RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 FAM161AQ3B820 660 aa30.45■■■□□ 2.46
SCN1B-201ENST00000262631 GREM2Q9H772 168 aa30.45■■■□□ 2.46
SCN1B-201ENST00000262631 CHMP3Q9Y3E7 222 aa30.45■■■□□ 2.46
SCN1B-201ENST00000262631 SRGAP3O43295 1099 aa30.44■■■□□ 2.46
SCN1B-201ENST00000262631 SF3B3Q15393 1217 aaKnown RBP30.44■■■□□ 2.46
SCN1B-201ENST00000262631 ERICH6BQ5W0A0 696 aa30.44■■■□□ 2.46
SCN1B-201ENST00000262631 RPAP2Q8IXW5 612 aaPredicted RBP30.44■■■□□ 2.46
SCN1B-201ENST00000262631 C10orf71Q711Q0 1435 aa30.44■■■□□ 2.46
SCN1B-201ENST00000262631 ANKRD31Q8N7Z5 1873 aa30.43■■■□□ 2.46
SCN1B-201ENST00000262631 KLRG2A4D1S0 409 aaPredicted RBP30.42■■■□□ 2.46
SCN1B-201ENST00000262631 CRY2Q49AN0 593 aa30.42■■■□□ 2.46
SCN1B-201ENST00000262631 GTF3C3Q9Y5Q9 886 aa30.42■■■□□ 2.46
SCN1B-201ENST00000262631 CCDC152Q4G0S7 254 aa30.41■■■□□ 2.46
SCN1B-201ENST00000262631 SSH3Q8TE77 659 aa30.4■■■□□ 2.46
SCN1B-201ENST00000262631 SEC31BQ9NQW1 1179 aa30.4■■■□□ 2.46
SCN1B-201ENST00000262631 MYH3P11055 1940 aa30.4■■■□□ 2.46
SCN1B-201ENST00000262631 ITGA6P23229 1130 aa30.39■■■□□ 2.46
SCN1B-201ENST00000262631 POLA2Q14181 598 aa30.39■■■□□ 2.46
SCN1B-201ENST00000262631 RFX5P48382 616 aaPredicted RBP30.39■■■□□ 2.45
SCN1B-201ENST00000262631 KLHDC4Q8TBB5 520 aa30.39■■■□□ 2.45
SCN1B-201ENST00000262631 PDE6BP35913 854 aa30.38■■■□□ 2.45
SCN1B-201ENST00000262631 COL4A1P02462 1669 aa30.37■■■□□ 2.45
SCN1B-201ENST00000262631 RTL9Q8NET4 1388 aa30.37■■■□□ 2.45
SCN1B-201ENST00000262631 IGHDP01880 384 aa30.37■■■□□ 2.45
SCN1B-201ENST00000262631 IFIT5Q13325 482 aaKnown RBP30.36■■■□□ 2.45
SCN1B-201ENST00000262631 CCDC57Q2TAC2 916 aa30.36■■■□□ 2.45
SCN1B-201ENST00000262631 PA2G4Q9UQ80 394 aaKnown RBP30.36■■■□□ 2.45
SCN1B-201ENST00000262631 SRGNP10124 158 aa30.36■■■□□ 2.45
SCN1B-201ENST00000262631 ZNF594Q96JF6 807 aaPredicted RBP30.36■■■□□ 2.45
SCN1B-201ENST00000262631 CHRNA5P30532 468 aa30.35■■■□□ 2.45
SCN1B-201ENST00000262631 HDAC1Q13547 482 aaPredicted RBP30.35■■■□□ 2.45
SCN1B-201ENST00000262631 PPP1R1BQ9UD71 204 aaPredicted RBP30.35■■■□□ 2.45
SCN1B-201ENST00000262631 GOLGB1Q14789 3259 aaKnown RBP30.34■■■□□ 2.45
SCN1B-201ENST00000262631 PTPN12Q05209 780 aaKnown RBP30.34■■■□□ 2.45
SCN1B-201ENST00000262631 RPGRQ92834 1020 aaKnown RBP30.34■■■□□ 2.45
SCN1B-201ENST00000262631 PPP4R2Q9NY27 417 aa30.34■■■□□ 2.45
SCN1B-201ENST00000262631 COL11A2P13942 1736 aaPredicted RBP30.34■■■□□ 2.45
SCN1B-201ENST00000262631 ANKRD18BA2A2Z9 1011 aa30.33■■■□□ 2.45
SCN1B-201ENST00000262631 HMMRO75330 724 aa30.33■■■□□ 2.45
SCN1B-201ENST00000262631 C2CD5Q86YS7 1000 aa30.33■■■□□ 2.45
SCN1B-201ENST00000262631 B4GALNT3Q6L9W6 998 aa30.33■■■□□ 2.45
SCN1B-201ENST00000262631 HOXA10P31260 410 aaPredicted RBP30.32■■■□□ 2.44
SCN1B-201ENST00000262631 DDX46Q7L014 1031 aaKnown RBP30.32■■■□□ 2.44
SCN1B-201ENST00000262631 KLHL34Q8N239 644 aa30.32■■■□□ 2.44
SCN1B-201ENST00000262631 CELF1Q92879 486 aaKnown RBP30.32■■■□□ 2.44
SCN1B-201ENST00000262631 KIF13BQ9NQT8 1826 aa30.31■■■□□ 2.44
SCN1B-201ENST00000262631 H0YIN7 160 aa30.3■■■□□ 2.44
SCN1B-201ENST00000262631 CCDC136Q96JN2 1154 aa30.3■■■□□ 2.44
SCN1B-201ENST00000262631 SIL1Q9H173 461 aa30.3■■■□□ 2.44
SCN1B-201ENST00000262631 RWDD1Q9H446 243 aaPredicted RBP30.3■■■□□ 2.44
SCN1B-201ENST00000262631 COPRSQ9NQ92 184 aa30.3■■■□□ 2.44
SCN1B-201ENST00000262631 NPR1P16066 1061 aa30.3■■■□□ 2.44
SCN1B-201ENST00000262631 TAF1P21675 1872 aa30.29■■■□□ 2.44
SCN1B-201ENST00000262631 A0A0G2JLW4 131 aa30.29■■■□□ 2.44
SCN1B-201ENST00000262631 TAF7LQ5H9L4 462 aa30.29■■■□□ 2.44
SCN1B-201ENST00000262631 MASTLQ96GX5 879 aa30.29■■■□□ 2.44
SCN1B-201ENST00000262631 RBM17Q96I25 401 aaKnown RBP30.29■■■□□ 2.44
SCN1B-201ENST00000262631 EXOC6BQ9Y2D4 811 aa30.29■■■□□ 2.44
SCN1B-201ENST00000262631 CD2APQ9Y5K6 639 aa30.29■■■□□ 2.44
SCN1B-201ENST00000262631 CDC5LQ99459 802 aaKnown RBP30.28■■■□□ 2.44
SCN1B-201ENST00000262631 PUS3Q9BZE2 481 aaKnown RBP30.28■■■□□ 2.44
SCN1B-201ENST00000262631 SURF6O75683 361 aaKnown RBP30.27■■■□□ 2.44
SCN1B-201ENST00000262631 DPEP1P16444 411 aa30.27■■■□□ 2.44
SCN1B-201ENST00000262631 KCNA3P22001 575 aa30.27■■■□□ 2.44
SCN1B-201ENST00000262631 GRAPQ13588 217 aa30.27■■■□□ 2.44
SCN1B-201ENST00000262631 SLC51AQ86UW1 340 aa30.27■■■□□ 2.44
SCN1B-201ENST00000262631 GRAPLQ8TC17 118 aaPredicted RBP30.27■■■□□ 2.44
SCN1B-201ENST00000262631 ZNF622Q969S3 477 aaKnown RBP eCLIP30.27■■■□□ 2.44
SCN1B-201ENST00000262631 DCTPP1Q9H773 170 aa30.27■■■□□ 2.44
SCN1B-201ENST00000262631 LRRC24Q50LG9 513 aa30.27■■■□□ 2.44
SCN1B-201ENST00000262631 CRAMP1Q96RY5 1269 aa30.27■■■□□ 2.44
SCN1B-201ENST00000262631 NOP58Q9Y2X3 529 aaKnown RBP30.27■■■□□ 2.44
SCN1B-201ENST00000262631 TGFB2P61812 414 aa30.26■■■□□ 2.43
SCN1B-201ENST00000262631 RPS8P62241 208 aaKnown RBP30.26■■■□□ 2.43
SCN1B-201ENST00000262631 ANKRD18AQ8IVF6 992 aa30.26■■■□□ 2.43
SCN1B-201ENST00000262631 PDZRN3Q9UPQ7 1066 aa30.26■■■□□ 2.43
SCN1B-201ENST00000262631 LRP5O75197 1615 aa30.25■■■□□ 2.43
SCN1B-201ENST00000262631 STYK1Q6J9G0 422 aa30.25■■■□□ 2.43
SCN1B-201ENST00000262631 KIAA1551Q9HCM1 1747 aa30.25■■■□□ 2.43
SCN1B-201ENST00000262631 IGHMBP2P38935 993 aaKnown RBP30.24■■■□□ 2.43
SCN1B-201ENST00000262631 LDHAL6AQ6ZMR3 332 aa30.24■■■□□ 2.43
SCN1B-201ENST00000262631 ATG9AQ7Z3C6 839 aa30.24■■■□□ 2.43
SCN1B-201ENST00000262631 FHDC1Q9C0D6 1143 aaPredicted RBP30.24■■■□□ 2.43
SCN1B-201ENST00000262631 KDM2BQ8NHM5 1336 aa30.24■■■□□ 2.43
SCN1B-201ENST00000262631 NLGN2Q8NFZ4 835 aa30.23■■■□□ 2.43
SCN1B-201ENST00000262631 EYA2O00167 538 aa30.23■■■□□ 2.43
SCN1B-201ENST00000262631 MPHOSPH8Q99549 860 aa30.23■■■□□ 2.43
SCN1B-201ENST00000262631 APBB1O00213 710 aa30.22■■■□□ 2.43
SCN1B-201ENST00000262631 RIPOR2Q9Y4F9 1068 aa30.22■■■□□ 2.43
SCN1B-201ENST00000262631 ALDH1B1P30837 517 aa30.21■■■□□ 2.43
SCN1B-201ENST00000262631 SMC5Q8IY18 1101 aa30.21■■■□□ 2.43
SCN1B-201ENST00000262631 CNNM1Q9NRU3 951 aa30.21■■■□□ 2.43
SCN1B-201ENST00000262631 BSDC1Q9NW68 430 aaPredicted RBP30.21■■■□□ 2.43
SCN1B-201ENST00000262631 G3BP1Q13283 466 aaKnown RBP eCLIP30.2■■■□□ 2.43
SCN1B-201ENST00000262631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.2■■■□□ 2.43
SCN1B-201ENST00000262631 CIAO1O76071 339 aa30.2■■■□□ 2.42
SCN1B-201ENST00000262631 WWC3Q9ULE0 1092 aa30.2■■■□□ 2.42
SCN1B-201ENST00000262631 BBOX1O75936 387 aa30.19■■■□□ 2.42
SCN1B-201ENST00000262631 SASH1O94885 1247 aa30.19■■■□□ 2.42
SCN1B-201ENST00000262631 OS9Q13438 667 aaPredicted RBP30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms