RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 ATP7BP35670 1465 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 FBXO38Q6PIJ6 1188 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
CNGA3-201ENST00000272602 PTCH1Q13635 1447 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 A0A087WWV3 80 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 ZNF75DP51815 510 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 GNL2Q13823 731 aaKnown RBP12.72□□□□□ -0.37
CNGA3-201ENST00000272602 TTC6Q86TZ1 520 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 DNAJC2Q99543 621 aaKnown RBP12.72□□□□□ -0.37
CNGA3-201ENST00000272602 USP27XA6NNY8 438 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 RUFY3Q7L099 469 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 FAM177A1Q8N128 213 aaPredicted RBP12.72□□□□□ -0.37
CNGA3-201ENST00000272602 TMX1Q9H3N1 280 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 SNX14Q9Y5W7 946 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
CNGA3-201ENST00000272602 AFF2P51816 1311 aa12.71□□□□□ -0.37
CNGA3-201ENST00000272602 CCAR2Q8N163 923 aaKnown RBP12.71□□□□□ -0.37
CNGA3-201ENST00000272602 CHMP4CQ96CF2 233 aa12.71□□□□□ -0.37
CNGA3-201ENST00000272602 CYP46A1Q9Y6A2 500 aa12.71□□□□□ -0.37
CNGA3-201ENST00000272602 ERCC6LQ2NKX8 1250 aa12.71□□□□□ -0.37
CNGA3-201ENST00000272602 MED14O60244 1454 aa12.71□□□□□ -0.38
CNGA3-201ENST00000272602 H3BQV1 296 aa12.71□□□□□ -0.38
CNGA3-201ENST00000272602 PPFIA3O75145 1194 aa12.71□□□□□ -0.38
CNGA3-201ENST00000272602 NEXNQ0ZGT2 675 aa12.71□□□□□ -0.38
CNGA3-201ENST00000272602 TEX35Q5T0J7 233 aa12.71□□□□□ -0.38
CNGA3-201ENST00000272602 IFFO2Q5TF58 517 aa12.71□□□□□ -0.38
CNGA3-201ENST00000272602 KLHDC4Q8TBB5 520 aa12.71□□□□□ -0.38
CNGA3-201ENST00000272602 NEUROD6Q96NK8 337 aa12.71□□□□□ -0.38
CNGA3-201ENST00000272602 MTMR6Q9Y217 621 aa12.71□□□□□ -0.38
CNGA3-201ENST00000272602 ZKSCAN1P17029 563 aaPredicted RBP12.7□□□□□ -0.38
CNGA3-201ENST00000272602 AMOTQ4VCS5 1084 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 PUS7Q96PZ0 661 aaKnown RBP12.7□□□□□ -0.38
CNGA3-201ENST00000272602 RGS12O14924 1447 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 CCDC144CPQ8IYA2 1237 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 NEK11Q8NG66 645 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 SLU7O95391 586 aaKnown RBP12.7□□□□□ -0.38
CNGA3-201ENST00000272602 UBTFL1P0CB47 393 aaPredicted RBP12.7□□□□□ -0.38
CNGA3-201ENST00000272602 HSP90B1P14625 803 aaKnown RBP12.7□□□□□ -0.38
CNGA3-201ENST00000272602 HSPA4P34932 840 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 CCT4P50991 539 aaKnown RBP12.7□□□□□ -0.38
CNGA3-201ENST00000272602 FLIIQ13045 1269 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 CNTROBQ8N137 903 aa12.7□□□□□ -0.38
CNGA3-201ENST00000272602 MORC2Q9Y6X9 1032 aaPredicted RBP12.7□□□□□ -0.38
CNGA3-201ENST00000272602 CCDC69A6NI79 296 aa12.69□□□□□ -0.38
CNGA3-201ENST00000272602 CDC37L1Q7L3B6 337 aa12.69□□□□□ -0.38
CNGA3-201ENST00000272602 MNS1Q8NEH6 495 aa12.69□□□□□ -0.38
CNGA3-201ENST00000272602 ERCC4Q92889 916 aaPredicted RBP12.69□□□□□ -0.38
CNGA3-201ENST00000272602 PPLO60437 1756 aa12.69□□□□□ -0.38
CNGA3-201ENST00000272602 NRDCO43847 1150 aa12.69□□□□□ -0.38
CNGA3-201ENST00000272602 GNAI3P08754 354 aa12.69□□□□□ -0.38
CNGA3-201ENST00000272602 DDX11Q96FC9 970 aa12.69□□□□□ -0.38
CNGA3-201ENST00000272602 RPAP1Q9BWH6 1393 aaPredicted RBP12.69□□□□□ -0.38
CNGA3-201ENST00000272602 HNRNPH2P55795 449 aaKnown RBP12.68□□□□□ -0.38
CNGA3-201ENST00000272602 BMS1Q14692 1282 aaKnown RBP12.68□□□□□ -0.38
CNGA3-201ENST00000272602 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
CNGA3-201ENST00000272602 TMEM87AQ8NBN3 555 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 SMC2O95347 1197 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 ZNF853P0CG23 659 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 ZNF790Q6PG37 636 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 UBE3BQ7Z3V4 1068 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 STK11IPQ8N1F8 1099 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 FUCA2Q9BTY2 467 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 RAB11FIP3O75154 756 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 PHKG2P15735 406 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 ARHGAP29Q52LW3 1261 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 SYT10Q6XYQ8 523 aa12.68□□□□□ -0.38
CNGA3-201ENST00000272602 RAD50Q92878 1312 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 UBXN4Q92575 508 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 C10orf67Q8IYJ2 551 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 SEPT12Q8IYM1 358 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 OSBPL3Q9H4L5 887 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 SRGAP3O43295 1099 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 NR1I2O75469 434 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 SNW1Q13573 536 aaKnown RBP12.67□□□□□ -0.38
CNGA3-201ENST00000272602 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 TMCO3Q6UWJ1 677 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 ERO1AQ96HE7 468 aa12.67□□□□□ -0.38
CNGA3-201ENST00000272602 PTPRCP08575 1304 aa12.66□□□□□ -0.38
CNGA3-201ENST00000272602 ARGLU1Q9NWB6 273 aaPredicted RBP12.66□□□□□ -0.38
CNGA3-201ENST00000272602 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
CNGA3-201ENST00000272602 PA2G4Q9UQ80 394 aaKnown RBP12.66□□□□□ -0.38
CNGA3-201ENST00000272602 UBR1Q8IWV7 1749 aa12.66□□□□□ -0.38
CNGA3-201ENST00000272602 SKIDA1Q1XH10 827 aa12.66□□□□□ -0.38
CNGA3-201ENST00000272602 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
CNGA3-201ENST00000272602 RUFY2Q8WXA3 655 aa12.66□□□□□ -0.38
CNGA3-201ENST00000272602 CCDC171Q6TFL3 1326 aa12.66□□□□□ -0.38
CNGA3-201ENST00000272602 DIP2AQ14689 1571 aa12.66□□□□□ -0.38
CNGA3-201ENST00000272602 SF3B2Q13435 895 aaKnown RBP12.65□□□□□ -0.38
CNGA3-201ENST00000272602 ME3Q16798 604 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 LRRC8AQ8IWT6 810 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 SCAND2PQ9GZW5 306 aaPredicted RBP12.65□□□□□ -0.38
CNGA3-201ENST00000272602 DDX19AQ9NUU7 478 aaKnown RBP12.65□□□□□ -0.38
CNGA3-201ENST00000272602 SGSM2O43147 1006 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 URI1O94763 535 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms