201ENST00000282268 ATG9AQ7Z3C6 839 aa14□□□□□ -0.17
XRCC4-201ENST00000282268 NLRP3Q96P20 1036 aa14□□□□□ -0.17
XRCC4-201ENST00000282268 IL15P40933 162 aaPredicted RBP13.99□□□□□ -0.17
XRCC4-201ENST00000282268 PDE1AP54750 535 aa13.99□□□□□ -0.17
XRCC4-201ENST00000282268 PRR5LQ6MZQ0 368 aa13.99□□□□□ -0.17
XRCC4-201ENST00000282268 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
XRCC4-201ENST00000282268 DDX60Q8IY21 1712 aaKnown RBP13.99□□□□□ -0.17
XRCC4-201ENST00000282268 POLRMTO00411 1230 aaKnown RBP13.98□□□□□ -0.17
XRCC4-201ENST00000282268 ST5P78524 1137 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 METTL24Q5JXM2 366 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 SLC10A5Q5PT55 438 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 CCDC125Q86Z20 511 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 EAF2Q96CJ1 260 aaPredicted RBP13.98□□□□□ -0.17
XRCC4-201ENST00000282268 NEUROD6Q96NK8 337 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 MPHOSPH8Q99549 860 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 PDGFDQ9GZP0 370 aaPredicted RBP13.98□□□□□ -0.17
XRCC4-201ENST00000282268 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 TLR7Q9NYK1 1049 aaKnown RBP13.98□□□□□ -0.17
XRCC4-201ENST00000282268 CIAO1O76071 339 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 MAP4K4O95819 1239 aaPredicted RBP13.98□□□□□ -0.17
XRCC4-201ENST00000282268 MMP10P09238 476 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 IGHMBP2P38935 993 aaKnown RBP13.98□□□□□ -0.17
XRCC4-201ENST00000282268 COL24A1Q17RW2 1714 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 TTC22Q5TAA0 569 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 HELBQ8NG08 1087 aaPredicted RBP13.98□□□□□ -0.17
XRCC4-201ENST00000282268 CEP126Q9P2H0 1117 aa13.98□□□□□ -0.17
XRCC4-201ENST00000282268 GSPT1P15170 499 aaKnown RBP13.97□□□□□ -0.17
XRCC4-201ENST00000282268 TNNI3KQ59H18 835 aa13.97□□□□□ -0.17
XRCC4-201ENST00000282268 PARP3Q9Y6F1 533 aa13.97□□□□□ -0.17
XRCC4-201ENST00000282268 FPGT-TNNI3KV9GXZ4 949 aa13.97□□□□□ -0.17
XRCC4-201ENST00000282268 TIMM10P62072 90 aa13.96□□□□□ -0.17
XRCC4-201ENST00000282268 SF3B3Q15393 1217 aaKnown RBP13.96□□□□□ -0.17
XRCC4-201ENST00000282268 SALL3Q9BXA9 1300 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 TRIM6-TRIM34B2RNG4 842 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 C8orf34Q49A92 452 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 ANKRD18AQ8IVF6 992 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 UPF1Q92900 1129 aaKnown RBP eCLIP13.95□□□□□ -0.18
XRCC4-201ENST00000282268 GPATCH3Q96I76 525 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 CDC5LQ99459 802 aaKnown RBP13.95□□□□□ -0.18
XRCC4-201ENST00000282268 RIPOR2Q9Y4F9 1068 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 MYH3P11055 1940 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 DDX46Q7L014 1031 aaKnown RBP13.95□□□□□ -0.18
XRCC4-201ENST00000282268 CELF1Q92879 486 aaKnown RBP13.95□□□□□ -0.18
XRCC4-201ENST00000282268 RILPL2Q969X0 211 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 DBNDD2Q9BQY9 259 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 BACH2Q9BYV9 841 aa13.95□□□□□ -0.18
XRCC4-201ENST00000282268 LAMB2P55268 1798 aa13.94□□□□□ -0.18
XRCC4-201ENST00000282268 TAF5LO75529 589 aa13.94□□□□□ -0.18
XRCC4-201ENST00000282268 SDSP20132 328 aa13.94□□□□□ -0.18
XRCC4-201ENST00000282268 BMP2KLQ5H9B9 411 aa13.94□□□□□ -0.18
XRCC4-201ENST00000282268 RPGRQ92834 1020 aaKnown RBP13.94□□□□□ -0.18
XRCC4-201ENST00000282268 ECHDC1Q9NTX5 307 aa13.94□□□□□ -0.18
XRCC4-201ENST00000282268 STAP2Q9UGK3 403 aa13.94□□□□□ -0.18
XRCC4-201ENST00000282268 OSBPL3Q9H4L5 887 aa13.93□□□□□ -0.18
XRCC4-201ENST00000282268 DBNLQ9UJU6 430 aaKnown RBP13.93□□□□□ -0.18
XRCC4-201ENST00000282268 FBXO3Q9UK99 471 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms