RNA–Protein interactions for RNA: ENST00000261884.7

TRIP4-201, Transcript of thyroid hormone receptor interactor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP4, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-201ENST00000261884 SYNE4Q8N205 404 aa23.26■■□□□ 1.31
TRIP4-201ENST00000261884 LNPKQ9C0E8 428 aa23.26■■□□□ 1.31
TRIP4-201ENST00000261884 CHMP3Q9Y3E7 222 aa23.26■■□□□ 1.31
TRIP4-201ENST00000261884 COL24A1Q17RW2 1714 aa23.26■■□□□ 1.31
TRIP4-201ENST00000261884 CARMIL3Q8ND23 1372 aa23.25■■□□□ 1.31
TRIP4-201ENST00000261884 CSF1RP07333 972 aa23.25■■□□□ 1.31
TRIP4-201ENST00000261884 COPRSQ9NQ92 184 aa23.25■■□□□ 1.31
TRIP4-201ENST00000261884 CTSWP56202 376 aa23.25■■□□□ 1.31
TRIP4-201ENST00000261884 SLC15A2Q16348 729 aa23.25■■□□□ 1.31
TRIP4-201ENST00000261884 LRRCC1Q9C099 1032 aa23.25■■□□□ 1.31
TRIP4-201ENST00000261884 RFX5P48382 616 aaPredicted RBP23.24■■□□□ 1.31
TRIP4-201ENST00000261884 TPTE2Q6XPS3 522 aa23.24■■□□□ 1.31
TRIP4-201ENST00000261884 NBPF5PQ86XG9 351 aaPredicted RBP23.24■■□□□ 1.31
TRIP4-201ENST00000261884 STK32BQ9NY57 414 aa23.24■■□□□ 1.31
TRIP4-201ENST00000261884 COL23A1Q86Y22 540 aaPredicted RBP23.23■■□□□ 1.31
TRIP4-201ENST00000261884 ERC1Q8IUD2 1116 aa23.23■■□□□ 1.31
TRIP4-201ENST00000261884 APBB1O00213 710 aa23.23■■□□□ 1.31
TRIP4-201ENST00000261884 GTF2E1P29083 439 aaPredicted RBP23.23■■□□□ 1.31
TRIP4-201ENST00000261884 NFIXQ14938 502 aa23.23■■□□□ 1.31
TRIP4-201ENST00000261884 NUTM1Q86Y26 1132 aa23.23■■□□□ 1.31
TRIP4-201ENST00000261884 TTLL11Q8NHH1 800 aa23.23■■□□□ 1.31
TRIP4-201ENST00000261884 KIF1BPQ96EK5 621 aa23.23■■□□□ 1.31
TRIP4-201ENST00000261884 PNPLA7Q6ZV29 1317 aa23.22■■□□□ 1.31
TRIP4-201ENST00000261884 PTPN12Q05209 780 aaKnown RBP23.22■■□□□ 1.31
TRIP4-201ENST00000261884 OS9Q13438 667 aaPredicted RBP23.22■■□□□ 1.31
TRIP4-201ENST00000261884 CCDC57Q2TAC2 916 aa23.22■■□□□ 1.31
TRIP4-201ENST00000261884 FAM43AQ8N2R8 423 aa23.22■■□□□ 1.31
TRIP4-201ENST00000261884 PA2G4Q9UQ80 394 aaKnown RBP23.22■■□□□ 1.31
TRIP4-201ENST00000261884 TUBGCP6Q96RT7 1819 aa23.22■■□□□ 1.31
TRIP4-201ENST00000261884 G3BP1Q13283 466 aaKnown RBP eCLIP23.21■■□□□ 1.31
TRIP4-201ENST00000261884 NLGN1Q8N2Q7 840 aa23.21■■□□□ 1.31
TRIP4-201ENST00000261884 MYH3P11055 1940 aa23.21■■□□□ 1.31
TRIP4-201ENST00000261884 HCLS1P14317 486 aaPredicted RBP23.2■■□□□ 1.3
TRIP4-201ENST00000261884 IFIT5Q13325 482 aaKnown RBP23.2■■□□□ 1.3
TRIP4-201ENST00000261884 LAMB2P55268 1798 aa23.2■■□□□ 1.3
TRIP4-201ENST00000261884 ERFEQ4G0M1 354 aa23.2■■□□□ 1.3
TRIP4-201ENST00000261884 SLC10A5Q5PT55 438 aa23.2■■□□□ 1.3
TRIP4-201ENST00000261884 KLHDC4Q8TBB5 520 aa23.2■■□□□ 1.3
TRIP4-201ENST00000261884 RHPN1Q8TCX5 695 aa23.2■■□□□ 1.3
TRIP4-201ENST00000261884 TM4SF1P30408 202 aa23.19■■□□□ 1.3
TRIP4-201ENST00000261884 FBXO3Q9UK99 471 aa23.18■■□□□ 1.3
TRIP4-201ENST00000261884 DDX60Q8IY21 1712 aaKnown RBP23.18■■□□□ 1.3
TRIP4-201ENST00000261884 NPHP1O15259 732 aa23.18■■□□□ 1.3
TRIP4-201ENST00000261884 CCDC152Q4G0S7 254 aa23.18■■□□□ 1.3
TRIP4-201ENST00000261884 SIL1Q9H173 461 aa23.18■■□□□ 1.3
TRIP4-201ENST00000261884 GREM2Q9H772 168 aa23.18■■□□□ 1.3
TRIP4-201ENST00000261884 QSER1Q2KHR3 1735 aa23.17■■□□□ 1.3
TRIP4-201ENST00000261884 SMARCA5O60264 1052 aaPredicted RBP23.17■■□□□ 1.3
TRIP4-201ENST00000261884 ITGA6P23229 1130 aa23.17■■□□□ 1.3
TRIP4-201ENST00000261884 CNBD1Q8NA66 436 aa23.17■■□□□ 1.3
TRIP4-201ENST00000261884 RTL9Q8NET4 1388 aa23.17■■□□□ 1.3
TRIP4-201ENST00000261884 ANKRD18BA2A2Z9 1011 aa23.16■■□□□ 1.3
TRIP4-201ENST00000261884 CCDC85AQ96PX6 553 aaPredicted RBP23.16■■□□□ 1.3
TRIP4-201ENST00000261884 ABCC12Q96J65 1359 aa23.16■■□□□ 1.3
TRIP4-201ENST00000261884 CIAO1O76071 339 aa23.15■■□□□ 1.3
TRIP4-201ENST00000261884 TAF7LQ5H9L4 462 aa23.15■■□□□ 1.3
TRIP4-201ENST00000261884 C22orf23Q9BZE7 217 aa23.15■■□□□ 1.3
TRIP4-201ENST00000261884 SF3B3Q15393 1217 aaKnown RBP23.15■■□□□ 1.3
TRIP4-201ENST00000261884 CLASRPQ8N2M8 674 aaKnown RBP23.15■■□□□ 1.3
TRIP4-201ENST00000261884 EYA2O00167 538 aa23.14■■□□□ 1.29
TRIP4-201ENST00000261884 SERPINB2P05120 415 aa23.14■■□□□ 1.29
TRIP4-201ENST00000261884 IL15P40933 162 aaPredicted RBP23.14■■□□□ 1.29
TRIP4-201ENST00000261884 NLRP3Q96P20 1036 aa23.14■■□□□ 1.29
TRIP4-201ENST00000261884 IL1RAPL2Q9NP60 686 aa23.14■■□□□ 1.29
TRIP4-201ENST00000261884 SASH1O94885 1247 aa23.13■■□□□ 1.29
TRIP4-201ENST00000261884 L1TD1Q5T7N2 865 aaKnown RBP23.13■■□□□ 1.29
TRIP4-201ENST00000261884 POLRMTO00411 1230 aaKnown RBP23.13■■□□□ 1.29
TRIP4-201ENST00000261884 RIC1Q4ADV7 1423 aa23.13■■□□□ 1.29
TRIP4-201ENST00000261884 ST5P78524 1137 aa23.12■■□□□ 1.29
TRIP4-201ENST00000261884 DDR1Q08345 913 aa23.12■■□□□ 1.29
TRIP4-201ENST00000261884 PRR5LQ6MZQ0 368 aa23.12■■□□□ 1.29
TRIP4-201ENST00000261884 C16orf71Q8IYS4 520 aaPredicted RBP23.12■■□□□ 1.29
TRIP4-201ENST00000261884 ZNF594Q96JF6 807 aaPredicted RBP23.12■■□□□ 1.29
TRIP4-201ENST00000261884 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.12■■□□□ 1.29
TRIP4-201ENST00000261884 MCM4P33991 863 aa23.11■■□□□ 1.29
TRIP4-201ENST00000261884 PLEKHM2Q8IWE5 1019 aa23.11■■□□□ 1.29
TRIP4-201ENST00000261884 UPF1Q92900 1129 aaKnown RBP eCLIP23.11■■□□□ 1.29
TRIP4-201ENST00000261884 ATG9AQ7Z3C6 839 aa23.11■■□□□ 1.29
TRIP4-201ENST00000261884 FSD2A1L4K1 749 aa23.1■■□□□ 1.29
TRIP4-201ENST00000261884 MFAP1P55081 439 aaKnown RBP23.09■■□□□ 1.29
TRIP4-201ENST00000261884 LDHAL6AQ6ZMR3 332 aa23.09■■□□□ 1.29
TRIP4-201ENST00000261884 CHMP5Q9NZZ3 219 aa23.09■■□□□ 1.29
TRIP4-201ENST00000261884 SALL3Q9BXA9 1300 aa23.09■■□□□ 1.29
TRIP4-201ENST00000261884 OTUD7AQ8TE49 926 aaPredicted RBP23.09■■□□□ 1.29
TRIP4-201ENST00000261884 CDC5LQ99459 802 aaKnown RBP23.09■■□□□ 1.29
TRIP4-201ENST00000261884 OSBPL3Q9H4L5 887 aa23.09■■□□□ 1.29
TRIP4-201ENST00000261884 MX1P20591 662 aa23.08■■□□□ 1.29
TRIP4-201ENST00000261884 LRRC24Q50LG9 513 aa23.08■■□□□ 1.29
TRIP4-201ENST00000261884 C3orf67Q6ZVT6 689 aa23.08■■□□□ 1.29
TRIP4-201ENST00000261884 LRP5O75197 1615 aa23.08■■□□□ 1.29
TRIP4-201ENST00000261884 MMP10P09238 476 aa23.08■■□□□ 1.28
TRIP4-201ENST00000261884 IGHMBP2P38935 993 aaKnown RBP23.07■■□□□ 1.28
TRIP4-201ENST00000261884 PDE1AP54750 535 aa23.07■■□□□ 1.28
TRIP4-201ENST00000261884 TFCP2Q12800 502 aa23.07■■□□□ 1.28
TRIP4-201ENST00000261884 CCDC24Q8N4L8 307 aa23.07■■□□□ 1.28
TRIP4-201ENST00000261884 MPHOSPH8Q99549 860 aa23.07■■□□□ 1.28
TRIP4-201ENST00000261884 PUS3Q9BZE2 481 aaKnown RBP23.07■■□□□ 1.28
TRIP4-201ENST00000261884 SEC31BQ9NQW1 1179 aa23.07■■□□□ 1.28
TRIP4-201ENST00000261884 CNNM1Q9NRU3 951 aa23.07■■□□□ 1.28
TRIP4-201ENST00000261884 PARP3Q9Y6F1 533 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms