RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 LRP10Q7Z4F1 713 aa11.75□□□□□ -0.53
LCN1-201ENST00000263598 ZC3H15Q8WU90 426 aaKnown RBP11.75□□□□□ -0.53
LCN1-201ENST00000263598 HHIPL1Q96JK4 782 aa11.75□□□□□ -0.53
LCN1-201ENST00000263598 CCDC85CA6NKD9 419 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 AOC2O75106 756 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
LCN1-201ENST00000263598 AIMP1Q12904 312 aaKnown RBP11.74□□□□□ -0.53
LCN1-201ENST00000263598 GRAPQ13588 217 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 PROSER3Q2NL68 480 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 CDC37L1Q7L3B6 337 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 COPS6Q7L5N1 327 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 TMC4Q7Z404 712 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 GRAPLQ8TC17 118 aaPredicted RBP11.74□□□□□ -0.53
LCN1-201ENST00000263598 GLIS2Q9BZE0 524 aaPredicted RBP11.74□□□□□ -0.53
LCN1-201ENST00000263598 ZNF408Q9H9D4 720 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 PGAP2Q9UHJ9 254 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 TRMT112Q9UI30 125 aaKnown RBP11.74□□□□□ -0.53
LCN1-201ENST00000263598 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
LCN1-201ENST00000263598 H7C1D1 291 aa11.73□□□□□ -0.53
LCN1-201ENST00000263598 RAD17O75943 681 aa11.73□□□□□ -0.53
LCN1-201ENST00000263598 ANXA1P04083 346 aa11.73□□□□□ -0.53
LCN1-201ENST00000263598 BRPF1P55201 1214 aaPredicted RBP11.73□□□□□ -0.53
LCN1-201ENST00000263598 TCIRG1Q13488 830 aa11.73□□□□□ -0.53
LCN1-201ENST00000263598 XAGE3Q8WTP9 111 aa11.73□□□□□ -0.53
LCN1-201ENST00000263598 CNOT7Q9UIV1 285 aaKnown RBP11.73□□□□□ -0.53
LCN1-201ENST00000263598 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
LCN1-201ENST00000263598 TRPM7Q96QT4 1865 aa11.72□□□□□ -0.53
LCN1-201ENST00000263598 MLLT1Q03111 559 aaPredicted RBP11.72□□□□□ -0.53
LCN1-201ENST00000263598 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
LCN1-201ENST00000263598 HIRAP54198 1017 aaPredicted RBP11.71□□□□□ -0.53
LCN1-201ENST00000263598 MICALL2Q8IY33 904 aa11.71□□□□□ -0.53
LCN1-201ENST00000263598 TRPM4Q8TD43 1214 aa11.71□□□□□ -0.53
LCN1-201ENST00000263598 YDJCA8MPS7 323 aa11.7□□□□□ -0.54
LCN1-201ENST00000263598 TMPOP42166 694 aaKnown RBP11.7□□□□□ -0.54
LCN1-201ENST00000263598 RGS19P49795 217 aa11.7□□□□□ -0.54
LCN1-201ENST00000263598 NOGQ13253 232 aa11.7□□□□□ -0.54
LCN1-201ENST00000263598 WASHC4Q2M389 1173 aa11.7□□□□□ -0.54
LCN1-201ENST00000263598 DPF2Q92785 391 aa11.7□□□□□ -0.54
LCN1-201ENST00000263598 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
LCN1-201ENST00000263598 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
LCN1-201ENST00000263598 PLBD2Q8NHP8 589 aa11.69□□□□□ -0.54
LCN1-201ENST00000263598 CFAP44Q96MT7 982 aa11.69□□□□□ -0.54
LCN1-201ENST00000263598 NSFL1CQ9UNZ2 370 aaKnown RBP11.69□□□□□ -0.54
LCN1-201ENST00000263598 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
LCN1-201ENST00000263598 C6orf229H3BNL8 230 aa11.68□□□□□ -0.54
LCN1-201ENST00000263598 PSMD14O00487 310 aa11.68□□□□□ -0.54
LCN1-201ENST00000263598 CHL1O00533 1208 aa11.68□□□□□ -0.54
LCN1-201ENST00000263598 RPS12P25398 132 aaKnown RBP11.68□□□□□ -0.54
LCN1-201ENST00000263598 HUNKP57058 714 aa11.68□□□□□ -0.54
LCN1-201ENST00000263598 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
LCN1-201ENST00000263598 DCPSQ96C86 337 aaKnown RBP11.68□□□□□ -0.54
LCN1-201ENST00000263598 EYA3Q99504 573 aa11.68□□□□□ -0.54
LCN1-201ENST00000263598 MCOLN1Q9GZU1 580 aa11.68□□□□□ -0.54
LCN1-201ENST00000263598 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
LCN1-201ENST00000263598 LAS1LQ9Y4W2 734 aaKnown RBP11.68□□□□□ -0.54
LCN1-201ENST00000263598 LAMB2P55268 1798 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 SHTN1A0MZ66 631 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 RIMBP2O15034 1052 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 SLC34A2O95436 690 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 HOXB7P09629 217 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 DGKZQ13574 1117 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 RALBP1Q15311 655 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 SF3B3Q15393 1217 aaKnown RBP11.67□□□□□ -0.54
LCN1-201ENST00000263598 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 TBC1D10BQ4KMP7 808 aaPredicted RBP11.67□□□□□ -0.54
LCN1-201ENST00000263598 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 SAMD7Q7Z3H4 446 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 KRT26Q7Z3Y9 468 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 C2orf69Q8N8R5 385 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 ZNF428Q96B54 188 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 FAM89AQ96GI7 184 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 DBNDD1Q9H9R9 158 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
LCN1-201ENST00000263598 DUOX1Q9NRD9 1551 aa11.67□□□□□ -0.54
LCN1-201ENST00000263598 ATP5J2-PTCD1G3V325 749 aa11.66□□□□□ -0.54
LCN1-201ENST00000263598 ECE2O60344 883 aa11.66□□□□□ -0.54
LCN1-201ENST00000263598 GPSM2P81274 684 aa11.66□□□□□ -0.54
LCN1-201ENST00000263598 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
LCN1-201ENST00000263598 RGMBQ6NW40 437 aa11.66□□□□□ -0.54
LCN1-201ENST00000263598 CELF1Q92879 486 aaKnown RBP11.66□□□□□ -0.54
LCN1-201ENST00000263598 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
LCN1-201ENST00000263598 ISCA1Q9BUE6 129 aa11.66□□□□□ -0.54
LCN1-201ENST00000263598 GBA2Q9HCG7 927 aaPredicted RBP11.66□□□□□ -0.54
LCN1-201ENST00000263598 POLLQ9UGP5 575 aa11.66□□□□□ -0.54
LCN1-201ENST00000263598 G3V3G9 751 aa11.65□□□□□ -0.54
LCN1-201ENST00000263598 HSP90B1P14625 803 aaKnown RBP11.65□□□□□ -0.54
LCN1-201ENST00000263598 DOK7Q18PE1 504 aa11.65□□□□□ -0.54
LCN1-201ENST00000263598 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
LCN1-201ENST00000263598 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.54
LCN1-201ENST00000263598 CCDC146Q8IYE0 955 aa11.65□□□□□ -0.54
LCN1-201ENST00000263598 ZC3H12CQ9C0D7 883 aaKnown RBP11.65□□□□□ -0.54
LCN1-201ENST00000263598 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
LCN1-201ENST00000263598 SAGE1Q9NXZ1 904 aa11.65□□□□□ -0.54
LCN1-201ENST00000263598 LRRC37AA6NMS7 1700 aa11.65□□□□□ -0.54
LCN1-201ENST00000263598 IRS4O14654 1257 aaPredicted RBP11.64□□□□□ -0.55
LCN1-201ENST00000263598 ZNF157P51786 506 aaPredicted RBP11.64□□□□□ -0.55
LCN1-201ENST00000263598 RPS8P62241 208 aaKnown RBP11.64□□□□□ -0.55
LCN1-201ENST00000263598 TRIM28Q13263 835 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms