RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PRDM10Q9NQV6 1147 aa17.21■□□□□ 0.35
SFSWAP-201ENST00000261674 LETM1O95202 739 aaPredicted RBP17.21■□□□□ 0.35
SFSWAP-201ENST00000261674 UVSSAQ2YD98 709 aa17.21■□□□□ 0.35
SFSWAP-201ENST00000261674 BLOC1S2Q6QNY1 142 aa17.21■□□□□ 0.35
SFSWAP-201ENST00000261674 EVI5LQ96CN4 794 aa17.21■□□□□ 0.35
SFSWAP-201ENST00000261674 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
SFSWAP-201ENST00000261674 TAOK2Q9UL54 1235 aa17.21■□□□□ 0.35
SFSWAP-201ENST00000261674 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.35
SFSWAP-201ENST00000261674 DYNC1I1O14576 645 aa17.21■□□□□ 0.34
SFSWAP-201ENST00000261674 TERF1P54274 439 aa17.21■□□□□ 0.34
SFSWAP-201ENST00000261674 VPS53Q5VIR6 699 aa17.21■□□□□ 0.34
SFSWAP-201ENST00000261674 TTC41PQ6P2S7 1318 aa17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 KRT85P78386 507 aa17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 DDX11Q96FC9 970 aa17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 CARD10Q9BWT7 1032 aa17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 A0A0D9SFI3 127 aa17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 EXOC5O00471 708 aa17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 LIG1P18858 919 aa17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 ZSCAN31Q96LW9 406 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
SFSWAP-201ENST00000261674 CCDC192P0DO97 292 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 KSR2Q6VAB6 950 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 LUZP1Q86V48 1076 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 ZSWIM6Q9HCJ5 1215 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 AP5Z1O43299 807 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 SH2B1Q9NRF2 756 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 USP21Q9UK80 565 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 ADCY9O60503 1353 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 COL5A2P05997 1499 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 SASH1O94885 1247 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 CHGBP05060 677 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
SFSWAP-201ENST00000261674 CPDO75976 1380 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 DACT1Q9NYF0 836 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 GRM8O00222 908 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 SLC27A2O14975 620 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 NECTIN1Q15223 517 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 TMEM87AQ8NBN3 555 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 NUP62CLQ9H1M0 184 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 ASAP1Q9ULH1 1129 aa17.18■□□□□ 0.34
SFSWAP-201ENST00000261674 ST3GAL1Q11201 340 aa17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 GIGYF1O75420 1035 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 PTF1AQ7RTS3 328 aa17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 SPATA32Q96LK8 384 aa17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 TNMDQ9H2S6 317 aa17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 PYCARDQ9ULZ3 195 aa17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 PSMA5P28066 241 aa17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 FBXW7Q969H0 707 aa17.17■□□□□ 0.34
SFSWAP-201ENST00000261674 MAP3K11Q16584 847 aa17.16■□□□□ 0.34
SFSWAP-201ENST00000261674 RNF20Q5VTR2 975 aa17.16■□□□□ 0.34
SFSWAP-201ENST00000261674 SMIM5Q71RC9 77 aa17.16■□□□□ 0.34
SFSWAP-201ENST00000261674 CHMP4AQ9BY43 222 aa17.16■□□□□ 0.34
SFSWAP-201ENST00000261674 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
SFSWAP-201ENST00000261674 KCNQ2O43526 872 aa17.16■□□□□ 0.34
SFSWAP-201ENST00000261674 DDB1Q16531 1140 aa17.16■□□□□ 0.34
SFSWAP-201ENST00000261674 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
SFSWAP-201ENST00000261674 ZNF589Q86UQ0 364 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-201ENST00000261674 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
SFSWAP-201ENST00000261674 MAP7D2Q96T17 732 aa17.15■□□□□ 0.34
SFSWAP-201ENST00000261674 TRIM5Q9C035 493 aa17.15■□□□□ 0.34
SFSWAP-201ENST00000261674 H3BQV1 296 aa17.15■□□□□ 0.34
SFSWAP-201ENST00000261674 JAK2O60674 1132 aa17.15■□□□□ 0.34
SFSWAP-201ENST00000261674 DDX58O95786 925 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-201ENST00000261674 IFFO2Q5TF58 517 aa17.15■□□□□ 0.34
SFSWAP-201ENST00000261674 MYD88Q99836 296 aa17.15■□□□□ 0.34
SFSWAP-201ENST00000261674 PTGS1P23219 599 aa17.15■□□□□ 0.34
SFSWAP-201ENST00000261674 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
SFSWAP-201ENST00000261674 ANO6Q4KMQ2 910 aa17.14■□□□□ 0.33
SFSWAP-201ENST00000261674 MYRIPQ8NFW9 859 aa17.14■□□□□ 0.33
SFSWAP-201ENST00000261674 MAP4K1Q92918 833 aa17.14■□□□□ 0.33
SFSWAP-201ENST00000261674 DCAF5Q96JK2 942 aa17.14■□□□□ 0.33
SFSWAP-201ENST00000261674 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-201ENST00000261674 ALDH1L1O75891 902 aa17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 TYRO3Q06418 890 aa17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 CHAF1AQ13111 956 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 LINS1Q8NG48 757 aa17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 ATP5J2-PTCD1G3V325 749 aa17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 PDCP20941 246 aa17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 TMOD3Q9NYL9 352 aa17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 PHRF1Q9P1Y6 1649 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-201ENST00000261674 PHLPP1O60346 1717 aa17.12■□□□□ 0.33
SFSWAP-201ENST00000261674 RGPD1P0DJD0 1748 aa17.12■□□□□ 0.33
SFSWAP-201ENST00000261674 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
SFSWAP-201ENST00000261674 A1BGP04217 495 aa17.12■□□□□ 0.33
SFSWAP-201ENST00000261674 COPS6Q7L5N1 327 aa17.12■□□□□ 0.33
SFSWAP-201ENST00000261674 CCDC186Q7Z3E2 898 aa17.12■□□□□ 0.33
SFSWAP-201ENST00000261674 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
SFSWAP-201ENST00000261674 TM6SF1Q9BZW5 370 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms