RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 KCNQ3O43525 872 aa16.4■□□□□ 0.22
LIMD2-201ENST00000259006 CCDC172P0C7W6 258 aa16.4■□□□□ 0.22
LIMD2-201ENST00000259006 LARP1Q6PKG0 1096 aaKnown RBP16.4■□□□□ 0.22
LIMD2-201ENST00000259006 LRRC2Q9BYS8 371 aa16.4■□□□□ 0.22
LIMD2-201ENST00000259006 NR1I2O75469 434 aa16.4■□□□□ 0.22
LIMD2-201ENST00000259006 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
LIMD2-201ENST00000259006 GTF3C6Q969F1 213 aa16.4■□□□□ 0.22
LIMD2-201ENST00000259006 ATP7BP35670 1465 aa16.39■□□□□ 0.22
LIMD2-201ENST00000259006 ZKSCAN1P17029 563 aaPredicted RBP16.39■□□□□ 0.21
LIMD2-201ENST00000259006 LMOD2Q6P5Q4 547 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 SSH3Q8TE77 659 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
LIMD2-201ENST00000259006 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 EDC3Q96F86 508 aaKnown RBP16.39■□□□□ 0.21
LIMD2-201ENST00000259006 BOLA2Q9H3K6 86 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 RBM8AQ9Y5S9 174 aaKnown RBP16.39■□□□□ 0.21
LIMD2-201ENST00000259006 PTPRUQ92729 1446 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 CYP2C19P33261 490 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 ZNF165P49910 485 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 AACSQ86V21 672 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 LCMT1Q9UIC8 334 aa16.39■□□□□ 0.21
LIMD2-201ENST00000259006 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 CCDC144BQ3MJ40 725 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 UBR1Q8IWV7 1749 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 CCDC144CPQ8IYA2 1237 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 CLASRPQ8N2M8 674 aaKnown RBP16.38■□□□□ 0.21
LIMD2-201ENST00000259006 CACTINQ8WUQ7 758 aaKnown RBP16.38■□□□□ 0.21
LIMD2-201ENST00000259006 USP27XA6NNY8 438 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 JAK2O60674 1132 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 CCDC112Q8NEF3 446 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 KLHDC4Q8TBB5 520 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 MYO1CO00159 1063 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 CHGBP05060 677 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 NLRP6P59044 892 aa16.38■□□□□ 0.21
LIMD2-201ENST00000259006 C9orf78Q9NZ63 289 aaPredicted RBP16.38■□□□□ 0.21
LIMD2-201ENST00000259006 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.38■□□□□ 0.21
LIMD2-201ENST00000259006 CASQ1P31415 396 aa16.37■□□□□ 0.21
LIMD2-201ENST00000259006 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
LIMD2-201ENST00000259006 E2F4Q16254 413 aa16.37■□□□□ 0.21
LIMD2-201ENST00000259006 FTOQ9C0B1 505 aaKnown RBP eCLIP16.37■□□□□ 0.21
LIMD2-201ENST00000259006 ZSCAN25Q6NSZ9 544 aa16.37■□□□□ 0.21
LIMD2-201ENST00000259006 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
LIMD2-201ENST00000259006 KMT5BQ4FZB7 885 aa16.36■□□□□ 0.21
LIMD2-201ENST00000259006 GRIPAP1Q4V328 841 aa16.36■□□□□ 0.21
LIMD2-201ENST00000259006 KRBA2Q6ZNG9 492 aa16.36■□□□□ 0.21
LIMD2-201ENST00000259006 GUCY2CP25092 1073 aa16.36■□□□□ 0.21
LIMD2-201ENST00000259006 CREB3L3Q68CJ9 461 aa16.36■□□□□ 0.21
LIMD2-201ENST00000259006 ZNF446Q9NWS9 450 aa16.36■□□□□ 0.21
LIMD2-201ENST00000259006 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
LIMD2-201ENST00000259006 NMIQ13287 307 aaPredicted RBP16.36■□□□□ 0.21
LIMD2-201ENST00000259006 NFATC2IPQ8NCF5 419 aa16.35■□□□□ 0.21
LIMD2-201ENST00000259006 SSH2Q76I76 1423 aa16.35■□□□□ 0.21
LIMD2-201ENST00000259006 GOLIM4O00461 696 aa16.35■□□□□ 0.21
LIMD2-201ENST00000259006 GLRX3O76003 335 aaKnown RBP16.35■□□□□ 0.21
LIMD2-201ENST00000259006 GUCY1B3Q02153 619 aa16.35■□□□□ 0.21
LIMD2-201ENST00000259006 RUFY2Q8WXA3 655 aa16.35■□□□□ 0.21
LIMD2-201ENST00000259006 LGR6Q9HBX8 967 aa16.35■□□□□ 0.21
LIMD2-201ENST00000259006 IRF6O14896 467 aa16.34■□□□□ 0.21
LIMD2-201ENST00000259006 POLR3GO15318 223 aaPredicted RBP16.34■□□□□ 0.21
LIMD2-201ENST00000259006 ZNF75DP51815 510 aa16.34■□□□□ 0.21
LIMD2-201ENST00000259006 VPS53Q5VIR6 699 aa16.34■□□□□ 0.21
LIMD2-201ENST00000259006 FSD1Q9BTV5 496 aa16.34■□□□□ 0.21
LIMD2-201ENST00000259006 TLR7Q9NYK1 1049 aaKnown RBP16.34■□□□□ 0.21
LIMD2-201ENST00000259006 GOLGA6L19H0YKK7 550 aa16.34■□□□□ 0.21
LIMD2-201ENST00000259006 BLOC1S2Q6QNY1 142 aa16.34■□□□□ 0.21
LIMD2-201ENST00000259006 CCDC191Q8NCU4 936 aa16.34■□□□□ 0.21
LIMD2-201ENST00000259006 FMNL2Q96PY5 1086 aa16.34■□□□□ 0.21
LIMD2-201ENST00000259006 JRKLQ9Y4A0 524 aa16.34■□□□□ 0.21
LIMD2-201ENST00000259006 NRXN3Q9Y4C0 1643 aa16.33■□□□□ 0.21
LIMD2-201ENST00000259006 H3BQV1 296 aa16.33■□□□□ 0.21
LIMD2-201ENST00000259006 IFFO2Q5TF58 517 aa16.33■□□□□ 0.21
LIMD2-201ENST00000259006 CTR9Q6PD62 1173 aa16.33■□□□□ 0.21
LIMD2-201ENST00000259006 ESCO1Q5FWF5 840 aa16.33■□□□□ 0.2
LIMD2-201ENST00000259006 PROSER2Q86WR7 435 aaPredicted RBP16.33■□□□□ 0.2
LIMD2-201ENST00000259006 LEO1Q8WVC0 666 aaPredicted RBP16.33■□□□□ 0.2
LIMD2-201ENST00000259006 DNAAF4Q8WXU2 420 aa16.33■□□□□ 0.2
LIMD2-201ENST00000259006 ZSWIM6Q9HCJ5 1215 aa16.33■□□□□ 0.2
LIMD2-201ENST00000259006 ECHDC1Q9NTX5 307 aa16.33■□□□□ 0.2
LIMD2-201ENST00000259006 A0A0D9SFI3 127 aa16.32■□□□□ 0.2
LIMD2-201ENST00000259006 RBM6P78332 1123 aaKnown RBP16.32■□□□□ 0.2
LIMD2-201ENST00000259006 CEP135Q66GS9 1140 aa16.32■□□□□ 0.2
LIMD2-201ENST00000259006 ZNF397Q8NF99 534 aaPredicted RBP16.32■□□□□ 0.2
LIMD2-201ENST00000259006 PGBD1Q96JS3 809 aa16.32■□□□□ 0.2
LIMD2-201ENST00000259006 ZNF215Q9UL58 517 aaPredicted RBP16.32■□□□□ 0.2
LIMD2-201ENST00000259006 TDO2P48775 406 aa16.32■□□□□ 0.2
LIMD2-201ENST00000259006 BECN2A8MW95 431 aa16.32■□□□□ 0.2
LIMD2-201ENST00000259006 TPM3P06753 285 aa16.32■□□□□ 0.2
LIMD2-201ENST00000259006 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
LIMD2-201ENST00000259006 ZSCAN31Q96LW9 406 aaPredicted RBP16.32■□□□□ 0.2
LIMD2-201ENST00000259006 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.32■□□□□ 0.2
LIMD2-201ENST00000259006 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
LIMD2-201ENST00000259006 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
LIMD2-201ENST00000259006 SLC27A2O14975 620 aa16.31■□□□□ 0.2
LIMD2-201ENST00000259006 SATB1Q01826 763 aa16.31■□□□□ 0.2
LIMD2-201ENST00000259006 C11orf57Q6ZUT1 292 aaPredicted RBP16.31■□□□□ 0.2
LIMD2-201ENST00000259006 RNF217Q8TC41 542 aa16.31■□□□□ 0.2
LIMD2-201ENST00000259006 SH2B1Q9NRF2 756 aaPredicted RBP16.31■□□□□ 0.2
LIMD2-201ENST00000259006 FBXO38Q6PIJ6 1188 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms