RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 TFCP2Q12800 502 aa13.39□□□□□ -0.27
PKP1-201ENST00000263946 CCDC183Q5T5S1 534 aa13.39□□□□□ -0.27
PKP1-201ENST00000263946 CEP57L1Q8IYX8 460 aa13.39□□□□□ -0.27
PKP1-201ENST00000263946 METTL22Q9BUU2 404 aaPredicted RBP13.39□□□□□ -0.27
PKP1-201ENST00000263946 DEF6Q9H4E7 631 aa13.39□□□□□ -0.27
PKP1-201ENST00000263946 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
PKP1-201ENST00000263946 CCDC196A0A1B0GTZ2 297 aa13.39□□□□□ -0.27
PKP1-201ENST00000263946 ZFYP08048 801 aaPredicted RBP13.39□□□□□ -0.27
PKP1-201ENST00000263946 IQCEQ6IPM2 695 aa13.39□□□□□ -0.27
PKP1-201ENST00000263946 KLHDC4Q8TBB5 520 aa13.39□□□□□ -0.27
PKP1-201ENST00000263946 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
PKP1-201ENST00000263946 NOL7Q9UMY1 257 aaKnown RBP13.39□□□□□ -0.27
PKP1-201ENST00000263946 RANBP6O60518 1105 aaKnown RBP13.38□□□□□ -0.27
PKP1-201ENST00000263946 TSPOAP1O95153 1857 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 DZIP1Q86YF9 867 aaKnown RBP13.38□□□□□ -0.27
PKP1-201ENST00000263946 USP6P35125 1406 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 DZIP3Q86Y13 1208 aaKnown RBP13.38□□□□□ -0.27
PKP1-201ENST00000263946 USP44Q9H0E7 712 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 PODXL2Q9NZ53 605 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 SLAIN2Q9P270 581 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 SLC12A7Q9Y666 1083 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 MAP3K4Q9Y6R4 1608 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 UQCRFS1P1P0C7P4 283 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 NLRP1Q9C000 1473 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 USP5P45974 858 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
PKP1-201ENST00000263946 UBAP1LF5GYI3 381 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 RBM5P52756 815 aaKnown RBP eCLIP13.38□□□□□ -0.27
PKP1-201ENST00000263946 IQCA1Q86XH1 822 aa13.38□□□□□ -0.27
PKP1-201ENST00000263946 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
PKP1-201ENST00000263946 LRRIQ1Q96JM4 1722 aa13.37□□□□□ -0.27
PKP1-201ENST00000263946 GIGYF1O75420 1035 aaPredicted RBP13.37□□□□□ -0.27
PKP1-201ENST00000263946 A1BGP04217 495 aa13.37□□□□□ -0.27
PKP1-201ENST00000263946 PLBD2Q8NHP8 589 aa13.37□□□□□ -0.27
PKP1-201ENST00000263946 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
PKP1-201ENST00000263946 SERPINC1P01008 464 aa13.37□□□□□ -0.27
PKP1-201ENST00000263946 ZGPATQ8N5A5 531 aaKnown RBP13.37□□□□□ -0.27
PKP1-201ENST00000263946 NIP7Q9Y221 180 aaKnown RBP eCLIP13.37□□□□□ -0.27
PKP1-201ENST00000263946 RNF17Q9BXT8 1623 aaKnown RBP13.37□□□□□ -0.27
PKP1-201ENST00000263946 SOGA3Q5TF21 947 aa13.37□□□□□ -0.27
PKP1-201ENST00000263946 NCOA7Q8NI08 942 aa13.37□□□□□ -0.27
PKP1-201ENST00000263946 IGSF1Q8N6C5 1336 aa13.37□□□□□ -0.27
PKP1-201ENST00000263946 MKNK2Q9HBH9 465 aa13.37□□□□□ -0.27
PKP1-201ENST00000263946 RAB11FIP4Q86YS3 637 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
PKP1-201ENST00000263946 GBP2P32456 591 aaPredicted RBP13.36□□□□□ -0.27
PKP1-201ENST00000263946 MICU3Q86XE3 530 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
PKP1-201ENST00000263946 FAM89AQ96GI7 184 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 IQSEC3Q9UPP2 1182 aaPredicted RBP13.36□□□□□ -0.27
PKP1-201ENST00000263946 ZSCAN22P10073 491 aaPredicted RBP13.36□□□□□ -0.27
PKP1-201ENST00000263946 SLC9C2Q5TAH2 1124 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 NBPF5PQ86XG9 351 aaPredicted RBP13.36□□□□□ -0.27
PKP1-201ENST00000263946 SMARCC1Q92922 1105 aaPredicted RBP13.36□□□□□ -0.27
PKP1-201ENST00000263946 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.27
PKP1-201ENST00000263946 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 GOLGA8AA7E2F4 631 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 IRS4O14654 1257 aaPredicted RBP13.36□□□□□ -0.27
PKP1-201ENST00000263946 DESP17661 470 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 TIMM10P62072 90 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 UBE2Q2Q8WVN8 375 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 CDK5RAP3Q96JB5 506 aa13.36□□□□□ -0.27
PKP1-201ENST00000263946 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
PKP1-201ENST00000263946 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
PKP1-201ENST00000263946 CCDC181Q5TID7 509 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 SUCLG2Q96I99 432 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 RBM27Q9P2N5 1060 aaKnown RBP13.35□□□□□ -0.27
PKP1-201ENST00000263946 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 CROCC2H7BZ55 1655 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 MCM5P33992 734 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 TMEM132AQ24JP5 1023 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 DACH1Q9UI36 760 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 A2ML1A8K2U0 1454 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 KIF24Q5T7B8 1368 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 AK2P54819 239 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 GCKRQ14397 625 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 SKIDA1Q1XH10 827 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 FILIP1Q7Z7B0 1213 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 HELBQ8NG08 1087 aaPredicted RBP13.35□□□□□ -0.27
PKP1-201ENST00000263946 CTCFLQ8NI51 663 aaPredicted RBP13.35□□□□□ -0.27
PKP1-201ENST00000263946 RPGRQ92834 1020 aaKnown RBP13.35□□□□□ -0.27
PKP1-201ENST00000263946 ZNF853P0CG23 659 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
PKP1-201ENST00000263946 TMEM67Q5HYA8 995 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
PKP1-201ENST00000263946 PPP1R1BQ9UD71 204 aaPredicted RBP13.35□□□□□ -0.27
PKP1-201ENST00000263946 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
PKP1-201ENST00000263946 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
PKP1-201ENST00000263946 RAB3GAP1Q15042 981 aa13.34□□□□□ -0.27
PKP1-201ENST00000263946 RFC4P35249 363 aa13.34□□□□□ -0.27
PKP1-201ENST00000263946 SF3B2Q13435 895 aaKnown RBP13.34□□□□□ -0.27
PKP1-201ENST00000263946 CCDC112Q8NEF3 446 aa13.34□□□□□ -0.27
PKP1-201ENST00000263946 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
PKP1-201ENST00000263946 ZNF287Q9HBT7 754 aa13.34□□□□□ -0.27
PKP1-201ENST00000263946 IARSP41252 1262 aaKnown RBP13.34□□□□□ -0.27
PKP1-201ENST00000263946 UBE2HP62256 183 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms