RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 FKBP4Q02790 459 aaKnown RBP eCLIP3.77□□□□□ -1.81
HERC4-201ENST00000277817 ENOX2Q16206 610 aaKnown RBP3.77□□□□□ -1.81
HERC4-201ENST00000277817 TSGA10IPQ3SY00 556 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 HSP90AB4PQ58FF6 505 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 SULF1Q8IWU6 871 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 HELQQ8TDG4 1101 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 APBA2Q99767 749 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 GPSM3Q9Y4H4 160 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 ATF4P18848 351 aaPredicted RBP3.77□□□□□ -1.81
HERC4-201ENST00000277817 ANP32AP39687 249 aaKnown RBP3.77□□□□□ -1.81
HERC4-201ENST00000277817 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.77□□□□□ -1.81
HERC4-201ENST00000277817 GPR182O15218 404 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 ATP2B1P20020 1258 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 DAPK1P53355 1430 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 XPCQ01831 940 aaPredicted RBP3.77□□□□□ -1.81
HERC4-201ENST00000277817 NCOA4Q13772 614 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 UBE4AQ14139 1066 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 GTF3C2Q8WUA4 911 aaPredicted RBP3.77□□□□□ -1.81
HERC4-201ENST00000277817 UPF1Q92900 1129 aaKnown RBP eCLIP3.77□□□□□ -1.81
HERC4-201ENST00000277817 RNF34Q969K3 372 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 ENAMQ9NRM1 1142 aa3.77□□□□□ -1.81
HERC4-201ENST00000277817 RRBP1Q9P2E9 1410 aaKnown RBP3.76□□□□□ -1.81
HERC4-201ENST00000277817 A6NJY4 79 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 H3BRB1 525 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 COL9A1P20849 921 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 GYS2P54840 703 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 CCDC136Q96JN2 1154 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 TUT1Q9H6E5 874 aaKnown RBP3.76□□□□□ -1.81
HERC4-201ENST00000277817 USP31Q70CQ4 1352 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 CHD4Q14839 1912 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 ZBBXA8MT70 800 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 EPHA4P54764 986 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 RHBDL3P58872 404 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 GUCA2AQ02747 115 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 ZNF211Q13398 564 aaPredicted RBP3.76□□□□□ -1.81
HERC4-201ENST00000277817 CCSAPQ6IQ19 270 aaPredicted RBP3.76□□□□□ -1.81
HERC4-201ENST00000277817 KANSL2Q9H9L4 492 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 TNRQ92752 1358 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 COL5A3P25940 1745 aaPredicted RBP3.76□□□□□ -1.81
HERC4-201ENST00000277817 TOGARAM1Q9Y4F4 1720 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 MAP3K7O43318 606 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 CREB3O43889 395 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 MAPK1P28482 360 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 MAP3K10Q02779 954 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 KRT26Q7Z3Y9 468 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 PCGF5Q86SE9 256 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 GJD3Q8N144 294 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 SUPT16HQ9Y5B9 1047 aaKnown RBP3.76□□□□□ -1.81
HERC4-201ENST00000277817 RGPD5Q99666 1765 aa3.76□□□□□ -1.81
HERC4-201ENST00000277817 COL6A1P12109 1028 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 FGD1P98174 961 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 RALBP1Q15311 655 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 MAP7D1Q3KQU3 841 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 FAM26DQ5JW98 314 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 ASTLQ6HA08 431 aaPredicted RBP3.75□□□□□ -1.81
HERC4-201ENST00000277817 CHRDL2Q6WN34 429 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 CHST12Q9NRB3 414 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 GNL3LQ9NVN8 582 aaKnown RBP3.75□□□□□ -1.81
HERC4-201ENST00000277817 HFM1A2PYH4 1435 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 AATKQ6ZMQ8 1374 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 FKBP5Q13451 457 aaPredicted RBP3.75□□□□□ -1.81
HERC4-201ENST00000277817 RGL3Q3MIN7 710 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 TSHZ1Q6ZSZ6 1077 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 PLPP7Q8NBV4 271 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 TMEM260Q9NX78 707 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 SEPT3Q9UH03 358 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 MAP2P11137 1827 aaKnown RBP3.75□□□□□ -1.81
HERC4-201ENST00000277817 TMEM2Q9UHN6 1383 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 hCG_2014768A0A024R1R8 64 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 NFE2Q16621 373 aaPredicted RBP3.75□□□□□ -1.81
HERC4-201ENST00000277817 SVIPQ8NHG7 77 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 ZCRB1Q8TBF4 217 aaKnown RBP3.75□□□□□ -1.81
HERC4-201ENST00000277817 SCYL1Q96KG9 808 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 KCNH8Q96L42 1107 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 SETDB2Q96T68 719 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 PRR12Q9ULL5 1215 aa3.75□□□□□ -1.81
HERC4-201ENST00000277817 DNAJB2P25686 324 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 C11orf96Q7Z7L8 435 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 ADAM33Q9BZ11 813 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 LAS1LQ9Y4W2 734 aaKnown RBP3.74□□□□□ -1.81
HERC4-201ENST00000277817 CFAP69A5D8W1 941 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 POTEMA6NI47 508 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 FDX1P10109 184 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 POTEGQ6S5H5 508 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 RAVER1Q8IY67 606 aaKnown RBP3.74□□□□□ -1.81
HERC4-201ENST00000277817 IER2Q9BTL4 223 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 ARFGEF1Q9Y6D6 1849 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 EHHADHQ08426 723 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 VPS72Q15906 364 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 FRMD6Q96NE9 622 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 CCDC85AQ96PX6 553 aaPredicted RBP3.74□□□□□ -1.81
HERC4-201ENST00000277817 CASS4Q9NQ75 786 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 CCNB3Q8WWL7 1395 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 BDNFP23560 247 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 SETQ01105 290 aaPredicted RBP3.74□□□□□ -1.81
HERC4-201ENST00000277817 KCNH2Q12809 1159 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 ZSCAN29Q8IWY8 852 aaPredicted RBP3.74□□□□□ -1.81
HERC4-201ENST00000277817 OGFOD1Q8N543 542 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 ANKRD24Q8TF21 1146 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 IL17RAQ96F46 866 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms