RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 EHBP1L1Q8N3D4 1523 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 BOLA2Q9H3K6 86 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 NAP1L3Q99457 506 aaPredicted RBP18.8■□□□□ 0.6
USP13-201ENST00000263966 NCAPGQ9BPX3 1015 aa18.8■□□□□ 0.6
USP13-201ENST00000263966 RBM27Q9P2N5 1060 aaKnown RBP18.79■□□□□ 0.6
USP13-201ENST00000263966 PRG4Q92954 1404 aaPredicted RBP18.79■□□□□ 0.6
USP13-201ENST00000263966 IFIT1BQ5T764 474 aaKnown RBP18.79■□□□□ 0.6
USP13-201ENST00000263966 CTR9Q6PD62 1173 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 SH2D4AQ9H788 454 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 TMTC2Q8N394 836 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 TRIM6Q9C030 488 aaPredicted RBP18.79■□□□□ 0.6
USP13-201ENST00000263966 FAM169AQ9Y6X4 670 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 FAM13AO94988 1023 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 CFAP70Q5T0N1 1121 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 CDAN1Q8IWY9 1227 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 FGD6Q6ZV73 1430 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 OPA1O60313 960 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 GEN1Q17RS7 908 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 KRT23Q9C075 422 aa18.79■□□□□ 0.6
USP13-201ENST00000263966 JADE2Q9NQC1 790 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 CGNQ9P2M7 1197 aaKnown RBP18.78■□□□□ 0.6
USP13-201ENST00000263966 ADAMTS8Q9UP79 889 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 MRVI1Q9Y6F6 885 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 FAM114A2Q9NRY5 505 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 GABPAQ06546 454 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 RPAP2Q8IXW5 612 aaPredicted RBP18.78■□□□□ 0.6
USP13-201ENST00000263966 IVNS1ABPQ9Y6Y0 642 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 M0QZ92 97 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 STAT6P42226 847 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 ANKS4BQ8N8V4 417 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 ALDH3A1P30838 453 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 HACE1Q8IYU2 909 aa18.78■□□□□ 0.6
USP13-201ENST00000263966 PDZRN3Q9UPQ7 1066 aa18.77■□□□□ 0.6
USP13-201ENST00000263966 ARID4AP29374 1257 aaPredicted RBP18.77■□□□□ 0.6
USP13-201ENST00000263966 CFAP157Q5JU67 520 aa18.77■□□□□ 0.6
USP13-201ENST00000263966 LDHAL6AQ6ZMR3 332 aa18.77■□□□□ 0.6
USP13-201ENST00000263966 SPC25Q9HBM1 224 aa18.77■□□□□ 0.6
USP13-201ENST00000263966 NUDT16Q96DE0 195 aaKnown RBP18.77■□□□□ 0.6
USP13-201ENST00000263966 GPTP24298 496 aa18.77■□□□□ 0.6
USP13-201ENST00000263966 MAATS1Q7Z4T9 603 aa18.77■□□□□ 0.6
USP13-201ENST00000263966 CCDC6Q16204 474 aa18.77■□□□□ 0.59
USP13-201ENST00000263966 RSPH3Q86UC2 560 aa18.77■□□□□ 0.59
USP13-201ENST00000263966 AFAP1Q8N556 730 aa18.77■□□□□ 0.59
USP13-201ENST00000263966 NLRP3Q96P20 1036 aa18.77■□□□□ 0.59
USP13-201ENST00000263966 EEF2P13639 858 aaKnown RBP18.76■□□□□ 0.59
USP13-201ENST00000263966 ATP2B3Q16720 1220 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 UQCRFS1P1P0C7P4 283 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 TTC14Q96N46 770 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 EYA3Q99504 573 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 PAIP2Q9BPZ3 127 aaKnown RBP18.76■□□□□ 0.59
USP13-201ENST00000263966 IL1RAPL2Q9NP60 686 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 CAMSAP2Q08AD1 1489 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 CALM1P0DP23 149 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 CALM2P0DP24 149 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 CALM3P0DP25 149 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 GSDMDP57764 484 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 CNNM2Q9H8M5 875 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 TICAM2Q86XR7 235 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 DBF4Q9UBU7 674 aaPredicted RBP18.76■□□□□ 0.59
USP13-201ENST00000263966 DUSP27Q5VZP5 1158 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 TSR2Q969E8 191 aaKnown RBP18.76■□□□□ 0.59
USP13-201ENST00000263966 ZC3H12CQ9C0D7 883 aaKnown RBP18.76■□□□□ 0.59
USP13-201ENST00000263966 DYNC1I1O14576 645 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 CCDC114Q96M63 670 aa18.76■□□□□ 0.59
USP13-201ENST00000263966 METAP2P50579 478 aaKnown RBP eCLIP18.76■□□□□ 0.59
USP13-201ENST00000263966 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 STK10O94804 968 aaKnown RBP18.75■□□□□ 0.59
USP13-201ENST00000263966 PPP2R1AP30153 589 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 IARSP41252 1262 aaKnown RBP18.75■□□□□ 0.59
USP13-201ENST00000263966 HSF2BPO75031 334 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 CCDC125Q86Z20 511 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 AFAP1L2Q8N4X5 818 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 CCDC110Q8TBZ0 833 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 ERCC6LQ2NKX8 1250 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 CEP128Q6ZU80 1094 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 LMBR1Q8WVP7 490 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 SPAG5Q96R06 1193 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 CPLX3Q8WVH0 158 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 CTAGE1Q96RT6 745 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 CCDC50Q8IVM0 306 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 NSMCE1Q8WV22 266 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 CCDC183Q5T5S1 534 aa18.75■□□□□ 0.59
USP13-201ENST00000263966 DNAAF4Q8WXU2 420 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 RNF34Q969K3 372 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 EPSTI1Q96J88 318 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 NAIPQ13075 1403 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 CAMK4Q16566 473 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 KIFC2Q96AC6 838 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 MX1P20591 662 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 TRIM47Q96LD4 638 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 ATP6V1AP38606 617 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 ARHGEF6Q15052 776 aa18.74■□□□□ 0.59
USP13-201ENST00000263966 SLC5A4Q9NY91 659 aa18.73■□□□□ 0.59
USP13-201ENST00000263966 RBM25P49756 843 aaKnown RBP18.73■□□□□ 0.59
USP13-201ENST00000263966 MUM1L1Q5H9M0 696 aa18.73■□□□□ 0.59
USP13-201ENST00000263966 TCIRG1Q13488 830 aa18.73■□□□□ 0.59
USP13-201ENST00000263966 NCOA7Q8NI08 942 aa18.73■□□□□ 0.59
USP13-201ENST00000263966 KIF22Q14807 665 aa18.73■□□□□ 0.59
USP13-201ENST00000263966 EVI5LQ96CN4 794 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms