RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 RTF1Q92541 710 aaKnown RBP13.51□□□□□ -0.25
SCLT1-201ENST00000281142 C16orf45Q96MC5 204 aaPredicted RBP13.51□□□□□ -0.25
SCLT1-201ENST00000281142 TNS2Q63HR2 1409 aa13.51□□□□□ -0.25
SCLT1-201ENST00000281142 SCN11AQ9UI33 1791 aa13.51□□□□□ -0.25
SCLT1-201ENST00000281142 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 PHKG2P15735 406 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 HYPKQ9NX55 129 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 CCDC186Q7Z3E2 898 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 PPP1R42Q7Z4L9 355 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 TTC6Q86TZ1 520 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 CDCA7Q9BWT1 371 aaPredicted RBP13.5□□□□□ -0.25
SCLT1-201ENST00000281142 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.5□□□□□ -0.25
SCLT1-201ENST00000281142 NCBP1Q09161 790 aaKnown RBP13.5□□□□□ -0.25
SCLT1-201ENST00000281142 DIAPH3Q9NSV4 1193 aa13.5□□□□□ -0.25
SCLT1-201ENST00000281142 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-201ENST00000281142 VGLL3A8MV65 326 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 ZBTB22O15209 634 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 CHAF1AQ13111 956 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-201ENST00000281142 DDB1Q16531 1140 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 C1orf141Q5JVX7 400 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 MPRIPQ6WCQ1 1025 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 JAKMIP1Q96N16 626 aaKnown RBP13.49□□□□□ -0.25
SCLT1-201ENST00000281142 PHAXQ9H814 394 aaKnown RBP13.49□□□□□ -0.25
SCLT1-201ENST00000281142 LGR6Q9HBX8 967 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 MRVI1Q9Y6F6 885 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 EXOC5O00471 708 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 CTIFO43310 598 aaKnown RBP13.49□□□□□ -0.25
SCLT1-201ENST00000281142 UBTFL1P0CB47 393 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-201ENST00000281142 PRPF40BQ6NWY9 871 aaKnown RBP13.49□□□□□ -0.25
SCLT1-201ENST00000281142 IFNL2Q8IZJ0 200 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 RHPN1Q8TCX5 695 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 TOGARAM1Q9Y4F4 1720 aa13.49□□□□□ -0.25
SCLT1-201ENST00000281142 KDM6AO15550 1401 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-201ENST00000281142 ONECUT3O60422 494 aaPredicted RBP13.48□□□□□ -0.25
SCLT1-201ENST00000281142 IL17REQ8NFR9 667 aa13.48□□□□□ -0.25
SCLT1-201ENST00000281142 A0A0G2JS52 829 aa13.48□□□□□ -0.25
SCLT1-201ENST00000281142 CCDC192P0DO97 292 aa13.48□□□□□ -0.25
SCLT1-201ENST00000281142 PDIA4P13667 645 aaKnown RBP13.48□□□□□ -0.25
SCLT1-201ENST00000281142 ME3Q16798 604 aa13.48□□□□□ -0.25
SCLT1-201ENST00000281142 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
SCLT1-201ENST00000281142 CDC37L1Q7L3B6 337 aa13.48□□□□□ -0.25
SCLT1-201ENST00000281142 TCEANC2Q96MN5 208 aa13.48□□□□□ -0.25
SCLT1-201ENST00000281142 TYRO3Q06418 890 aa13.48□□□□□ -0.25
SCLT1-201ENST00000281142 CGNQ9P2M7 1197 aaKnown RBP13.48□□□□□ -0.25
SCLT1-201ENST00000281142 SSH3Q8TE77 659 aa13.47□□□□□ -0.25
SCLT1-201ENST00000281142 PDRG1Q9NUG6 133 aa13.47□□□□□ -0.25
SCLT1-201ENST00000281142 SIPA1L3O60292 1781 aaPredicted RBP13.47□□□□□ -0.25
SCLT1-201ENST00000281142 RBM6P78332 1123 aaKnown RBP13.47□□□□□ -0.25
SCLT1-201ENST00000281142 TFIP11Q9UBB9 837 aaKnown RBP13.47□□□□□ -0.25
SCLT1-201ENST00000281142 CEMIPQ8WUJ3 1361 aa13.46□□□□□ -0.25
SCLT1-201ENST00000281142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
SCLT1-201ENST00000281142 SRGAP3O43295 1099 aa13.46□□□□□ -0.25
SCLT1-201ENST00000281142 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
SCLT1-201ENST00000281142 ANO6Q4KMQ2 910 aa13.46□□□□□ -0.25
SCLT1-201ENST00000281142 DRC7Q8IY82 874 aa13.46□□□□□ -0.25
SCLT1-201ENST00000281142 MARCH10Q8NA82 808 aaPredicted RBP13.46□□□□□ -0.25
SCLT1-201ENST00000281142 FAM200AQ8TCP9 573 aa13.46□□□□□ -0.25
SCLT1-201ENST00000281142 CBX8Q9HC52 389 aa13.46□□□□□ -0.25
SCLT1-201ENST00000281142 ATP6V1DQ9Y5K8 247 aa13.46□□□□□ -0.25
SCLT1-201ENST00000281142 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
SCLT1-201ENST00000281142 NBPF7P0C2Y1 421 aaPredicted RBP13.46□□□□□ -0.25
SCLT1-201ENST00000281142 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.25
SCLT1-201ENST00000281142 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.25
SCLT1-201ENST00000281142 AOX1Q06278 1338 aa13.46□□□□□ -0.26
SCLT1-201ENST00000281142 IPO4Q8TEX9 1081 aaKnown RBP13.45□□□□□ -0.26
SCLT1-201ENST00000281142 NUP62CLQ9H1M0 184 aa13.45□□□□□ -0.26
SCLT1-201ENST00000281142 DOT1LQ8TEK3 1739 aa13.45□□□□□ -0.26
SCLT1-201ENST00000281142 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-201ENST00000281142 MAP3K11Q16584 847 aa13.45□□□□□ -0.26
SCLT1-201ENST00000281142 CNTROBQ8N137 903 aa13.45□□□□□ -0.26
SCLT1-201ENST00000281142 DACT1Q9NYF0 836 aa13.45□□□□□ -0.26
SCLT1-201ENST00000281142 TPCN1Q9ULQ1 816 aa13.45□□□□□ -0.26
SCLT1-201ENST00000281142 ITGB4P16144 1822 aa13.45□□□□□ -0.26
SCLT1-201ENST00000281142 GOLGA6L6A8MZA4 724 aa13.45□□□□□ -0.26
SCLT1-201ENST00000281142 TNNT1P13805 278 aa13.44□□□□□ -0.26
SCLT1-201ENST00000281142 ARID5BQ14865 1188 aa13.44□□□□□ -0.26
SCLT1-201ENST00000281142 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
SCLT1-201ENST00000281142 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
SCLT1-201ENST00000281142 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
SCLT1-201ENST00000281142 TAF6LQ9Y6J9 622 aa13.44□□□□□ -0.26
SCLT1-201ENST00000281142 RXRBP28702 533 aa13.44□□□□□ -0.26
SCLT1-201ENST00000281142 LARP1BQ659C4 914 aaKnown RBP13.44□□□□□ -0.26
SCLT1-201ENST00000281142 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
SCLT1-201ENST00000281142 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCLT1-201ENST00000281142 V9GYY5 206 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-201ENST00000281142 ANXA1P04083 346 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 POLA2Q14181 598 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 FAM182BQ5T319 152 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 TAF3Q5VWG9 929 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 ZSCAN25Q6NSZ9 544 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 CACTINQ8WUQ7 758 aaKnown RBP13.43□□□□□ -0.26
SCLT1-201ENST00000281142 ZNF592Q92610 1267 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 CTNNA3Q9UI47 895 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 MRC1P22897 1456 aa13.43□□□□□ -0.26
SCLT1-201ENST00000281142 TPM3P06753 285 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 602.2 ms