RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
TTC39A-201ENST00000262675 USP50Q70EL3 339 aaPredicted RBP12.09□□□□□ -0.47
TTC39A-201ENST00000262675 PLEKHF1Q96S99 279 aa12.09□□□□□ -0.47
TTC39A-201ENST00000262675 RRP7AQ9Y3A4 280 aaKnown RBP12.09□□□□□ -0.47
TTC39A-201ENST00000262675 PPEF1O14829 653 aaPredicted RBP12.08□□□□□ -0.48
TTC39A-201ENST00000262675 VEGFBP49765 207 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 NIM1KQ8IY84 436 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 LARGE2Q8N3Y3 721 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 RWDD1Q9H446 243 aaPredicted RBP12.08□□□□□ -0.48
TTC39A-201ENST00000262675 FOXN1O15353 648 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 ECE1P42892 770 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 ZKSCAN2Q63HK3 967 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
TTC39A-201ENST00000262675 CDHR2Q9BYE9 1310 aa12.07□□□□□ -0.48
TTC39A-201ENST00000262675 TRPM7Q96QT4 1865 aa12.07□□□□□ -0.48
TTC39A-201ENST00000262675 SLC10A5Q5PT55 438 aa12.07□□□□□ -0.48
TTC39A-201ENST00000262675 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
TTC39A-201ENST00000262675 NTSR2O95665 410 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 IGHDP01880 384 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 MYL6BP14649 208 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 TMPOP42166 694 aaKnown RBP12.06□□□□□ -0.48
TTC39A-201ENST00000262675 RGS3P49796 1198 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 SUSD4Q5VX71 490 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 TTLL7Q6ZT98 887 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 TMC4Q7Z404 712 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 PANK1Q8TE04 598 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 FRAT1Q92837 279 aaPredicted RBP12.06□□□□□ -0.48
TTC39A-201ENST00000262675 UTP14AQ9BVJ6 771 aaKnown RBP12.06□□□□□ -0.48
TTC39A-201ENST00000262675 ANKRD36CQ5JPF3 1778 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 UBN2Q6ZU65 1347 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 THSD7BQ9C0I4 1608 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 BBOX1O75936 387 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 ZBTB3Q9H5J0 574 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 DDX21Q9NR30 783 aaKnown RBP eCLIP12.06□□□□□ -0.48
TTC39A-201ENST00000262675 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 GJA3Q9Y6H8 435 aa12.06□□□□□ -0.48
TTC39A-201ENST00000262675 WDR33Q9C0J8 1336 aaKnown RBP12.05□□□□□ -0.48
TTC39A-201ENST00000262675 GPTP24298 496 aa12.05□□□□□ -0.48
TTC39A-201ENST00000262675 MVPQ14764 893 aaKnown RBP12.05□□□□□ -0.48
TTC39A-201ENST00000262675 MAP1SQ66K74 1059 aaPredicted RBP12.05□□□□□ -0.48
TTC39A-201ENST00000262675 ABT1Q9ULW3 272 aaKnown RBP12.05□□□□□ -0.48
TTC39A-201ENST00000262675 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
TTC39A-201ENST00000262675 RTFDC1Q9BY42 306 aaPredicted RBP12.05□□□□□ -0.48
TTC39A-201ENST00000262675 ADARB2Q9NS39 739 aaKnown RBP12.05□□□□□ -0.48
TTC39A-201ENST00000262675 PPIP5K2O43314 1243 aa12.04□□□□□ -0.48
TTC39A-201ENST00000262675 CALD1Q05682 793 aaKnown RBP12.04□□□□□ -0.48
TTC39A-201ENST00000262675 DZIP1LQ8IYY4 767 aaKnown RBP12.04□□□□□ -0.48
TTC39A-201ENST00000262675 IPO8O15397 1037 aaKnown RBP12.03□□□□□ -0.48
TTC39A-201ENST00000262675 SCNN1DP51172 638 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 SP8Q8IXZ3 490 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
TTC39A-201ENST00000262675 ZNRF3Q9ULT6 936 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 DDX19BQ9UMR2 479 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 TNIP1Q15025 636 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 ALDH1L2Q3SY69 923 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 SKAP1Q86WV1 359 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 FTSJ3Q8IY81 847 aaKnown RBP12.03□□□□□ -0.48
TTC39A-201ENST00000262675 HHIPL1Q96JK4 782 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 LTBP1Q14766 1721 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 KIF16BQ96L93 1317 aa12.03□□□□□ -0.48
TTC39A-201ENST00000262675 CA12O43570 354 aa12.02□□□□□ -0.48
TTC39A-201ENST00000262675 BRPF1P55201 1214 aaPredicted RBP12.02□□□□□ -0.48
TTC39A-201ENST00000262675 ZC3H15Q8WU90 426 aaKnown RBP12.02□□□□□ -0.48
TTC39A-201ENST00000262675 UPF2Q9HAU5 1272 aaKnown RBP12.02□□□□□ -0.48
TTC39A-201ENST00000262675 GPRC5DQ9NZD1 345 aa12.02□□□□□ -0.48
TTC39A-201ENST00000262675 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.48
TTC39A-201ENST00000262675 COL4A5P29400 1685 aa12.02□□□□□ -0.49
TTC39A-201ENST00000262675 MAP2K2P36507 400 aa12.02□□□□□ -0.49
TTC39A-201ENST00000262675 RIPK4P57078 832 aa12.02□□□□□ -0.49
TTC39A-201ENST00000262675 BECN1Q14457 450 aa12.02□□□□□ -0.49
TTC39A-201ENST00000262675 DPP8Q6V1X1 898 aaPredicted RBP12.02□□□□□ -0.49
TTC39A-201ENST00000262675 DDX46Q7L014 1031 aaKnown RBP12.02□□□□□ -0.49
TTC39A-201ENST00000262675 LAMB2P55268 1798 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 HSPA8P11142 646 aaKnown RBP12.01□□□□□ -0.49
TTC39A-201ENST00000262675 EPS15P42566 896 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 LBX1P52954 281 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 HDAC1Q13547 482 aaPredicted RBP12.01□□□□□ -0.49
TTC39A-201ENST00000262675 LRP10Q7Z4F1 713 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 MPNDQ8N594 471 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 CAPNS2Q96L46 248 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 ABCC4O15439 1325 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 HOXB7P09629 217 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 KIAA2012Q0VF49 1180 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 PDIA6Q15084 440 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 CIAPIN1Q6FI81 312 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 THUMPD2Q9BTF0 503 aaKnown RBP12.01□□□□□ -0.49
TTC39A-201ENST00000262675 PGAP2Q9UHJ9 254 aa12.01□□□□□ -0.49
TTC39A-201ENST00000262675 SH3TC1Q8TE82 1336 aa12□□□□□ -0.49
TTC39A-201ENST00000262675 RLBP1P12271 317 aa12□□□□□ -0.49
TTC39A-201ENST00000262675 EIF2S2P20042 333 aaKnown RBP12□□□□□ -0.49
TTC39A-201ENST00000262675 TCIRG1Q13488 830 aa12□□□□□ -0.49
TTC39A-201ENST00000262675 GRAPQ13588 217 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms