RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 NLRP5P59047 1200 aa15.08■□□□□ 0.01
PRDM16-201ENST00000270722 KIAA0753Q2KHM9 967 aa15.08■□□□□ 0.01
PRDM16-201ENST00000270722 DDX27Q96GQ7 796 aaKnown RBP15.08■□□□□ 0.01
PRDM16-201ENST00000270722 CRNKL1Q9BZJ0 848 aaKnown RBP15.08■□□□□ 0
PRDM16-201ENST00000270722 RASAL2Q9UJF2 1139 aa15.08■□□□□ 0
PRDM16-201ENST00000270722 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
PRDM16-201ENST00000270722 EBAG9O00559 213 aa15.08■□□□□ 0
PRDM16-201ENST00000270722 SLC8A3P57103 927 aa15.08■□□□□ 0
PRDM16-201ENST00000270722 TRMT112Q9UI30 125 aaKnown RBP15.08■□□□□ 0
PRDM16-201ENST00000270722 CCDC155Q8N6L0 562 aa15.08■□□□□ 0
PRDM16-201ENST00000270722 RFC4P35249 363 aa15.08■□□□□ 0
PRDM16-201ENST00000270722 PTPN14Q15678 1187 aa15.08■□□□□ 0
PRDM16-201ENST00000270722 CCDC40Q4G0X9 1142 aa15.08■□□□□ 0
PRDM16-201ENST00000270722 TOP1P11387 765 aaKnown RBP15.07■□□□□ 0
PRDM16-201ENST00000270722 RLBP1P12271 317 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 CKAP2LQ8IYA6 745 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 MCM6Q14566 821 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 KRT13P13646 458 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
PRDM16-201ENST00000270722 MICALL1Q8N3F8 863 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.07■□□□□ 0
PRDM16-201ENST00000270722 WIZO95785 1651 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 UBE4AQ14139 1066 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 MIER3Q7Z3K6 550 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 CCDC114Q96M63 670 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 NUP88Q99567 741 aaPredicted RBP15.07■□□□□ 0
PRDM16-201ENST00000270722 LUC7L3O95232 432 aaKnown RBP15.07■□□□□ 0
PRDM16-201ENST00000270722 CCDC110Q8TBZ0 833 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 KAT14Q9H8E8 782 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 GOPCQ9HD26 462 aa15.07■□□□□ 0
PRDM16-201ENST00000270722 JDP2Q8WYK2 163 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 NUCKS1Q9H1E3 243 aaKnown RBP15.06■□□□□ 0
PRDM16-201ENST00000270722 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 TMEM132EQ6IEE7 984 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 SPC24Q8NBT2 197 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.06■□□□□ 0
PRDM16-201ENST00000270722 C6orf50Q9HD87 102 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 ATP2A2P16615 1042 aaKnown RBP15.06■□□□□ 0
PRDM16-201ENST00000270722 TCERG1LQ5VWI1 586 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 ANAPC4Q9UJX5 808 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 CACNA2D3Q8IZS8 1091 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 STIM2Q9P246 746 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 ARL1P40616 181 aaPredicted RBP15.06■□□□□ 0
PRDM16-201ENST00000270722 MTIF2P46199 727 aaKnown RBP15.06■□□□□ 0
PRDM16-201ENST00000270722 ATP11AP98196 1134 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 GBP1P32455 592 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 CASQ1P31415 396 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 EXOSC9Q06265 439 aaKnown RBP15.06■□□□□ 0
PRDM16-201ENST00000270722 SH2D4AQ9H788 454 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 HECW1Q76N89 1606 aa15.06■□□□□ 0
PRDM16-201ENST00000270722 TOM1O60784 492 aa15.05■□□□□ 0
PRDM16-201ENST00000270722 TSNAXIP1Q2TAA8 658 aa15.05■□□□□ 0
PRDM16-201ENST00000270722 NOB1Q9ULX3 412 aaKnown RBP15.05■□□□□ 0
PRDM16-201ENST00000270722 CWC27Q6UX04 472 aaKnown RBP15.05■□□□□ 0
PRDM16-201ENST00000270722 VCX3BQ9H321 246 aa15.05■□□□□ 0
PRDM16-201ENST00000270722 DBF4Q9UBU7 674 aaPredicted RBP15.05■□□□□ 0
PRDM16-201ENST00000270722 PHACTR2O75167 634 aa15.05■□□□□ -0
PRDM16-201ENST00000270722 CCDC152Q4G0S7 254 aa15.05■□□□□ -0
PRDM16-201ENST00000270722 USP25Q9UHP3 1055 aa15.05■□□□□ -0
PRDM16-201ENST00000270722 UQCRFS1P1P0C7P4 283 aa15.05■□□□□ -0
PRDM16-201ENST00000270722 TAF7Q15545 349 aaPredicted RBP15.05■□□□□ -0
PRDM16-201ENST00000270722 EFCAB5A4FU69 1503 aa15.05■□□□□ -0
PRDM16-201ENST00000270722 RFC1P35251 1148 aaPredicted RBP15.05■□□□□ -0
PRDM16-201ENST00000270722 BLVRAP53004 296 aa15.05■□□□□ -0
PRDM16-201ENST00000270722 MAP7D1Q3KQU3 841 aa15.05■□□□□ -0
PRDM16-201ENST00000270722 TEX2Q8IWB9 1127 aa15.05■□□□□ -0
PRDM16-201ENST00000270722 FAM177A1Q8N128 213 aaPredicted RBP15.05■□□□□ -0
PRDM16-201ENST00000270722 TXNDC16Q9P2K2 825 aa15.05■□□□□ -0
PRDM16-201ENST00000270722 LRRC23Q53EV4 343 aaPredicted RBP15.04■□□□□ -0
PRDM16-201ENST00000270722 CCDC121Q6ZUS5 278 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 OTUD6BQ8N6M0 293 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 CABP1Q9NZU7 370 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 PUF60Q9UHX1 559 aaKnown RBP15.04■□□□□ -0
PRDM16-201ENST00000270722 MKL2Q9ULH7 1088 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 TNNI2P48788 182 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 ZNF354CQ86Y25 554 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 HMG20BQ9P0W2 317 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 ALDH3A1P30838 453 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 GCKP35557 465 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 SPAG1Q07617 926 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 KIF4BQ2VIQ3 1234 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 TRERF1Q96PN7 1200 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 CCDC171Q6TFL3 1326 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 TTC21BQ7Z4L5 1316 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 CTAGE1Q96RT6 745 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 CHD1LQ86WJ1 897 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 FGD5Q6ZNL6 1462 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 SELENOOQ9BVL4 669 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 WDR70Q9NW82 654 aa15.04■□□□□ -0
PRDM16-201ENST00000270722 IFIT3O14879 490 aaKnown RBP15.03■□□□□ -0
PRDM16-201ENST00000270722 SUPT6HQ7KZ85 1726 aaKnown RBP15.03■□□□□ -0
PRDM16-201ENST00000270722 PSMD7P51665 324 aa15.03■□□□□ -0
PRDM16-201ENST00000270722 HLTFQ14527 1009 aaKnown RBP eCLIP15.03■□□□□ -0
PRDM16-201ENST00000270722 LMBR1Q8WVP7 490 aa15.03■□□□□ -0
PRDM16-201ENST00000270722 CNNM2Q9H8M5 875 aa15.03■□□□□ -0
PRDM16-201ENST00000270722 NYXQ9GZU5 481 aa15.03■□□□□ -0
PRDM16-201ENST00000270722 C9orf84Q5VXU9 1444 aa15.03■□□□□ -0
PRDM16-201ENST00000270722 CASQ2O14958 399 aaPredicted RBP15.03■□□□□ -0
PRDM16-201ENST00000270722 TSPY2A6NKD2 308 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms