RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SPATA31A7Q8IWB4 1347 aa16.39■□□□□ 0.21
VMP1-201ENST00000262291 RAB3GAP1Q15042 981 aa16.39■□□□□ 0.21
VMP1-201ENST00000262291 COL9A3Q14050 684 aaPredicted RBP16.39■□□□□ 0.21
VMP1-201ENST00000262291 GIGYF2Q6Y7W6 1299 aaKnown RBP16.39■□□□□ 0.21
VMP1-201ENST00000262291 PTF1AQ7RTS3 328 aa16.39■□□□□ 0.21
VMP1-201ENST00000262291 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.21
VMP1-201ENST00000262291 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
VMP1-201ENST00000262291 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.39■□□□□ 0.21
VMP1-201ENST00000262291 CCDC129Q6ZRS4 1044 aa16.38■□□□□ 0.21
VMP1-201ENST00000262291 ZNF589Q86UQ0 364 aaPredicted RBP16.38■□□□□ 0.21
VMP1-201ENST00000262291 XRCC6P12956 609 aaKnown RBP eCLIP16.38■□□□□ 0.218e-25■■■□□ 15.3
VMP1-201ENST00000262291 KCNJ4P48050 445 aa16.38■□□□□ 0.21
VMP1-201ENST00000262291 CCDC57Q2TAC2 916 aa16.38■□□□□ 0.21
VMP1-201ENST00000262291 ADCK5Q3MIX3 580 aa16.38■□□□□ 0.21
VMP1-201ENST00000262291 TAF7LQ5H9L4 462 aa16.38■□□□□ 0.21
VMP1-201ENST00000262291 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
VMP1-201ENST00000262291 RUFY2Q8WXA3 655 aa16.38■□□□□ 0.21
VMP1-201ENST00000262291 SEC62Q99442 399 aaKnown RBP16.38■□□□□ 0.21
VMP1-201ENST00000262291 EYA2O00167 538 aa16.37■□□□□ 0.21
VMP1-201ENST00000262291 ITPK1Q13572 414 aa16.37■□□□□ 0.21
VMP1-201ENST00000262291 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
VMP1-201ENST00000262291 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
VMP1-201ENST00000262291 TAF6LQ9Y6J9 622 aa16.37■□□□□ 0.21
VMP1-201ENST00000262291 COL15A1P39059 1388 aa16.36■□□□□ 0.21
VMP1-201ENST00000262291 ATP5JP18859 108 aa16.36■□□□□ 0.21
VMP1-201ENST00000262291 ADORA1P30542 326 aa16.36■□□□□ 0.21
VMP1-201ENST00000262291 ZBTB38Q8NAP3 1195 aaPredicted RBP16.36■□□□□ 0.21
VMP1-201ENST00000262291 GREM2Q9H772 168 aa16.36■□□□□ 0.21
VMP1-201ENST00000262291 SNRKQ9NRH2 765 aa16.36■□□□□ 0.21
VMP1-201ENST00000262291 CIZ1Q9ULV3 898 aaPredicted RBP16.36■□□□□ 0.21
VMP1-201ENST00000262291 LOC102724428A0A0B4J2F2 783 aa16.35■□□□□ 0.21
VMP1-201ENST00000262291 GOLIM4O00461 696 aa16.35■□□□□ 0.21
VMP1-201ENST00000262291 PCCAP05165 728 aaPredicted RBP16.35■□□□□ 0.21
VMP1-201ENST00000262291 CASTP20810 708 aaKnown RBP16.35■□□□□ 0.21
VMP1-201ENST00000262291 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
VMP1-201ENST00000262291 SIK1P57059 783 aa16.35■□□□□ 0.21
VMP1-201ENST00000262291 ANAPC15P60006 121 aa16.35■□□□□ 0.21
VMP1-201ENST00000262291 RBM8AQ9Y5S9 174 aaKnown RBP16.35■□□□□ 0.21
VMP1-201ENST00000262291 A0A1B0GUL7 405 aa16.35■□□□□ 0.21
VMP1-201ENST00000262291 INTS5Q6P9B9 1019 aaKnown RBP16.35■□□□□ 0.21
VMP1-201ENST00000262291 TCEANC2Q96MN5 208 aa16.35■□□□□ 0.21
VMP1-201ENST00000262291 JAKMIP1Q96N16 626 aaKnown RBP16.35■□□□□ 0.21
VMP1-201ENST00000262291 UBN2Q6ZU65 1347 aa16.35■□□□□ 0.21
VMP1-201ENST00000262291 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
VMP1-201ENST00000262291 CCDC171Q6TFL3 1326 aa16.34■□□□□ 0.21
VMP1-201ENST00000262291 IL15P40933 162 aaPredicted RBP16.34■□□□□ 0.21
VMP1-201ENST00000262291 IRS4O14654 1257 aaPredicted RBP16.34■□□□□ 0.21
VMP1-201ENST00000262291 TRAK2O60296 914 aa16.34■□□□□ 0.21
VMP1-201ENST00000262291 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
VMP1-201ENST00000262291 THRAP3Q9Y2W1 955 aaKnown RBP16.34■□□□□ 0.21
VMP1-201ENST00000262291 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.21
VMP1-201ENST00000262291 FOXD4L6Q3SYB3 417 aaPredicted RBP16.33■□□□□ 0.21
VMP1-201ENST00000262291 FOXD4L3Q6VB84 417 aaPredicted RBP16.33■□□□□ 0.21
VMP1-201ENST00000262291 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.21
VMP1-201ENST00000262291 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.21
VMP1-201ENST00000262291 CLCN1P35523 988 aa16.33■□□□□ 0.2
VMP1-201ENST00000262291 AK2P54819 239 aa16.33■□□□□ 0.2
VMP1-201ENST00000262291 WNK3Q9BYP7 1800 aa16.33■□□□□ 0.2
VMP1-201ENST00000262291 ITGA6P23229 1130 aa16.32■□□□□ 0.2
VMP1-201ENST00000262291 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
VMP1-201ENST00000262291 CCDC87Q9NVE4 849 aa16.32■□□□□ 0.2
VMP1-201ENST00000262291 CREB3L3Q68CJ9 461 aa16.32■□□□□ 0.2
VMP1-201ENST00000262291 TTLL11Q8NHH1 800 aa16.32■□□□□ 0.2
VMP1-201ENST00000262291 HAUS7Q99871 368 aa16.32■□□□□ 0.2
VMP1-201ENST00000262291 IL6STP40189 918 aaPredicted RBP16.32■□□□□ 0.2
VMP1-201ENST00000262291 FKBP4Q02790 459 aaKnown RBP eCLIP16.32■□□□□ 0.2
VMP1-201ENST00000262291 PI16Q6UXB8 463 aa16.32■□□□□ 0.2
VMP1-201ENST00000262291 HELBQ8NG08 1087 aaPredicted RBP16.32■□□□□ 0.2
VMP1-201ENST00000262291 ZDHHC9Q9Y397 364 aa16.32■□□□□ 0.2
VMP1-201ENST00000262291 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 LRP6O75581 1613 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 LARGE1O95461 756 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 SLIT2O94813 1529 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 GOLGA6L3A6NEY3 463 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 NECTIN1Q15223 517 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 SUSD4Q5VX71 490 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 GBP4Q96PP9 640 aa16.31■□□□□ 0.2
VMP1-201ENST00000262291 ZNF609O15014 1411 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 SNAP23O00161 211 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
VMP1-201ENST00000262291 EIF5P55010 431 aaKnown RBP16.3■□□□□ 0.2
VMP1-201ENST00000262291 CTSWP56202 376 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 MCTP1Q6DN14 999 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 LDHAL6AQ6ZMR3 332 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 PAG1Q9NWQ8 432 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 HIP1O00291 1037 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 SLC27A2O14975 620 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 BAG4O95429 457 aaKnown RBP16.3■□□□□ 0.2
VMP1-201ENST00000262291 SCARF1Q14162 830 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 METTL24Q5JXM2 366 aa16.3■□□□□ 0.2
VMP1-201ENST00000262291 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
VMP1-201ENST00000262291 CSF1RP07333 972 aa16.29■□□□□ 0.2
VMP1-201ENST00000262291 BARGINQ6ZT62 677 aa16.29■□□□□ 0.2
VMP1-201ENST00000262291 MAP4K1Q92918 833 aa16.29■□□□□ 0.2
VMP1-201ENST00000262291 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
VMP1-201ENST00000262291 TTC14Q96N46 770 aa16.29■□□□□ 0.2
VMP1-201ENST00000262291 CNNM1Q9NRU3 951 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms