RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 TNS1Q9HBL0 1735 aaKnown RBP15.35■□□□□ 0.05
CAPN9-201ENST00000271971 CTSWP56202 376 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 TFCP2Q12800 502 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 ARHGEF1Q92888 912 aaKnown RBP15.34■□□□□ 0.05
CAPN9-201ENST00000271971 UTP14AQ9BVJ6 771 aaKnown RBP15.34■□□□□ 0.05
CAPN9-201ENST00000271971 CCDC8Q9H0W5 538 aaPredicted RBP15.34■□□□□ 0.05
CAPN9-201ENST00000271971 GREM2Q9H772 168 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 SH3TC1Q8TE82 1336 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 SPEF2Q9C093 1822 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 NTSR2O95665 410 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 LRRC24Q50LG9 513 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 TBC1D9BQ66K14 1250 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 TTLL11Q8NHH1 800 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 PI4K2BQ8TCG2 481 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 PUS3Q9BZE2 481 aaKnown RBP15.34■□□□□ 0.05
CAPN9-201ENST00000271971 NARFQ9UHQ1 456 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 COL24A1Q17RW2 1714 aa15.34■□□□□ 0.05
CAPN9-201ENST00000271971 CDC45O75419 566 aa15.33■□□□□ 0.04
CAPN9-201ENST00000271971 MAP4K4O95819 1239 aaPredicted RBP15.33■□□□□ 0.04
CAPN9-201ENST00000271971 CSF1RP07333 972 aa15.33■□□□□ 0.04
CAPN9-201ENST00000271971 IFIT2P09913 472 aaKnown RBP15.33■□□□□ 0.04
CAPN9-201ENST00000271971 PARP10Q53GL7 1025 aa15.33■□□□□ 0.04
CAPN9-201ENST00000271971 ATG9AQ7Z3C6 839 aa15.33■□□□□ 0.04
CAPN9-201ENST00000271971 ZPR1O75312 459 aa15.33■□□□□ 0.04
CAPN9-201ENST00000271971 CLEC4GQ6UXB4 293 aa15.33■□□□□ 0.04
CAPN9-201ENST00000271971 PROM2Q8N271 834 aa15.33■□□□□ 0.04
CAPN9-201ENST00000271971 PDE8AO60658 829 aa15.32■□□□□ 0.04
CAPN9-201ENST00000271971 TXNRD1Q16881 649 aa15.32■□□□□ 0.04
CAPN9-201ENST00000271971 AOX1Q06278 1338 aa15.32■□□□□ 0.04
CAPN9-201ENST00000271971 TRIM6-TRIM34B2RNG4 842 aa15.32■□□□□ 0.04
CAPN9-201ENST00000271971 ITGA6P23229 1130 aa15.32■□□□□ 0.04
CAPN9-201ENST00000271971 IFIT5Q13325 482 aaKnown RBP15.32■□□□□ 0.04
CAPN9-201ENST00000271971 SLC27A3Q5K4L6 730 aa15.32■□□□□ 0.04
CAPN9-201ENST00000271971 USP42Q9H9J4 1324 aaKnown RBP15.31■□□□□ 0.04
CAPN9-201ENST00000271971 EYA2O00167 538 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 APBA3O96018 575 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 TAF7LQ5H9L4 462 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 RILPL2Q969X0 211 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 TAF1P21675 1872 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.31■□□□□ 0.04
CAPN9-201ENST00000271971 RFC4P35249 363 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 NFKBIBQ15653 356 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 TNNI3KQ59H18 835 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 TRAPPC3LQ5T215 181 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 FPGT-TNNI3KV9GXZ4 949 aa15.31■□□□□ 0.04
CAPN9-201ENST00000271971 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
CAPN9-201ENST00000271971 COL4A1P02462 1669 aa15.3■□□□□ 0.04
CAPN9-201ENST00000271971 ERFEQ4G0M1 354 aa15.29■□□□□ 0.04
CAPN9-201ENST00000271971 UPF2Q9HAU5 1272 aaKnown RBP15.29■□□□□ 0.04
CAPN9-201ENST00000271971 DBNLQ9UJU6 430 aaKnown RBP15.29■□□□□ 0.04
CAPN9-201ENST00000271971 ABCC12Q96J65 1359 aa15.29■□□□□ 0.04
CAPN9-201ENST00000271971 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
CAPN9-201ENST00000271971 LRP5O75197 1615 aa15.29■□□□□ 0.04
CAPN9-201ENST00000271971 IL15P40933 162 aaPredicted RBP15.29■□□□□ 0.04
CAPN9-201ENST00000271971 RIC1Q4ADV7 1423 aa15.29■□□□□ 0.04
CAPN9-201ENST00000271971 GPATCH3Q96I76 525 aa15.28■□□□□ 0.04
CAPN9-201ENST00000271971 ZNF609O15014 1411 aa15.28■□□□□ 0.04
CAPN9-201ENST00000271971 ANKRD18BA2A2Z9 1011 aa15.28■□□□□ 0.04
CAPN9-201ENST00000271971 CIAO1O76071 339 aa15.28■□□□□ 0.04
CAPN9-201ENST00000271971 C3orf67Q6ZVT6 689 aa15.28■□□□□ 0.04
CAPN9-201ENST00000271971 CCDC24Q8N4L8 307 aa15.28■□□□□ 0.04
CAPN9-201ENST00000271971 TBC1D32Q96NH3 1257 aa15.28■□□□□ 0.04
CAPN9-201ENST00000271971 SETDB2Q96T68 719 aa15.28■□□□□ 0.04
CAPN9-201ENST00000271971 DBNDD2Q9BQY9 259 aa15.28■□□□□ 0.04
CAPN9-201ENST00000271971 GLRX3O76003 335 aaKnown RBP15.27■□□□□ 0.04
CAPN9-201ENST00000271971 SEC31BQ9NQW1 1179 aa15.27■□□□□ 0.04
CAPN9-201ENST00000271971 ZNF827Q17R98 1081 aa15.27■□□□□ 0.03
CAPN9-201ENST00000271971 TNRC6CQ9HCJ0 1690 aaKnown RBP15.26■□□□□ 0.03
CAPN9-201ENST00000271971 ERC2O15083 957 aa15.26■□□□□ 0.03
CAPN9-201ENST00000271971 RGL2O15211 777 aa15.26■□□□□ 0.03
CAPN9-201ENST00000271971 TIMM10P62072 90 aa15.26■□□□□ 0.03
CAPN9-201ENST00000271971 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
CAPN9-201ENST00000271971 PLSCR1O15162 318 aa15.26■□□□□ 0.03
CAPN9-201ENST00000271971 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
CAPN9-201ENST00000271971 NBPF5PQ86XG9 351 aaPredicted RBP15.26■□□□□ 0.03
CAPN9-201ENST00000271971 NEUROD6Q96NK8 337 aa15.26■□□□□ 0.03
CAPN9-201ENST00000271971 C22orf23Q9BZE7 217 aa15.26■□□□□ 0.03
CAPN9-201ENST00000271971 BOLA2Q9H3K6 86 aa15.26■□□□□ 0.03
CAPN9-201ENST00000271971 ADRA2BP18089 450 aa15.25■□□□□ 0.03
CAPN9-201ENST00000271971 CNNM1Q9NRU3 951 aa15.25■□□□□ 0.03
CAPN9-201ENST00000271971 RGPD3A6NKT7 1758 aaPredicted RBP15.25■□□□□ 0.03
CAPN9-201ENST00000271971 RGPD4Q7Z3J3 1758 aa15.25■□□□□ 0.03
CAPN9-201ENST00000271971 SSFA2P28290 1259 aa15.25■□□□□ 0.03
CAPN9-201ENST00000271971 CASC1Q6TDU7 716 aa15.25■□□□□ 0.03
CAPN9-201ENST00000271971 CEP126Q9P2H0 1117 aa15.25■□□□□ 0.03
CAPN9-201ENST00000271971 RIPOR2Q9Y4F9 1068 aa15.25■□□□□ 0.03
CAPN9-201ENST00000271971 NDUFB9Q9Y6M9 179 aa15.25■□□□□ 0.03
CAPN9-201ENST00000271971 A0A1B0GUL7 405 aa15.24■□□□□ 0.03
CAPN9-201ENST00000271971 NFIXQ14938 502 aa15.24■□□□□ 0.03
CAPN9-201ENST00000271971 CCDC152Q4G0S7 254 aa15.24■□□□□ 0.03
CAPN9-201ENST00000271971 CNTROBQ8N137 903 aa15.24■□□□□ 0.03
CAPN9-201ENST00000271971 GYS1P13807 737 aa15.24■□□□□ 0.03
CAPN9-201ENST00000271971 CHMLP26374 656 aa15.24■□□□□ 0.03
CAPN9-201ENST00000271971 METTL24Q5JXM2 366 aa15.24■□□□□ 0.03
CAPN9-201ENST00000271971 EDC3Q96F86 508 aaKnown RBP15.23■□□□□ 0.03
CAPN9-201ENST00000271971 NYXQ9GZU5 481 aa15.23■□□□□ 0.03
CAPN9-201ENST00000271971 IL25Q9H293 177 aa15.23■□□□□ 0.03
CAPN9-201ENST00000271971 TFCP2L1Q9NZI6 479 aa15.23■□□□□ 0.03
CAPN9-201ENST00000271971 DAXXQ9UER7 740 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms