RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 HMG20BQ9P0W2 317 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
SRRM4-201ENST00000267260 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 UBASH3AP57075 661 aa13.76□□□□□ -0.21
SRRM4-201ENST00000267260 ZNF530Q6P9A1 599 aaPredicted RBP13.76□□□□□ -0.21
SRRM4-201ENST00000267260 UBA7P41226 1012 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 FAM76AQ8TAV0 307 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 SLC5A1P13866 664 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 ALDH1L2Q3SY69 923 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 CCDC102BQ68D86 513 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 ZNF165P49910 485 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 TOM1L2Q6ZVM7 507 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 RGS22Q8NE09 1264 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 AK9Q5TCS8 1911 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 SATB1Q01826 763 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 ZSWIM4Q9H7M6 989 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 TRAF1Q13077 416 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 INTS8Q75QN2 995 aaKnown RBP13.75□□□□□ -0.21
SRRM4-201ENST00000267260 CDCA7LQ96GN5 454 aa13.75□□□□□ -0.21
SRRM4-201ENST00000267260 PPP1R1BQ9UD71 204 aaPredicted RBP13.75□□□□□ -0.21
SRRM4-201ENST00000267260 PHLDB2Q86SQ0 1253 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 TSR2Q969E8 191 aaKnown RBP13.74□□□□□ -0.21
SRRM4-201ENST00000267260 SEC62Q99442 399 aaKnown RBP13.74□□□□□ -0.21
SRRM4-201ENST00000267260 KRT83P78385 493 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 CEP85LQ5SZL2 805 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 GSTA5Q7RTV2 222 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 PDE1CQ14123 709 aaPredicted RBP13.74□□□□□ -0.21
SRRM4-201ENST00000267260 PDE4BQ07343 736 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 CKAP2LQ8IYA6 745 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 ZEB2O60315 1214 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 MAP7Q14244 749 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 MSANTD4Q8NCY6 345 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 MYO1BO43795 1136 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 NEDD9Q14511 834 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 PRR16Q569H4 304 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 ATAD2Q6PL18 1390 aa13.74□□□□□ -0.21
SRRM4-201ENST00000267260 KRT86O43790 486 aa13.73□□□□□ -0.21
SRRM4-201ENST00000267260 ANKIB1Q9P2G1 1089 aa13.73□□□□□ -0.21
SRRM4-201ENST00000267260 FCHSD2O94868 740 aa13.73□□□□□ -0.21
SRRM4-201ENST00000267260 WHAMMQ8TF30 809 aa13.73□□□□□ -0.21
SRRM4-201ENST00000267260 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
SRRM4-201ENST00000267260 TBCAO75347 108 aaKnown RBP13.73□□□□□ -0.21
SRRM4-201ENST00000267260 HDXQ7Z353 690 aa13.73□□□□□ -0.21
SRRM4-201ENST00000267260 EVI5LQ96CN4 794 aa13.73□□□□□ -0.21
SRRM4-201ENST00000267260 IFIT3O14879 490 aaKnown RBP13.73□□□□□ -0.21
SRRM4-201ENST00000267260 SEPT10Q9P0V9 454 aa13.73□□□□□ -0.21
SRRM4-201ENST00000267260 SYNJ2O15056 1496 aa13.73□□□□□ -0.21
SRRM4-201ENST00000267260 SPAG1Q07617 926 aa13.73□□□□□ -0.21
SRRM4-201ENST00000267260 KCNG4Q8TDN1 519 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 TRIM47Q96LD4 638 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 OGFRQ9NZT2 677 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 NCOA2Q15596 1464 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 LRSAM1Q6UWE0 723 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 SMAP1Q8IYB5 467 aaPredicted RBP13.72□□□□□ -0.21
SRRM4-201ENST00000267260 BICD1Q96G01 975 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 PTPRCP08575 1304 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 MGEA5O60502 916 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
SRRM4-201ENST00000267260 FANCD2Q9BXW9 1451 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 CLCN1P35523 988 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 WHAMMP3Q1A5X7 153 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 MTRF1LQ9UGC7 380 aaKnown RBP13.72□□□□□ -0.21
SRRM4-201ENST00000267260 CCDC141Q6ZP82 1450 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 N4BP3O15049 544 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 ZNF365Q70YC5 407 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 AKR1B10O60218 316 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 KRT13P13646 458 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 ZPR1O75312 459 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 STAT6P42226 847 aa13.72□□□□□ -0.21
SRRM4-201ENST00000267260 PRPF40BQ6NWY9 871 aaKnown RBP13.71□□□□□ -0.21
SRRM4-201ENST00000267260 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
SRRM4-201ENST00000267260 KRBA2Q6ZNG9 492 aa13.71□□□□□ -0.21
SRRM4-201ENST00000267260 CCDC170Q8IYT3 715 aa13.71□□□□□ -0.21
SRRM4-201ENST00000267260 ITSN2Q9NZM3 1697 aa13.71□□□□□ -0.21
SRRM4-201ENST00000267260 NBPF7P0C2Y1 421 aaPredicted RBP13.71□□□□□ -0.21
SRRM4-201ENST00000267260 IFIT5Q13325 482 aaKnown RBP13.71□□□□□ -0.21
SRRM4-201ENST00000267260 GOLGA8AA7E2F4 631 aa13.71□□□□□ -0.21
SRRM4-201ENST00000267260 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.21
SRRM4-201ENST00000267260 SYKP43405 635 aa13.71□□□□□ -0.21
SRRM4-201ENST00000267260 ZMAT2Q96NC0 199 aaKnown RBP13.71□□□□□ -0.21
SRRM4-201ENST00000267260 IMPG2Q9BZV3 1241 aa13.71□□□□□ -0.21
SRRM4-201ENST00000267260 ERCC3P19447 782 aa13.71□□□□□ -0.22
SRRM4-201ENST00000267260 FYB2Q5VWT5 728 aa13.71□□□□□ -0.22
SRRM4-201ENST00000267260 GABPB2Q8TAK5 448 aaPredicted RBP13.71□□□□□ -0.22
SRRM4-201ENST00000267260 CASKIN1Q8WXD9 1431 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 VAV2P52735 878 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 NOLC1Q14978 699 aaKnown RBP eCLIP13.7□□□□□ -0.22
SRRM4-201ENST00000267260 SPTY2D1Q68D10 685 aaPredicted RBP13.7□□□□□ -0.22
SRRM4-201ENST00000267260 FERMT3Q86UX7 667 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 SAMM50Q9Y512 469 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 EPRSP07814 1512 aaKnown RBP13.7□□□□□ -0.22
SRRM4-201ENST00000267260 AFAP1L2Q8N4X5 818 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 KIAA1107Q9UPP5 1409 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 BAG3O95817 575 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 CDK19Q9BWU1 502 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 SH3BP5O60239 455 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 NBPF8Q3BBV2 869 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms