RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 SBF1O95248 1867 aa23.48■■□□□ 1.35
COPE-201ENST00000262812 GRIPAP1Q4V328 841 aa23.48■■□□□ 1.35
COPE-201ENST00000262812 GCKRQ14397 625 aa23.47■■□□□ 1.35
COPE-201ENST00000262812 UBE3BQ7Z3V4 1068 aa23.47■■□□□ 1.35
COPE-201ENST00000262812 LINS1Q8NG48 757 aa23.47■■□□□ 1.35
COPE-201ENST00000262812 SEC31BQ9NQW1 1179 aa23.47■■□□□ 1.35
COPE-201ENST00000262812 FER1L6Q2WGJ9 1857 aa23.47■■□□□ 1.35
COPE-201ENST00000262812 H7C1W4 665 aa23.46■■□□□ 1.35
COPE-201ENST00000262812 DPP8Q6V1X1 898 aaPredicted RBP23.46■■□□□ 1.35
COPE-201ENST00000262812 TRMT2AQ8IZ69 625 aaKnown RBP23.46■■□□□ 1.35
COPE-201ENST00000262812 MPNDQ8N594 471 aa23.46■■□□□ 1.35
COPE-201ENST00000262812 MRPL50Q8N5N7 158 aaKnown RBP23.46■■□□□ 1.35
COPE-201ENST00000262812 CDHR2Q9BYE9 1310 aa23.45■■□□□ 1.34
COPE-201ENST00000262812 DDNO94850 711 aaPredicted RBP23.45■■□□□ 1.34
COPE-201ENST00000262812 RPS8P62241 208 aaKnown RBP23.45■■□□□ 1.34
COPE-201ENST00000262812 CCDC152Q4G0S7 254 aa23.45■■□□□ 1.34
COPE-201ENST00000262812 SLC4A10Q6U841 1118 aa23.45■■□□□ 1.34
COPE-201ENST00000262812 C16orf71Q8IYS4 520 aaPredicted RBP23.45■■□□□ 1.34
COPE-201ENST00000262812 BCL2L13Q9BXK5 485 aa23.45■■□□□ 1.34
COPE-201ENST00000262812 BEND3Q5T5X7 828 aa23.44■■□□□ 1.34
COPE-201ENST00000262812 LARGE2Q8N3Y3 721 aa23.44■■□□□ 1.34
COPE-201ENST00000262812 JDP2Q8WYK2 163 aa23.44■■□□□ 1.34
COPE-201ENST00000262812 SSH1Q8WYL5 1049 aa23.44■■□□□ 1.34
COPE-201ENST00000262812 SNED1Q8TER0 1413 aa23.43■■□□□ 1.34
COPE-201ENST00000262812 TMC4Q7Z404 712 aa23.43■■□□□ 1.34
COPE-201ENST00000262812 CTSWP56202 376 aa23.42■■□□□ 1.34
COPE-201ENST00000262812 HNRNPUQ00839 825 aaKnown RBP eCLIP23.42■■□□□ 1.34
COPE-201ENST00000262812 NSFL1CQ9UNZ2 370 aaKnown RBP23.42■■□□□ 1.34
COPE-201ENST00000262812 DDX60Q8IY21 1712 aaKnown RBP23.42■■□□□ 1.34
COPE-201ENST00000262812 PPIP5K2O43314 1243 aa23.41■■□□□ 1.34
COPE-201ENST00000262812 TOMM70O94826 608 aa23.41■■□□□ 1.34
COPE-201ENST00000262812 VEGFAP15692 232 aaPredicted RBP23.41■■□□□ 1.34
COPE-201ENST00000262812 AOC3Q16853 763 aa23.41■■□□□ 1.34
COPE-201ENST00000262812 SUPT20HQ8NEM7 779 aa23.41■■□□□ 1.34
COPE-201ENST00000262812 TTLL11Q8NHH1 800 aa23.41■■□□□ 1.34
COPE-201ENST00000262812 LAMB2P55268 1798 aa23.4■■□□□ 1.34
COPE-201ENST00000262812 ZNF541Q9H0D2 1346 aa23.4■■□□□ 1.34
COPE-201ENST00000262812 CCDC88AQ3V6T2 1871 aa23.39■■□□□ 1.34
COPE-201ENST00000262812 POTECB2RU33 542 aa23.39■■□□□ 1.33
COPE-201ENST00000262812 FZD9O00144 591 aa23.39■■□□□ 1.33
COPE-201ENST00000262812 CASP7P55210 303 aa23.39■■□□□ 1.33
COPE-201ENST00000262812 GPSM2P81274 684 aa23.39■■□□□ 1.33
COPE-201ENST00000262812 RTFDC1Q9BY42 306 aaPredicted RBP23.39■■□□□ 1.33
COPE-201ENST00000262812 GREM2Q9H772 168 aa23.39■■□□□ 1.33
COPE-201ENST00000262812 SMC4Q9NTJ3 1288 aa23.39■■□□□ 1.33
COPE-201ENST00000262812 ANKRD18AQ8IVF6 992 aa23.38■■□□□ 1.33
COPE-201ENST00000262812 NIM1KQ8IY84 436 aa23.38■■□□□ 1.33
COPE-201ENST00000262812 SRCIN1Q9C0H9 1055 aa23.38■■□□□ 1.33
COPE-201ENST00000262812 C6orf229H3BNL8 230 aa23.37■■□□□ 1.33
COPE-201ENST00000262812 EIF6P56537 245 aaKnown RBP23.37■■□□□ 1.33
COPE-201ENST00000262812 ALDH1L2Q3SY69 923 aa23.37■■□□□ 1.33
COPE-201ENST00000262812 C9orf78Q9NZ63 289 aaPredicted RBP23.37■■□□□ 1.33
COPE-201ENST00000262812 GJA3Q9Y6H8 435 aa23.37■■□□□ 1.33
COPE-201ENST00000262812 TIAM2Q8IVF5 1701 aa23.36■■□□□ 1.33
COPE-201ENST00000262812 VPS33BQ9H267 617 aa23.36■■□□□ 1.33
COPE-201ENST00000262812 TAF1P21675 1872 aa23.36■■□□□ 1.33
COPE-201ENST00000262812 COL4A1P02462 1669 aa23.35■■□□□ 1.33
COPE-201ENST00000262812 RIMBP2O15034 1052 aa23.35■■□□□ 1.33
COPE-201ENST00000262812 CDC5LQ99459 802 aaKnown RBP23.35■■□□□ 1.33
COPE-201ENST00000262812 PLA2G12BQ9BX93 195 aa23.35■■□□□ 1.33
COPE-201ENST00000262812 ANKIB1Q9P2G1 1089 aa23.35■■□□□ 1.33
COPE-201ENST00000262812 POLLQ9UGP5 575 aa23.35■■□□□ 1.33
COPE-201ENST00000262812 PTPRCP08575 1304 aa23.34■■□□□ 1.33
COPE-201ENST00000262812 GRM8O00222 908 aa23.34■■□□□ 1.33
COPE-201ENST00000262812 ALDH1L1O75891 902 aa23.34■■□□□ 1.33
COPE-201ENST00000262812 WASHC4Q2M389 1173 aa23.34■■□□□ 1.33
COPE-201ENST00000262812 RBM46Q8TBY0 533 aaKnown RBP23.34■■□□□ 1.33
COPE-201ENST00000262812 GPR101Q96P66 508 aaPredicted RBP23.34■■□□□ 1.33
COPE-201ENST00000262812 COL4A5P29400 1685 aa23.33■■□□□ 1.33
COPE-201ENST00000262812 CT47B1P0C2W7 299 aaPredicted RBP23.33■■□□□ 1.33
COPE-201ENST00000262812 KIAA2012Q0VF49 1180 aa23.33■■□□□ 1.33
COPE-201ENST00000262812 ZNRF3Q9ULT6 936 aa23.33■■□□□ 1.33
COPE-201ENST00000262812 CHMP3Q9Y3E7 222 aa23.33■■□□□ 1.33
COPE-201ENST00000262812 CSF1RP07333 972 aa23.32■■□□□ 1.32
COPE-201ENST00000262812 ITGA6P23229 1130 aa23.32■■□□□ 1.32
COPE-201ENST00000262812 FOXO4P98177 505 aa23.32■■□□□ 1.32
COPE-201ENST00000262812 FAM161AQ3B820 660 aa23.32■■□□□ 1.32
COPE-201ENST00000262812 GPC2Q8N158 579 aa23.32■■□□□ 1.32
COPE-201ENST00000262812 TBC1D16Q8TBP0 767 aa23.32■■□□□ 1.32
COPE-201ENST00000262812 NOB1Q9ULX3 412 aaKnown RBP23.32■■□□□ 1.32
COPE-201ENST00000262812 EPHA10Q5JZY3 1008 aa23.31■■□□□ 1.32
COPE-201ENST00000262812 DICER1Q9UPY3 1922 aaKnown RBP23.31■■□□□ 1.32
COPE-201ENST00000262812 UFL1O94874 794 aa23.3■■□□□ 1.32
COPE-201ENST00000262812 IGHMBP2P38935 993 aaKnown RBP23.3■■□□□ 1.32
COPE-201ENST00000262812 RARSP54136 660 aaKnown RBP23.3■■□□□ 1.32
COPE-201ENST00000262812 L3MBTL3Q96JM7 780 aaPredicted RBP23.3■■□□□ 1.32
COPE-201ENST00000262812 EYA3Q99504 573 aa23.3■■□□□ 1.32
COPE-201ENST00000262812 BSDC1Q9NW68 430 aaPredicted RBP23.3■■□□□ 1.32
COPE-201ENST00000262812 GGA1Q9UJY5 639 aa23.3■■□□□ 1.32
COPE-201ENST00000262812 CACNA1FO60840 1977 aa23.3■■□□□ 1.32
COPE-201ENST00000262812 IQCA1LA6NCM1 817 aa23.29■■□□□ 1.32
COPE-201ENST00000262812 RAD17O75943 681 aa23.29■■□□□ 1.32
COPE-201ENST00000262812 CXCL9Q07325 125 aa23.29■■□□□ 1.32
COPE-201ENST00000262812 DOK7Q18PE1 504 aa23.29■■□□□ 1.32
COPE-201ENST00000262812 LMBR1LQ6UX01 489 aa23.29■■□□□ 1.32
COPE-201ENST00000262812 SMC1BQ8NDV3 1235 aa23.29■■□□□ 1.32
COPE-201ENST00000262812 ZC3H12CQ9C0D7 883 aaKnown RBP23.29■■□□□ 1.32
COPE-201ENST00000262812 PODXL2Q9NZ53 605 aa23.29■■□□□ 1.32
COPE-201ENST00000262812 MINPP1Q9UNW1 487 aa23.29■■□□□ 1.32
COPE-201ENST00000262812 RTL9Q8NET4 1388 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms