RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 KIF18AQ8NI77 898 aa22.01■■□□□ 1.11
SSC4D-201ENST00000275560 PAXBP1Q9Y5B6 917 aa22.01■■□□□ 1.11
SSC4D-201ENST00000275560 IQCB1Q15051 598 aa22.01■■□□□ 1.11
SSC4D-201ENST00000275560 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.01■■□□□ 1.11
SSC4D-201ENST00000275560 ST7Q9NRC1 585 aa22.01■■□□□ 1.11
SSC4D-201ENST00000275560 ADAMTS13Q76LX8 1427 aa22■■□□□ 1.11
SSC4D-201ENST00000275560 RGPD8O14715 1765 aaPredicted RBP22■■□□□ 1.11
SSC4D-201ENST00000275560 GOLGA6L19H0YKK7 550 aa22■■□□□ 1.11
SSC4D-201ENST00000275560 FAM69CQ0P6D2 419 aa22■■□□□ 1.11
SSC4D-201ENST00000275560 NWD1Q149M9 1564 aa22■■□□□ 1.11
SSC4D-201ENST00000275560 SKILP12757 684 aa22■■□□□ 1.11
SSC4D-201ENST00000275560 RESTQ13127 1097 aa22■■□□□ 1.11
SSC4D-201ENST00000275560 ZBTB22O15209 634 aa21.99■■□□□ 1.11
SSC4D-201ENST00000275560 SLFN14P0C7P3 912 aa21.99■■□□□ 1.11
SSC4D-201ENST00000275560 CCDC129Q6ZRS4 1044 aa21.99■■□□□ 1.11
SSC4D-201ENST00000275560 SUCLG2Q96I99 432 aa21.99■■□□□ 1.11
SSC4D-201ENST00000275560 GOLPH3LQ9H4A5 285 aa21.99■■□□□ 1.11
SSC4D-201ENST00000275560 ESF1Q9H501 851 aaKnown RBP21.99■■□□□ 1.11
SSC4D-201ENST00000275560 TSPOAP1O95153 1857 aa21.99■■□□□ 1.11
SSC4D-201ENST00000275560 H3BQV1 296 aa21.98■■□□□ 1.11
SSC4D-201ENST00000275560 HSP90B1P14625 803 aaKnown RBP21.98■■□□□ 1.11
SSC4D-201ENST00000275560 ELF2Q15723 593 aa21.98■■□□□ 1.11
SSC4D-201ENST00000275560 IFFO2Q5TF58 517 aa21.98■■□□□ 1.11
SSC4D-201ENST00000275560 MPRIPQ6WCQ1 1025 aa21.98■■□□□ 1.11
SSC4D-201ENST00000275560 KLHL34Q8N239 644 aa21.98■■□□□ 1.11
SSC4D-201ENST00000275560 KAZALD1Q96I82 304 aa21.98■■□□□ 1.11
SSC4D-201ENST00000275560 BICC1Q9H694 974 aaKnown RBP21.98■■□□□ 1.11
SSC4D-201ENST00000275560 MTX1Q13505 466 aa21.98■■□□□ 1.11
SSC4D-201ENST00000275560 CCDC69A6NI79 296 aa21.97■■□□□ 1.11
SSC4D-201ENST00000275560 HDGFP51858 240 aaKnown RBP21.97■■□□□ 1.11
SSC4D-201ENST00000275560 AIMP1Q12904 312 aaKnown RBP21.97■■□□□ 1.11
SSC4D-201ENST00000275560 SYCP1Q15431 976 aa21.97■■□□□ 1.11
SSC4D-201ENST00000275560 PTPN14Q15678 1187 aa21.97■■□□□ 1.11
SSC4D-201ENST00000275560 PIK3C2AO00443 1686 aa21.97■■□□□ 1.11
SSC4D-201ENST00000275560 PTPRUQ92729 1446 aa21.97■■□□□ 1.11
SSC4D-201ENST00000275560 RNF20Q5VTR2 975 aa21.97■■□□□ 1.11
SSC4D-201ENST00000275560 COL15A1P39059 1388 aa21.96■■□□□ 1.11
SSC4D-201ENST00000275560 ANKRD1Q15327 319 aa21.96■■□□□ 1.11
SSC4D-201ENST00000275560 FBXO38Q6PIJ6 1188 aa21.96■■□□□ 1.11
SSC4D-201ENST00000275560 SEC62Q99442 399 aaKnown RBP21.96■■□□□ 1.11
SSC4D-201ENST00000275560 TMEM2Q9UHN6 1383 aa21.96■■□□□ 1.11
SSC4D-201ENST00000275560 BTBD11A6QL63 1104 aa21.96■■□□□ 1.11
SSC4D-201ENST00000275560 Q6ZUG5 572 aa21.96■■□□□ 1.11
SSC4D-201ENST00000275560 GTF3C6Q969F1 213 aa21.96■■□□□ 1.11
SSC4D-201ENST00000275560 MORC2Q9Y6X9 1032 aaPredicted RBP21.96■■□□□ 1.11
SSC4D-201ENST00000275560 CHD2O14647 1828 aaKnown RBP21.96■■□□□ 1.11
SSC4D-201ENST00000275560 G3BP1Q13283 466 aaKnown RBP eCLIP21.95■■□□□ 1.1
SSC4D-201ENST00000275560 PLPPR3Q6T4P5 718 aa21.95■■□□□ 1.1
SSC4D-201ENST00000275560 CCAR1Q8IX12 1150 aaKnown RBP21.95■■□□□ 1.1
SSC4D-201ENST00000275560 ABTB2Q8N961 1025 aa21.95■■□□□ 1.1
SSC4D-201ENST00000275560 CCZ1BP86790 482 aa21.95■■□□□ 1.1
SSC4D-201ENST00000275560 CCZ1P86791 482 aaPredicted RBP21.95■■□□□ 1.1
SSC4D-201ENST00000275560 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
SSC4D-201ENST00000275560 CCDC9Q9Y3X0 531 aaKnown RBP21.95■■□□□ 1.1
SSC4D-201ENST00000275560 BECN2A8MW95 431 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 GUCY1B3Q02153 619 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 NBPF6Q5VWK0 638 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 NYAP1Q6ZVC0 841 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 NBPF4Q96M43 638 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 BABAM1Q9NWV8 329 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 ERBB3P21860 1342 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 TAF5LO75529 589 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 ERC1Q8IUD2 1116 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 LRRN4CLQ8ND94 238 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 MED23Q9ULK4 1368 aa21.94■■□□□ 1.1
SSC4D-201ENST00000275560 TEFQ10587 303 aa21.93■■□□□ 1.1
SSC4D-201ENST00000275560 DHX40Q8IX18 779 aaKnown RBP21.93■■□□□ 1.1
SSC4D-201ENST00000275560 CEMIPQ8WUJ3 1361 aa21.93■■□□□ 1.1
SSC4D-201ENST00000275560 CDC25BP30305 580 aa21.93■■□□□ 1.1
SSC4D-201ENST00000275560 SCRN1Q12765 414 aa21.93■■□□□ 1.1
SSC4D-201ENST00000275560 AOPEPQ8N6M6 819 aa21.93■■□□□ 1.1
SSC4D-201ENST00000275560 ADD1P35611 737 aaKnown RBP21.92■■□□□ 1.1
SSC4D-201ENST00000275560 SLFNL1Q499Z3 407 aa21.92■■□□□ 1.1
SSC4D-201ENST00000275560 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
SSC4D-201ENST00000275560 ERICH4A6NGS2 130 aa21.92■■□□□ 1.1
SSC4D-201ENST00000275560 RBM6P78332 1123 aaKnown RBP21.92■■□□□ 1.1
SSC4D-201ENST00000275560 ZNF397Q8NF99 534 aaPredicted RBP21.92■■□□□ 1.1
SSC4D-201ENST00000275560 LRRC59Q96AG4 307 aaKnown RBP21.92■■□□□ 1.1
SSC4D-201ENST00000275560 HIP1O00291 1037 aa21.91■■□□□ 1.1
SSC4D-201ENST00000275560 GABPB1Q06547 395 aaPredicted RBP21.91■■□□□ 1.1
SSC4D-201ENST00000275560 TERF2Q15554 542 aa21.91■■□□□ 1.1
SSC4D-201ENST00000275560 STX1AQ16623 288 aa21.91■■□□□ 1.1
SSC4D-201ENST00000275560 MRFAP1L1Q96HT8 127 aa21.91■■□□□ 1.1
SSC4D-201ENST00000275560 NEK1Q96PY6 1258 aa21.91■■□□□ 1.1
SSC4D-201ENST00000275560 SNW1Q13573 536 aaKnown RBP21.91■■□□□ 1.1
SSC4D-201ENST00000275560 CCAR2Q8N163 923 aaKnown RBP21.91■■□□□ 1.1
SSC4D-201ENST00000275560 KRT222Q8N1A0 295 aa21.91■■□□□ 1.1
SSC4D-201ENST00000275560 USP28Q96RU2 1077 aa21.91■■□□□ 1.1
SSC4D-201ENST00000275560 DBF4Q9UBU7 674 aaPredicted RBP21.91■■□□□ 1.1
SSC4D-201ENST00000275560 ADGRL3Q9HAR2 1447 aa21.9■■□□□ 1.1
SSC4D-201ENST00000275560 CCT2P78371 535 aaKnown RBP21.9■■□□□ 1.1
SSC4D-201ENST00000275560 SARM1Q6SZW1 724 aa21.9■■□□□ 1.1
SSC4D-201ENST00000275560 NAP1L2Q9ULW6 460 aaPredicted RBP21.9■■□□□ 1.1
SSC4D-201ENST00000275560 GRM8O00222 908 aa21.9■■□□□ 1.1
SSC4D-201ENST00000275560 FGD1P98174 961 aa21.9■■□□□ 1.1
SSC4D-201ENST00000275560 KSR2Q6VAB6 950 aa21.9■■□□□ 1.1
SSC4D-201ENST00000275560 ZNF446Q9NWS9 450 aa21.9■■□□□ 1.1
SSC4D-201ENST00000275560 DIP2BQ9P265 1576 aa21.9■■□□□ 1.1
SSC4D-201ENST00000275560 NCOA5Q9HCD5 579 aaKnown RBP21.89■■□□□ 1.1
SSC4D-201ENST00000275560 TNRQ92752 1358 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms