RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 CYP27B1O15528 508 aa13.6□□□□□ -0.23
SIRPB1-202ENST00000279477 RFX5P48382 616 aaPredicted RBP13.6□□□□□ -0.23
SIRPB1-202ENST00000279477 TLR7Q9NYK1 1049 aaKnown RBP13.6□□□□□ -0.23
SIRPB1-202ENST00000279477 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
SIRPB1-202ENST00000279477 TJP1Q07157 1748 aa13.6□□□□□ -0.23
SIRPB1-202ENST00000279477 RPS6KB1P23443 525 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 PTPN12Q05209 780 aaKnown RBP13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 CHAMP1Q96JM3 812 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 MTMR6Q9Y217 621 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 CNPY2Q9Y2B0 182 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 PALLDQ8WX93 1383 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 A0A087WZG4 1122 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 LARGE1O95461 756 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 UBE3BQ7Z3V4 1068 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 MTERF4Q7Z6M4 381 aaKnown RBP13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 GPR108Q9NPR9 543 aa13.59□□□□□ -0.23
SIRPB1-202ENST00000279477 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 ZNF500O60304 480 aaPredicted RBP13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 ME3Q16798 604 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 USP16Q9Y5T5 823 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 ELP1O95163 1332 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 SH3TC1Q8TE82 1336 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 GADD45BO75293 160 aaPredicted RBP13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 KRT85P78386 507 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 EPHA10Q5JZY3 1008 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 HAUS7Q99871 368 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 GDPD2Q9HCC8 539 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 DBNLQ9UJU6 430 aaKnown RBP13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 ZKSCAN5Q9Y2L8 839 aa13.58□□□□□ -0.24
SIRPB1-202ENST00000279477 FIBPO43427 364 aa13.57□□□□□ -0.24
SIRPB1-202ENST00000279477 CPA1P15085 419 aa13.57□□□□□ -0.24
SIRPB1-202ENST00000279477 CHMP4CQ96CF2 233 aa13.57□□□□□ -0.24
SIRPB1-202ENST00000279477 ABCA3Q99758 1704 aa13.57□□□□□ -0.24
SIRPB1-202ENST00000279477 VPS37CA5D8V6 355 aaPredicted RBP13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 TAF5LO75529 589 aa13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 CASP7P55210 303 aa13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 TFCP2Q12800 502 aa13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 CWC25Q9NXE8 425 aaPredicted RBP13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 KCPQ6ZWJ8 1503 aa13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 OFD1O75665 1012 aa13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 LARP1BQ659C4 914 aaKnown RBP13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 KLHDC4Q8TBB5 520 aa13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 ATG3Q9NT62 314 aa13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 XIRP1Q702N8 1843 aaKnown RBP13.56□□□□□ -0.24
SIRPB1-202ENST00000279477 H7C1W4 665 aa13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 CHRNA2Q15822 529 aa13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 LRRFIP1Q32MZ4 808 aaKnown RBP13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 FOXD4L6Q3SYB3 417 aaPredicted RBP13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 MCMDC2Q4G0Z9 681 aa13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 FOXD4L3Q6VB84 417 aaPredicted RBP13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 SCAND2PQ9GZW5 306 aaPredicted RBP13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 IL15P40933 162 aaPredicted RBP13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 KBTBD3Q8NAB2 608 aa13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 CCDC191Q8NCU4 936 aa13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 ZCRB1Q8TBF4 217 aaKnown RBP13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 KIF3AQ9Y496 699 aa13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 ZNF609O15014 1411 aa13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 SHANK3Q9BYB0 1731 aa13.55□□□□□ -0.24
SIRPB1-202ENST00000279477 COL5A2P05997 1499 aaPredicted RBP13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 PTMAP06454 111 aaKnown RBP13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 ST3GAL1Q11201 340 aa13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 ZNF589Q86UQ0 364 aaPredicted RBP13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 RNF214Q8ND24 703 aa13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 NEK1Q96PY6 1258 aa13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 HELLSQ9NRZ9 838 aa13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 CIAO1O76071 339 aa13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 DNM1Q05193 864 aaKnown RBP13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
SIRPB1-202ENST00000279477 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
SIRPB1-202ENST00000279477 TOB2Q14106 344 aaPredicted RBP13.53□□□□□ -0.24
SIRPB1-202ENST00000279477 LMBR1LQ6UX01 489 aa13.53□□□□□ -0.24
SIRPB1-202ENST00000279477 CABLES1Q8TDN4 633 aa13.53□□□□□ -0.24
SIRPB1-202ENST00000279477 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.53□□□□□ -0.24
SIRPB1-202ENST00000279477 DNAJC2Q99543 621 aaKnown RBP13.53□□□□□ -0.24
SIRPB1-202ENST00000279477 DBNDD2Q9BQY9 259 aa13.53□□□□□ -0.24
SIRPB1-202ENST00000279477 PRDM11Q9NQV5 511 aa13.53□□□□□ -0.24
SIRPB1-202ENST00000279477 ATP5J2-PTCD1G3V325 749 aa13.52□□□□□ -0.24
SIRPB1-202ENST00000279477 PTCD1O75127 700 aaKnown RBP13.52□□□□□ -0.24
SIRPB1-202ENST00000279477 NECAB1Q8N987 351 aa13.52□□□□□ -0.24
SIRPB1-202ENST00000279477 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.24
SIRPB1-202ENST00000279477 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.24
SIRPB1-202ENST00000279477 LAMA4Q16363 1823 aa13.52□□□□□ -0.25
SIRPB1-202ENST00000279477 FOXO4P98177 505 aa13.52□□□□□ -0.25
SIRPB1-202ENST00000279477 TOM1L2Q6ZVM7 507 aa13.52□□□□□ -0.25
SIRPB1-202ENST00000279477 DDX17Q92841 729 aaKnown RBP13.52□□□□□ -0.25
SIRPB1-202ENST00000279477 GTF3C6Q969F1 213 aa13.52□□□□□ -0.25
SIRPB1-202ENST00000279477 MYH15Q9Y2K3 1946 aa13.52□□□□□ -0.25
SIRPB1-202ENST00000279477 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
SIRPB1-202ENST00000279477 CCDC192P0DO97 292 aa13.51□□□□□ -0.25
SIRPB1-202ENST00000279477 PAG1Q9NWQ8 432 aa13.51□□□□□ -0.25
SIRPB1-202ENST00000279477 CHMP3Q9Y3E7 222 aa13.51□□□□□ -0.25
SIRPB1-202ENST00000279477 IL2RBP14784 551 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms