RNA–Protein interactions for RNA: ENST00000265732.9

RBM48-201, Transcript of RNA binding motif protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM48, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-201ENST00000265732 STYK1Q6J9G0 422 aa12.36□□□□□ -0.43
RBM48-201ENST00000265732 DDX46Q7L014 1031 aaKnown RBP12.36□□□□□ -0.43
RBM48-201ENST00000265732 CNKSR1Q969H4 720 aa12.36□□□□□ -0.43
RBM48-201ENST00000265732 RBM17Q96I25 401 aaKnown RBP12.36□□□□□ -0.43
RBM48-201ENST00000265732 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
RBM48-201ENST00000265732 CCDC152Q4G0S7 254 aa12.35□□□□□ -0.43
RBM48-201ENST00000265732 ITPRIPQ8IWB1 547 aa12.35□□□□□ -0.43
RBM48-201ENST00000265732 TMEM57Q8N5G2 664 aa12.35□□□□□ -0.43
RBM48-201ENST00000265732 USP44Q9H0E7 712 aa12.35□□□□□ -0.43
RBM48-201ENST00000265732 CASP7P55210 303 aa12.34□□□□□ -0.43
RBM48-201ENST00000265732 CTSWP56202 376 aa12.34□□□□□ -0.43
RBM48-201ENST00000265732 PANK1Q8TE04 598 aa12.34□□□□□ -0.43
RBM48-201ENST00000265732 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
RBM48-201ENST00000265732 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
RBM48-201ENST00000265732 SPEF2Q9C093 1822 aa12.34□□□□□ -0.43
RBM48-201ENST00000265732 UBTFL1P0CB47 393 aaPredicted RBP12.34□□□□□ -0.43
RBM48-201ENST00000265732 RLBP1P12271 317 aa12.34□□□□□ -0.43
RBM48-201ENST00000265732 SF3B3Q15393 1217 aaKnown RBP12.34□□□□□ -0.43
RBM48-201ENST00000265732 PRPF40BQ6NWY9 871 aaKnown RBP12.34□□□□□ -0.43
RBM48-201ENST00000265732 CCDC88AQ3V6T2 1871 aa12.33□□□□□ -0.44
RBM48-201ENST00000265732 YBX3P16989 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
RBM48-201ENST00000265732 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
RBM48-201ENST00000265732 TTLL11Q8NHH1 800 aa12.33□□□□□ -0.44
RBM48-201ENST00000265732 CRAMP1Q96RY5 1269 aa12.33□□□□□ -0.44
RBM48-201ENST00000265732 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
RBM48-201ENST00000265732 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
RBM48-201ENST00000265732 UTYO14607 1347 aa12.33□□□□□ -0.44
RBM48-201ENST00000265732 C21orf2O43822 256 aa12.32□□□□□ -0.44
RBM48-201ENST00000265732 GNAI3P08754 354 aa12.32□□□□□ -0.44
RBM48-201ENST00000265732 SUCLG2Q96I99 432 aa12.32□□□□□ -0.44
RBM48-201ENST00000265732 MEIS3Q99687 375 aa12.32□□□□□ -0.44
RBM48-201ENST00000265732 TMX4Q9H1E5 349 aaPredicted RBP12.32□□□□□ -0.44
RBM48-201ENST00000265732 CHD4Q14839 1912 aa12.32□□□□□ -0.44
RBM48-201ENST00000265732 GRIN3BO60391 1043 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 LMBR1LQ6UX01 489 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 BICC1Q9H694 974 aaKnown RBP12.31□□□□□ -0.44
RBM48-201ENST00000265732 GREM2Q9H772 168 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 SEC31BQ9NQW1 1179 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 BBOX1O75936 387 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 RRP1P56182 461 aaKnown RBP12.31□□□□□ -0.44
RBM48-201ENST00000265732 FOXO4P98177 505 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 GRAPQ13588 217 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 PDE3AQ14432 1141 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 EPHA10Q5JZY3 1008 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
RBM48-201ENST00000265732 CDC5LQ99459 802 aaKnown RBP12.31□□□□□ -0.44
RBM48-201ENST00000265732 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
RBM48-201ENST00000265732 PPEF1O14829 653 aaPredicted RBP12.3□□□□□ -0.44
RBM48-201ENST00000265732 CSF1RP07333 972 aa12.3□□□□□ -0.44
RBM48-201ENST00000265732 ITGA6P23229 1130 aa12.3□□□□□ -0.44
RBM48-201ENST00000265732 RPS8P62241 208 aaKnown RBP12.3□□□□□ -0.44
RBM48-201ENST00000265732 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
RBM48-201ENST00000265732 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
RBM48-201ENST00000265732 C20orf194Q5TEA3 1177 aa12.3□□□□□ -0.44
RBM48-201ENST00000265732 ARHGAP27Q6ZUM4 889 aa12.3□□□□□ -0.44
RBM48-201ENST00000265732 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
RBM48-201ENST00000265732 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
RBM48-201ENST00000265732 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
RBM48-201ENST00000265732 FER1L6Q2WGJ9 1857 aa12.29□□□□□ -0.44
RBM48-201ENST00000265732 ANKRD18BA2A2Z9 1011 aa12.29□□□□□ -0.44
RBM48-201ENST00000265732 MVPQ14764 893 aaKnown RBP12.29□□□□□ -0.44
RBM48-201ENST00000265732 TAF7LQ5H9L4 462 aa12.29□□□□□ -0.44
RBM48-201ENST00000265732 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
RBM48-201ENST00000265732 ANKRD18AQ8IVF6 992 aa12.29□□□□□ -0.44
RBM48-201ENST00000265732 GNAI2P04899 355 aa12.28□□□□□ -0.44
RBM48-201ENST00000265732 IGHMBP2P38935 993 aaKnown RBP12.28□□□□□ -0.44
RBM48-201ENST00000265732 OLFM4Q6UX06 510 aa12.28□□□□□ -0.44
RBM48-201ENST00000265732 MPHOSPH8Q99549 860 aa12.28□□□□□ -0.44
RBM48-201ENST00000265732 DDX19BQ9UMR2 479 aa12.28□□□□□ -0.44
RBM48-201ENST00000265732 SUPT16HQ9Y5B9 1047 aaKnown RBP12.28□□□□□ -0.44
RBM48-201ENST00000265732 SBF1O95248 1867 aa12.28□□□□□ -0.44
RBM48-201ENST00000265732 ZBTB7BO15156 539 aaPredicted RBP12.28□□□□□ -0.44
RBM48-201ENST00000265732 TMC4Q7Z404 712 aa12.28□□□□□ -0.44
RBM48-201ENST00000265732 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
RBM48-201ENST00000265732 RABL6Q3YEC7 729 aaPredicted RBP12.27□□□□□ -0.45
RBM48-201ENST00000265732 CCDC93Q567U6 631 aa12.27□□□□□ -0.45
RBM48-201ENST00000265732 RTKN2Q8IZC4 609 aa12.27□□□□□ -0.45
RBM48-201ENST00000265732 ANKRD44Q8N8A2 993 aa12.27□□□□□ -0.45
RBM48-201ENST00000265732 C7orf43Q8WVR3 580 aa12.27□□□□□ -0.45
RBM48-201ENST00000265732 CHMP4BQ9H444 224 aaKnown RBP12.27□□□□□ -0.45
RBM48-201ENST00000265732 ATP6V0A2Q9Y487 856 aa12.27□□□□□ -0.45
RBM48-201ENST00000265732 COL4A1P02462 1669 aa12.27□□□□□ -0.45
RBM48-201ENST00000265732 CC2D2BQ6DHV5 1058 aa12.26□□□□□ -0.45
RBM48-201ENST00000265732 SP8Q8IXZ3 490 aa12.26□□□□□ -0.45
RBM48-201ENST00000265732 C1orf115Q9H7X2 142 aa12.26□□□□□ -0.45
RBM48-201ENST00000265732 LDHAL6AQ6ZMR3 332 aa12.25□□□□□ -0.45
RBM48-201ENST00000265732 ZNF594Q96JF6 807 aaPredicted RBP12.25□□□□□ -0.45
RBM48-201ENST00000265732 TAOK3Q9H2K8 898 aa12.25□□□□□ -0.45
RBM48-201ENST00000265732 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
RBM48-201ENST00000265732 ANKIB1Q9P2G1 1089 aa12.25□□□□□ -0.45
RBM48-201ENST00000265732 NSFL1CQ9UNZ2 370 aaKnown RBP12.25□□□□□ -0.45
RBM48-201ENST00000265732 LRRC37AA6NMS7 1700 aa12.25□□□□□ -0.45
RBM48-201ENST00000265732 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
RBM48-201ENST00000265732 GRIPAP1Q4V328 841 aa12.25□□□□□ -0.45
RBM48-201ENST00000265732 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
RBM48-201ENST00000265732 SLC51AQ86UW1 340 aa12.25□□□□□ -0.45
RBM48-201ENST00000265732 MPNDQ8N594 471 aa12.25□□□□□ -0.45
RBM48-201ENST00000265732 CNNM1Q9NRU3 951 aa12.25□□□□□ -0.45
RBM48-201ENST00000265732 RASSF7Q02833 373 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms