RNA–Protein interactions for RNA: ENST00000280780.6

FAM53B-201, Transcript of family with sequence similarity 53 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM53B, Length 1,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-201ENST00000280780 DDX60Q8IY21 1712 aaKnown RBP28.06■■■□□ 2.08
FAM53B-201ENST00000280780 LAMB2P55268 1798 aa28.05■■■□□ 2.08
FAM53B-201ENST00000280780 GRIN3BO60391 1043 aa28.05■■■□□ 2.08
FAM53B-201ENST00000280780 UBE3BQ7Z3V4 1068 aa28.05■■■□□ 2.08
FAM53B-201ENST00000280780 MASTLQ96GX5 879 aa28.04■■■□□ 2.08
FAM53B-201ENST00000280780 SLX4Q8IY92 1834 aa28.04■■■□□ 2.08
FAM53B-201ENST00000280780 ARFGEF1Q9Y6D6 1849 aa28.04■■■□□ 2.08
FAM53B-201ENST00000280780 CACNA1SQ13698 1873 aa28.04■■■□□ 2.08
FAM53B-201ENST00000280780 GNAI3P08754 354 aa28.03■■■□□ 2.08
FAM53B-201ENST00000280780 CRY2Q49AN0 593 aa28.03■■■□□ 2.08
FAM53B-201ENST00000280780 KAZALD1Q96I82 304 aa28.03■■■□□ 2.08
FAM53B-201ENST00000280780 PDZRN3Q9UPQ7 1066 aa28.03■■■□□ 2.08
FAM53B-201ENST00000280780 SH3TC1Q8TE82 1336 aa28.03■■■□□ 2.08
FAM53B-201ENST00000280780 PCCAP05165 728 aaPredicted RBP28.03■■■□□ 2.08
FAM53B-201ENST00000280780 UBTFL1P0CB47 393 aaPredicted RBP28.03■■■□□ 2.08
FAM53B-201ENST00000280780 STYK1Q6J9G0 422 aa28.03■■■□□ 2.08
FAM53B-201ENST00000280780 ZBTB38Q8NAP3 1195 aaPredicted RBP28.03■■■□□ 2.08
FAM53B-201ENST00000280780 MYH3P11055 1940 aa28.02■■■□□ 2.08
FAM53B-201ENST00000280780 ZNF219Q9P2Y4 722 aaPredicted RBP28.02■■■□□ 2.08
FAM53B-201ENST00000280780 LRRFIP2Q9Y608 721 aaKnown RBP28.02■■■□□ 2.08
FAM53B-201ENST00000280780 NPR1P16066 1061 aa28.01■■■□□ 2.07
FAM53B-201ENST00000280780 SUCLG2Q96I99 432 aa28.01■■■□□ 2.07
FAM53B-201ENST00000280780 RIC1Q4ADV7 1423 aa28.01■■■□□ 2.07
FAM53B-201ENST00000280780 SLC51AQ86UW1 340 aa28■■■□□ 2.07
FAM53B-201ENST00000280780 CHMP4BQ9H444 224 aaKnown RBP28■■■□□ 2.07
FAM53B-201ENST00000280780 PCDHB15Q9Y5E8 787 aa28■■■□□ 2.07
FAM53B-201ENST00000280780 ARHGAP27Q6ZUM4 889 aa27.99■■■□□ 2.07
FAM53B-201ENST00000280780 NLRP3Q96P20 1036 aa27.99■■■□□ 2.07
FAM53B-201ENST00000280780 C21orf2O43822 256 aa27.99■■■□□ 2.07
FAM53B-201ENST00000280780 GNAI2P04899 355 aa27.99■■■□□ 2.07
FAM53B-201ENST00000280780 EPHA10Q5JZY3 1008 aa27.99■■■□□ 2.07
FAM53B-201ENST00000280780 PRPF40BQ6NWY9 871 aaKnown RBP27.99■■■□□ 2.07
FAM53B-201ENST00000280780 CHD4Q14839 1912 aa27.98■■■□□ 2.07
FAM53B-201ENST00000280780 CDHR2Q9BYE9 1310 aa27.98■■■□□ 2.07
FAM53B-201ENST00000280780 OLFM4Q6UX06 510 aa27.98■■■□□ 2.07
FAM53B-201ENST00000280780 CNKSR1Q969H4 720 aa27.98■■■□□ 2.07
FAM53B-201ENST00000280780 IRS4O14654 1257 aaPredicted RBP27.97■■■□□ 2.07
FAM53B-201ENST00000280780 AAMPQ13685 434 aa27.97■■■□□ 2.07
FAM53B-201ENST00000280780 C7orf43Q8WVR3 580 aa27.97■■■□□ 2.07
FAM53B-201ENST00000280780 TAF1P21675 1872 aa27.96■■■□□ 2.07
FAM53B-201ENST00000280780 HOXA10P31260 410 aaPredicted RBP27.96■■■□□ 2.07
FAM53B-201ENST00000280780 BICC1Q9H694 974 aaKnown RBP27.95■■■□□ 2.07
FAM53B-201ENST00000280780 PRELPP51888 382 aa27.94■■■□□ 2.06
FAM53B-201ENST00000280780 FOXO4P98177 505 aa27.94■■■□□ 2.06
FAM53B-201ENST00000280780 ANKRD44Q8N8A2 993 aa27.94■■■□□ 2.06
FAM53B-201ENST00000280780 CEP85Q6P2H3 762 aa27.94■■■□□ 2.06
FAM53B-201ENST00000280780 SIRT2Q8IXJ6 389 aa27.94■■■□□ 2.06
FAM53B-201ENST00000280780 RPGRQ92834 1020 aaKnown RBP27.94■■■□□ 2.06
FAM53B-201ENST00000280780 PLA2G12BQ9BX93 195 aa27.93■■■□□ 2.06
FAM53B-201ENST00000280780 COL4A1P02462 1669 aa27.93■■■□□ 2.06
FAM53B-201ENST00000280780 ALDH1B1P30837 517 aa27.92■■■□□ 2.06
FAM53B-201ENST00000280780 YY1P25490 414 aa27.91■■■□□ 2.06
FAM53B-201ENST00000280780 RASSF7Q02833 373 aa27.91■■■□□ 2.06
FAM53B-201ENST00000280780 RBM17Q96I25 401 aaKnown RBP27.91■■■□□ 2.06
FAM53B-201ENST00000280780 CRAMP1Q96RY5 1269 aa27.91■■■□□ 2.06
FAM53B-201ENST00000280780 NFKBIEO00221 500 aa27.9■■■□□ 2.06
FAM53B-201ENST00000280780 SF3B3Q15393 1217 aaKnown RBP27.9■■■□□ 2.06
FAM53B-201ENST00000280780 RABL6Q3YEC7 729 aaPredicted RBP27.9■■■□□ 2.06
FAM53B-201ENST00000280780 PNMA6EA0A0J9YXQ4 647 aa27.89■■■□□ 2.05
FAM53B-201ENST00000280780 SBF1O95248 1867 aa27.88■■■□□ 2.05
FAM53B-201ENST00000280780 MTX1Q13505 466 aa27.88■■■□□ 2.05
FAM53B-201ENST00000280780 CCDC85AQ96PX6 553 aaPredicted RBP27.88■■■□□ 2.05
FAM53B-201ENST00000280780 HDAC5Q9UQL6 1122 aa27.88■■■□□ 2.05
FAM53B-201ENST00000280780 FER1L6Q2WGJ9 1857 aa27.88■■■□□ 2.05
FAM53B-201ENST00000280780 PDE8AO60658 829 aa27.87■■■□□ 2.05
FAM53B-201ENST00000280780 LMBR1LQ6UX01 489 aa27.87■■■□□ 2.05
FAM53B-201ENST00000280780 RPAP2Q8IXW5 612 aaPredicted RBP27.87■■■□□ 2.05
FAM53B-201ENST00000280780 CTSWP56202 376 aa27.86■■■□□ 2.05
FAM53B-201ENST00000280780 ATP8B2P98198 1209 aa27.86■■■□□ 2.05
FAM53B-201ENST00000280780 B4GALNT3Q6L9W6 998 aa27.86■■■□□ 2.05
FAM53B-201ENST00000280780 SEC31BQ9NQW1 1179 aa27.86■■■□□ 2.05
FAM53B-201ENST00000280780 CSF1RP07333 972 aa27.86■■■□□ 2.05
FAM53B-201ENST00000280780 TTLL11Q8NHH1 800 aa27.86■■■□□ 2.05
FAM53B-201ENST00000280780 DDX46Q7L014 1031 aaKnown RBP27.85■■■□□ 2.05
FAM53B-201ENST00000280780 CELF1Q92879 486 aaKnown RBP27.85■■■□□ 2.05
FAM53B-201ENST00000280780 CCDC136Q96JN2 1154 aa27.85■■■□□ 2.05
FAM53B-201ENST00000280780 CCDC88AQ3V6T2 1871 aa27.84■■■□□ 2.05
FAM53B-201ENST00000280780 IGHDP01880 384 aa27.84■■■□□ 2.05
FAM53B-201ENST00000280780 SNED1Q8TER0 1413 aa27.84■■■□□ 2.05
FAM53B-201ENST00000280780 PPEF1O14829 653 aaPredicted RBP27.83■■■□□ 2.05
FAM53B-201ENST00000280780 SRGAP3O43295 1099 aa27.83■■■□□ 2.05
FAM53B-201ENST00000280780 POLA2Q14181 598 aa27.83■■■□□ 2.05
FAM53B-201ENST00000280780 SSH3Q8TE77 659 aa27.83■■■□□ 2.05
FAM53B-201ENST00000280780 GRAPQ13588 217 aa27.82■■■□□ 2.04
FAM53B-201ENST00000280780 FAM161AQ3B820 660 aa27.82■■■□□ 2.04
FAM53B-201ENST00000280780 C9orf131Q5VYM1 1079 aa27.82■■■□□ 2.04
FAM53B-201ENST00000280780 GRAPLQ8TC17 118 aaPredicted RBP27.82■■■□□ 2.04
FAM53B-201ENST00000280780 HDAC1Q13547 482 aaPredicted RBP27.82■■■□□ 2.04
FAM53B-201ENST00000280780 GREM2Q9H772 168 aa27.82■■■□□ 2.04
FAM53B-201ENST00000280780 SPEF2Q9C093 1822 aa27.81■■■□□ 2.04
FAM53B-201ENST00000280780 RFX5P48382 616 aaPredicted RBP27.81■■■□□ 2.04
FAM53B-201ENST00000280780 HSP90B1P14625 803 aaKnown RBP27.8■■■□□ 2.04
FAM53B-201ENST00000280780 CCDC93Q567U6 631 aa27.8■■■□□ 2.04
FAM53B-201ENST00000280780 CHMP3Q9Y3E7 222 aa27.8■■■□□ 2.04
FAM53B-201ENST00000280780 BBOX1O75936 387 aa27.79■■■□□ 2.04
FAM53B-201ENST00000280780 ATP6V0A2Q9Y487 856 aa27.79■■■□□ 2.04
FAM53B-201ENST00000280780 RNF181Q9P0P0 153 aa27.78■■■□□ 2.04
FAM53B-201ENST00000280780 RTL9Q8NET4 1388 aa27.78■■■□□ 2.04
FAM53B-201ENST00000280780 CCDC152Q4G0S7 254 aa27.77■■■□□ 2.04
FAM53B-201ENST00000280780 KLHDC4Q8TBB5 520 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms