RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 CRB1P82279 1406 aa17.17■□□□□ 0.34
PDLIM2-201ENST00000265810 ZSCAN31Q96LW9 406 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 USP5P45974 858 aa17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 ZSCAN29Q8IWY8 852 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 BICD2Q8TD16 824 aa17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 UBAC1Q9BSL1 405 aa17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 AFF2P51816 1311 aa17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 CCDC69A6NI79 296 aa17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 IL6STP40189 918 aaPredicted RBP17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 HAND2P61296 217 aa17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 TRIM37O94972 964 aa17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 ATP2B2Q01814 1243 aa17.16■□□□□ 0.34
PDLIM2-201ENST00000265810 ATG3Q9NT62 314 aa17.15■□□□□ 0.34
PDLIM2-201ENST00000265810 NMIQ13287 307 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-201ENST00000265810 SLC9C2Q5TAH2 1124 aa17.15■□□□□ 0.34
PDLIM2-201ENST00000265810 GIGYF2Q6Y7W6 1299 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-201ENST00000265810 DRC7Q8IY82 874 aa17.15■□□□□ 0.34
PDLIM2-201ENST00000265810 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
PDLIM2-201ENST00000265810 CHMLP26374 656 aa17.15■□□□□ 0.34
PDLIM2-201ENST00000265810 LARP1BQ659C4 914 aaKnown RBP17.14■□□□□ 0.34
PDLIM2-201ENST00000265810 JCADQ9P266 1359 aa17.14■□□□□ 0.33
PDLIM2-201ENST00000265810 CCDC83Q8IWF9 413 aa17.14■□□□□ 0.33
PDLIM2-201ENST00000265810 ZBTB38Q8NAP3 1195 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-201ENST00000265810 USP32Q8NFA0 1604 aa17.13■□□□□ 0.33
PDLIM2-201ENST00000265810 MCMDC2Q4G0Z9 681 aa17.13■□□□□ 0.33
PDLIM2-201ENST00000265810 ZFYP08048 801 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-201ENST00000265810 KRT27Q7Z3Y8 459 aa17.13■□□□□ 0.33
PDLIM2-201ENST00000265810 TAF5LO75529 589 aa17.13■□□□□ 0.33
PDLIM2-201ENST00000265810 HSPA1LP34931 641 aa17.13■□□□□ 0.33
PDLIM2-201ENST00000265810 ZNF772Q68DY9 489 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-201ENST00000265810 FAM196AQ6ZSG2 479 aa17.13■□□□□ 0.33
PDLIM2-201ENST00000265810 XBP1P17861 261 aa17.13■□□□□ 0.33
PDLIM2-201ENST00000265810 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 RBM8AQ9Y5S9 174 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 IKQ13123 557 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 WWC3Q9ULE0 1092 aa17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 NDUFB9Q9Y6M9 179 aa17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 POLR3DP05423 398 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 SIRT2Q8IXJ6 389 aa17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 XAGE2Q96GT9 111 aa17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 CTDP1Q9Y5B0 961 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-201ENST00000265810 GOLGA6L6A8MZA4 724 aa17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 CYP7A1P22680 504 aa17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 FIBPO43427 364 aa17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 PRPF40AO75400 957 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 CTSWP56202 376 aa17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 GSE1Q14687 1217 aa17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 RXRBP28702 533 aa17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 STK32BQ9NY57 414 aa17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 LIMCH1Q9UPQ0 1083 aa17.11■□□□□ 0.33
PDLIM2-201ENST00000265810 PALLDQ8WX93 1383 aa17.1■□□□□ 0.33
PDLIM2-201ENST00000265810 WDR33Q9C0J8 1336 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-201ENST00000265810 KCNQ2O43526 872 aa17.1■□□□□ 0.33
PDLIM2-201ENST00000265810 TRIM22Q8IYM9 498 aa17.1■□□□□ 0.33
PDLIM2-201ENST00000265810 EAF2Q96CJ1 260 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-201ENST00000265810 HMGB1P09429 215 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-201ENST00000265810 CEBPZQ03701 1054 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-201ENST00000265810 TCEANC2Q96MN5 208 aa17.1■□□□□ 0.33
PDLIM2-201ENST00000265810 RANBP6O60518 1105 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 DNTTIP2Q5QJE6 756 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 NBPF14Q5TI25 921 aa17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 MKNK2Q9HBH9 465 aa17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 JAG2Q9Y219 1238 aa17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 MAP2P11137 1827 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 LDHCP07864 332 aa17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 ANKRD2Q9GZV1 360 aa17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 PUM3Q15397 648 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 NRKQ7Z2Y5 1582 aa17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 BRMS1Q9HCU9 246 aa17.09■□□□□ 0.33
PDLIM2-201ENST00000265810 IFT172Q9UG01 1749 aa17.08■□□□□ 0.33
PDLIM2-201ENST00000265810 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.33
PDLIM2-201ENST00000265810 LRRC24Q50LG9 513 aa17.08■□□□□ 0.32
PDLIM2-201ENST00000265810 ZC3H12CQ9C0D7 883 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-201ENST00000265810 HMG20BQ9P0W2 317 aa17.08■□□□□ 0.32
PDLIM2-201ENST00000265810 IBTKQ9P2D0 1353 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-201ENST00000265810 TRAK2O60296 914 aa17.08■□□□□ 0.32
PDLIM2-201ENST00000265810 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.32
PDLIM2-201ENST00000265810 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
PDLIM2-201ENST00000265810 NAA16Q6N069 864 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-201ENST00000265810 SLF2Q8IX21 1173 aa17.07■□□□□ 0.32
PDLIM2-201ENST00000265810 IQSEC2Q5JU85 1478 aa17.07■□□□□ 0.32
PDLIM2-201ENST00000265810 TMOD2Q9NZR1 351 aa17.07■□□□□ 0.32
PDLIM2-201ENST00000265810 BAG3O95817 575 aa17.07■□□□□ 0.32
PDLIM2-201ENST00000265810 USP26Q9BXU7 913 aa17.07■□□□□ 0.32
PDLIM2-201ENST00000265810 GREM2Q9H772 168 aa17.07■□□□□ 0.32
PDLIM2-201ENST00000265810 GSPT1P15170 499 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 COPRSQ9NQ92 184 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 SH2B1Q9NRF2 756 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 CPDO75976 1380 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms