RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 JDP2Q8WYK2 163 aa23.27■■□□□ 1.32
CACNA1B-201ENST00000277549 FAM83GA6ND36 823 aa23.27■■□□□ 1.32
CACNA1B-201ENST00000277549 FAM13AO94988 1023 aa23.27■■□□□ 1.32
CACNA1B-201ENST00000277549 AMOTQ4VCS5 1084 aa23.27■■□□□ 1.32
CACNA1B-201ENST00000277549 LRRC45Q96CN5 670 aa23.27■■□□□ 1.32
CACNA1B-201ENST00000277549 HYPKQ9NX55 129 aa23.27■■□□□ 1.32
CACNA1B-201ENST00000277549 CTR9Q6PD62 1173 aa23.27■■□□□ 1.32
CACNA1B-201ENST00000277549 EAPPQ56P03 285 aaPredicted RBP23.26■■□□□ 1.31
CACNA1B-201ENST00000277549 HAUS7Q99871 368 aa23.26■■□□□ 1.31
CACNA1B-201ENST00000277549 STAT6P42226 847 aa23.26■■□□□ 1.31
CACNA1B-201ENST00000277549 NAPAP54920 295 aa23.26■■□□□ 1.31
CACNA1B-201ENST00000277549 MIGA1Q8NAN2 632 aa23.26■■□□□ 1.31
CACNA1B-201ENST00000277549 BEGAINQ9BUH8 593 aa23.26■■□□□ 1.31
CACNA1B-201ENST00000277549 CFAP58Q5T655 872 aa23.26■■□□□ 1.31
CACNA1B-201ENST00000277549 CUX1P39880 1505 aa23.26■■□□□ 1.31
CACNA1B-201ENST00000277549 HMGB2P26583 209 aaKnown RBP23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 RNF34Q969K3 372 aa23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 C16orf45Q96MC5 204 aaPredicted RBP23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 MYCP01106 439 aaPredicted RBP23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 PPP2R5CQ13362 524 aa23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 PLCB3Q01970 1234 aa23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 TMCO4Q5TGY1 634 aa23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 SYNJ2O15056 1496 aa23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 RAB3GAP1Q15042 981 aa23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 BACH1O14867 736 aa23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 MAP9Q49MG5 647 aa23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 HELBQ8NG08 1087 aaPredicted RBP23.25■■□□□ 1.31
CACNA1B-201ENST00000277549 KIAA0753Q2KHM9 967 aa23.24■■□□□ 1.31
CACNA1B-201ENST00000277549 CCDC117Q8IWD4 279 aaPredicted RBP23.24■■□□□ 1.31
CACNA1B-201ENST00000277549 IQCGQ9H095 443 aaKnown RBP23.24■■□□□ 1.31
CACNA1B-201ENST00000277549 RPAP2Q8IXW5 612 aaPredicted RBP23.24■■□□□ 1.31
CACNA1B-201ENST00000277549 WTAPQ15007 396 aa23.24■■□□□ 1.31
CACNA1B-201ENST00000277549 ORC3Q9UBD5 711 aaPredicted RBP23.24■■□□□ 1.31
CACNA1B-201ENST00000277549 CCDC61Q9Y6R9 512 aa23.24■■□□□ 1.31
CACNA1B-201ENST00000277549 NCOA2Q15596 1464 aa23.23■■□□□ 1.31
CACNA1B-201ENST00000277549 PDCL2Q8N4E4 241 aa23.23■■□□□ 1.31
CACNA1B-201ENST00000277549 MTERF4Q7Z6M4 381 aaKnown RBP23.23■■□□□ 1.31
CACNA1B-201ENST00000277549 CCDC65Q8IXS2 484 aa23.23■■□□□ 1.31
CACNA1B-201ENST00000277549 SORBS3O60504 671 aa23.23■■□□□ 1.31
CACNA1B-201ENST00000277549 EIF6P56537 245 aaKnown RBP23.23■■□□□ 1.31
CACNA1B-201ENST00000277549 NBPF8Q3BBV2 869 aa23.22■■□□□ 1.31
CACNA1B-201ENST00000277549 NBPF14Q5TI25 921 aa23.22■■□□□ 1.31
CACNA1B-201ENST00000277549 CLSTN2Q9H4D0 955 aa23.22■■□□□ 1.31
CACNA1B-201ENST00000277549 CHST3Q7LGC8 479 aa23.22■■□□□ 1.31
CACNA1B-201ENST00000277549 NECAB1Q8N987 351 aa23.22■■□□□ 1.31
CACNA1B-201ENST00000277549 CHMP2AO43633 222 aa23.22■■□□□ 1.31
CACNA1B-201ENST00000277549 GABPAQ06546 454 aa23.22■■□□□ 1.31
CACNA1B-201ENST00000277549 TCEANC2Q96MN5 208 aa23.22■■□□□ 1.31
CACNA1B-201ENST00000277549 ERMNQ8TAM6 284 aa23.22■■□□□ 1.31
CACNA1B-201ENST00000277549 CCDC160A6NGH7 325 aa23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 IFNL2Q8IZJ0 200 aa23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 NSFL1CQ9UNZ2 370 aaKnown RBP23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 IRX5P78411 483 aaPredicted RBP23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 ZNF804AQ7Z570 1209 aa23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 PPP2R5DQ14738 602 aa23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 NCOA7Q8NI08 942 aa23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 MRRFQ96E11 262 aaKnown RBP23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 SLC52A1Q9NWF4 448 aa23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 RBM27Q9P2N5 1060 aaKnown RBP23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 CCDC183Q5T5S1 534 aa23.21■■□□□ 1.31
CACNA1B-201ENST00000277549 HMGB1P09429 215 aaKnown RBP23.2■■□□□ 1.31
CACNA1B-201ENST00000277549 KRT9P35527 623 aa23.2■■□□□ 1.31
CACNA1B-201ENST00000277549 USP25Q9UHP3 1055 aa23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 TPD52P55327 224 aaPredicted RBP23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 SPATA24Q86W54 205 aa23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 IPO4Q8TEX9 1081 aaKnown RBP23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 FAM114A1Q8IWE2 563 aa23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 IMPG2Q9BZV3 1241 aa23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 TNNI2P48788 182 aa23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 MAEAQ7L5Y9 396 aa23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 SSFA2P28290 1259 aa23.2■■□□□ 1.3
CACNA1B-201ENST00000277549 NAA16Q6N069 864 aaPredicted RBP23.19■■□□□ 1.3
CACNA1B-201ENST00000277549 PFDN4Q9NQP4 134 aa23.19■■□□□ 1.3
CACNA1B-201ENST00000277549 KLF18A0A0U1RQI7 1052 aa23.19■■□□□ 1.3
CACNA1B-201ENST00000277549 KRT5P13647 590 aa23.19■■□□□ 1.3
CACNA1B-201ENST00000277549 SREK1Q8WXA9 508 aaKnown RBP23.19■■□□□ 1.3
CACNA1B-201ENST00000277549 GBP3Q9H0R5 595 aa23.19■■□□□ 1.3
CACNA1B-201ENST00000277549 MARCKSP29966 332 aaPredicted RBP23.18■■□□□ 1.3
CACNA1B-201ENST00000277549 NOP9Q86U38 636 aaKnown RBP23.18■■□□□ 1.3
CACNA1B-201ENST00000277549 DBF4Q9UBU7 674 aaPredicted RBP23.18■■□□□ 1.3
CACNA1B-201ENST00000277549 SNX16P57768 344 aa23.18■■□□□ 1.3
CACNA1B-201ENST00000277549 PPP1R21Q6ZMI0 780 aa23.18■■□□□ 1.3
CACNA1B-201ENST00000277549 DDX39AO00148 427 aaKnown RBP23.18■■□□□ 1.3
CACNA1B-201ENST00000277549 SPAG5Q96R06 1193 aa23.18■■□□□ 1.3
CACNA1B-201ENST00000277549 NAA15Q9BXJ9 866 aaKnown RBP23.18■■□□□ 1.3
CACNA1B-201ENST00000277549 RXRAP19793 462 aa23.18■■□□□ 1.3
CACNA1B-201ENST00000277549 CFTRP13569 1480 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 PI4KAP2A4QPH2 592 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 PI4KAP1Q8N8J0 262 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 SPDYE3A6NKU9 549 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 ASIC1P78348 528 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 ATAD2Q6PL18 1390 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 ERCC5P28715 1186 aaPredicted RBP23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 GEN1Q17RS7 908 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 CCDC24Q8N4L8 307 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 N4BP3O15049 544 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 PPARDQ03181 441 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 NLRP3Q96P20 1036 aa23.17■■□□□ 1.3
CACNA1B-201ENST00000277549 ANO3Q9BYT9 981 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms