RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 SPATA32Q96LK8 384 aa9.73□□□□□ -0.85
NEDD1-201ENST00000266742 GIMAP6Q6P9H5 292 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 PLBD2Q8NHP8 589 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 KLHDC4Q8TBB5 520 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 TAF5LO75529 589 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 SASS6Q6UVJ0 657 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 MTERF4Q7Z6M4 381 aaKnown RBP9.72□□□□□ -0.85
NEDD1-201ENST00000266742 MED23Q9ULK4 1368 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 TFCP2Q12800 502 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 FERMT3Q86UX7 667 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 PDCL3Q9H2J4 239 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 DDX19AQ9NUU7 478 aaKnown RBP9.72□□□□□ -0.85
NEDD1-201ENST00000266742 CFAP45Q9UL16 551 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.72□□□□□ -0.85
NEDD1-201ENST00000266742 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 CRYBG1Q9Y4K1 1723 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 HMGN5P82970 282 aaKnown RBP9.72□□□□□ -0.85
NEDD1-201ENST00000266742 RABL6Q3YEC7 729 aaPredicted RBP9.72□□□□□ -0.85
NEDD1-201ENST00000266742 TNMDQ9H2S6 317 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 ZSCAN16Q9H4T2 348 aaPredicted RBP9.72□□□□□ -0.85
NEDD1-201ENST00000266742 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.72□□□□□ -0.85
NEDD1-201ENST00000266742 USP16Q9Y5T5 823 aa9.72□□□□□ -0.85
NEDD1-201ENST00000266742 PTPN12Q05209 780 aaKnown RBP9.71□□□□□ -0.85
NEDD1-201ENST00000266742 USPL1Q5W0Q7 1092 aa9.71□□□□□ -0.85
NEDD1-201ENST00000266742 DBNLQ9UJU6 430 aaKnown RBP9.71□□□□□ -0.85
NEDD1-201ENST00000266742 COL15A1P39059 1388 aa9.71□□□□□ -0.85
NEDD1-201ENST00000266742 STK3Q13188 491 aa9.71□□□□□ -0.86
NEDD1-201ENST00000266742 UBE2Q2Q8WVN8 375 aa9.71□□□□□ -0.86
NEDD1-201ENST00000266742 NEUROD6Q96NK8 337 aa9.71□□□□□ -0.86
NEDD1-201ENST00000266742 HAUS7Q99871 368 aa9.71□□□□□ -0.86
NEDD1-201ENST00000266742 UQCRHLA0A096LP55 91 aa9.71□□□□□ -0.86
NEDD1-201ENST00000266742 UQCRHP07919 91 aa9.71□□□□□ -0.86
NEDD1-201ENST00000266742 BICD2Q8TD16 824 aa9.71□□□□□ -0.86
NEDD1-201ENST00000266742 ZNF142P52746 1687 aaPredicted RBP9.7□□□□□ -0.86
NEDD1-201ENST00000266742 KIF1AQ12756 1690 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 ATP5J2-PTCD1G3V325 749 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 PTCD1O75127 700 aaKnown RBP9.7□□□□□ -0.86
NEDD1-201ENST00000266742 EPHA10Q5JZY3 1008 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 CDC37L1Q7L3B6 337 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 FAM200AQ8TCP9 573 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 RGPD2P0DJD1 1756 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 DYNC1I1O14576 645 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 CAVIN2O95810 425 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 CHAF1AQ13111 956 aaPredicted RBP9.7□□□□□ -0.86
NEDD1-201ENST00000266742 LMBR1LQ6UX01 489 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
NEDD1-201ENST00000266742 PIBF1Q8WXW3 757 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 TCEANC2Q96MN5 208 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 MST1RQ04912 1400 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 TTC6Q86TZ1 520 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 KBTBD3Q8NAB2 608 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 LLPHQ9BRT6 129 aaKnown RBP9.7□□□□□ -0.86
NEDD1-201ENST00000266742 HELLSQ9NRZ9 838 aa9.7□□□□□ -0.86
NEDD1-201ENST00000266742 CWC25Q9NXE8 425 aaPredicted RBP9.7□□□□□ -0.86
NEDD1-201ENST00000266742 KDM6AO15550 1401 aaPredicted RBP9.7□□□□□ -0.86
NEDD1-201ENST00000266742 IL15P40933 162 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-201ENST00000266742 TOB2Q14106 344 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-201ENST00000266742 Q6ZUG5 572 aa9.69□□□□□ -0.86
NEDD1-201ENST00000266742 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
NEDD1-201ENST00000266742 GTF3C6Q969F1 213 aa9.69□□□□□ -0.86
NEDD1-201ENST00000266742 DBNDD2Q9BQY9 259 aa9.69□□□□□ -0.86
NEDD1-201ENST00000266742 GPR108Q9NPR9 543 aa9.69□□□□□ -0.86
NEDD1-201ENST00000266742 RFX5P48382 616 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-201ENST00000266742 NOLC1Q14978 699 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEDD1-201ENST00000266742 PRIMPOLQ96LW4 560 aa9.69□□□□□ -0.86
NEDD1-201ENST00000266742 ST3GAL1Q11201 340 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 DDX46Q7L014 1031 aaKnown RBP9.68□□□□□ -0.86
NEDD1-201ENST00000266742 DHX32Q7L7V1 743 aaKnown RBP9.68□□□□□ -0.86
NEDD1-201ENST00000266742 JARID2Q92833 1246 aaPredicted RBP9.68□□□□□ -0.86
NEDD1-201ENST00000266742 FUCA2Q9BTY2 467 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.68□□□□□ -0.86
NEDD1-201ENST00000266742 JCADQ9P266 1359 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 CAMTA1Q9Y6Y1 1673 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 EDC3Q96F86 508 aaKnown RBP9.68□□□□□ -0.86
NEDD1-201ENST00000266742 PAG1Q9NWQ8 432 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 DACT1Q9NYF0 836 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 TFIP11Q9UBB9 837 aaKnown RBP9.68□□□□□ -0.86
NEDD1-201ENST00000266742 SH3TC1Q8TE82 1336 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 CYP27B1O15528 508 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 GORABQ5T7V8 394 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 DRC7Q8IY82 874 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 LEO1Q8WVC0 666 aaPredicted RBP9.68□□□□□ -0.86
NEDD1-201ENST00000266742 DSCC1Q9BVC3 393 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 FAM13BQ9NYF5 915 aa9.68□□□□□ -0.86
NEDD1-201ENST00000266742 TYRO3Q06418 890 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 BRF1Q92994 677 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 MRC1P22897 1456 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 PIP4K2AP48426 406 aaPredicted RBP9.67□□□□□ -0.86
NEDD1-201ENST00000266742 CAMK4Q16566 473 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 ATL3Q6DD88 541 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 CCDC191Q8NCU4 936 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 ZNF396Q96N95 335 aaPredicted RBP9.67□□□□□ -0.86
NEDD1-201ENST00000266742 CTNNA3Q9UI47 895 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 NAP1L2Q9ULW6 460 aaPredicted RBP9.67□□□□□ -0.86
NEDD1-201ENST00000266742 H7C1W4 665 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 GOLIM4O00461 696 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 CTAGE5O15320 804 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 CYP21A2P08686 494 aa9.67□□□□□ -0.86
NEDD1-201ENST00000266742 IFIT1P09914 478 aaKnown RBP9.67□□□□□ -0.86
NEDD1-201ENST00000266742 CHRNA2Q15822 529 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms