RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 NFAT5O94916 1531 aa17.42■□□□□ 0.38
MSI1-201ENST00000257552 ZSWIM6Q9HCJ5 1215 aa17.42■□□□□ 0.38
MSI1-201ENST00000257552 A0A087WWV3 80 aa17.41■□□□□ 0.38
MSI1-201ENST00000257552 ELF2Q15723 593 aa17.41■□□□□ 0.38
MSI1-201ENST00000257552 KIF1BPQ96EK5 621 aa17.41■□□□□ 0.38
MSI1-201ENST00000257552 PTPN14Q15678 1187 aa17.41■□□□□ 0.38
MSI1-201ENST00000257552 LARP1Q6PKG0 1096 aaKnown RBP17.41■□□□□ 0.38
MSI1-201ENST00000257552 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
MSI1-201ENST00000257552 PI4KAP2A4QPH2 592 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 NBPF7P0C2Y1 421 aaPredicted RBP17.4■□□□□ 0.38
MSI1-201ENST00000257552 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
MSI1-201ENST00000257552 SLC39A6Q13433 755 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 PI4KAP1Q8N8J0 262 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 TDRD7Q8NHU6 1098 aaKnown RBP17.4■□□□□ 0.38
MSI1-201ENST00000257552 USP16Q9Y5T5 823 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 ZNF142P52746 1687 aaPredicted RBP17.4■□□□□ 0.38
MSI1-201ENST00000257552 ZKSCAN1P17029 563 aaPredicted RBP17.4■□□□□ 0.38
MSI1-201ENST00000257552 AKAP4Q5JQC9 854 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 FBXO38Q6PIJ6 1188 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 ZNF397Q8NF99 534 aaPredicted RBP17.4■□□□□ 0.38
MSI1-201ENST00000257552 LEO1Q8WVC0 666 aaPredicted RBP17.4■□□□□ 0.38
MSI1-201ENST00000257552 FBXW7Q969H0 707 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 SKILP12757 684 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 LRRC8AQ8IWT6 810 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
MSI1-201ENST00000257552 CLSTN2Q9H4D0 955 aa17.4■□□□□ 0.38
MSI1-201ENST00000257552 PXDNQ92626 1479 aa17.39■□□□□ 0.37
MSI1-201ENST00000257552 GOLGA6L19H0YKK7 550 aa17.39■□□□□ 0.37
MSI1-201ENST00000257552 RUFY2Q8WXA3 655 aa17.39■□□□□ 0.37
MSI1-201ENST00000257552 DDX11Q96FC9 970 aa17.39■□□□□ 0.37
MSI1-201ENST00000257552 DDX19AQ9NUU7 478 aaKnown RBP17.39■□□□□ 0.37
MSI1-201ENST00000257552 RGPD2P0DJD1 1756 aa17.39■□□□□ 0.37
MSI1-201ENST00000257552 CDK11BP21127 795 aaKnown RBP17.39■□□□□ 0.37
MSI1-201ENST00000257552 PROSER3Q2NL68 480 aa17.39■□□□□ 0.37
MSI1-201ENST00000257552 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.37
MSI1-201ENST00000257552 RBM8AQ9Y5S9 174 aaKnown RBP17.39■□□□□ 0.37
MSI1-201ENST00000257552 RNMTO43148 476 aaKnown RBP17.38■□□□□ 0.37
MSI1-201ENST00000257552 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
MSI1-201ENST00000257552 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.38■□□□□ 0.37
MSI1-201ENST00000257552 PGBD1Q96JS3 809 aa17.38■□□□□ 0.37
MSI1-201ENST00000257552 TRERF1Q96PN7 1200 aa17.38■□□□□ 0.37
MSI1-201ENST00000257552 CEMIPQ8WUJ3 1361 aa17.37■□□□□ 0.37
MSI1-201ENST00000257552 NPHP3Q7Z494 1330 aa17.37■□□□□ 0.37
MSI1-201ENST00000257552 PIP4K2AP48426 406 aaPredicted RBP17.37■□□□□ 0.37
MSI1-201ENST00000257552 ELP1O95163 1332 aa17.37■□□□□ 0.37
MSI1-201ENST00000257552 ERBB3P21860 1342 aa17.37■□□□□ 0.37
MSI1-201ENST00000257552 GLRX3O76003 335 aaKnown RBP17.37■□□□□ 0.37
MSI1-201ENST00000257552 RBM6P78332 1123 aaKnown RBP17.37■□□□□ 0.37
MSI1-201ENST00000257552 CREB3L3Q68CJ9 461 aa17.37■□□□□ 0.37
MSI1-201ENST00000257552 FAM227BQ96M60 508 aa17.37■□□□□ 0.37
MSI1-201ENST00000257552 C11orf57Q6ZUT1 292 aaPredicted RBP17.37■□□□□ 0.37
MSI1-201ENST00000257552 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
MSI1-201ENST00000257552 TAF6LQ9Y6J9 622 aa17.37■□□□□ 0.37
MSI1-201ENST00000257552 PDCP20941 246 aa17.36■□□□□ 0.37
MSI1-201ENST00000257552 FOSBP53539 338 aa17.36■□□□□ 0.37
MSI1-201ENST00000257552 POLA2Q14181 598 aa17.36■□□□□ 0.37
MSI1-201ENST00000257552 CCDC69A6NI79 296 aa17.36■□□□□ 0.37
MSI1-201ENST00000257552 IRX5P78411 483 aaPredicted RBP17.36■□□□□ 0.37
MSI1-201ENST00000257552 NECTIN1Q15223 517 aa17.36■□□□□ 0.37
MSI1-201ENST00000257552 KLHL34Q8N239 644 aa17.36■□□□□ 0.37
MSI1-201ENST00000257552 CCDC66A2RUB6 948 aa17.35■□□□□ 0.37
MSI1-201ENST00000257552 AMOTQ4VCS5 1084 aa17.35■□□□□ 0.37
MSI1-201ENST00000257552 BECN2A8MW95 431 aa17.35■□□□□ 0.37
MSI1-201ENST00000257552 ERCC4Q92889 916 aaPredicted RBP17.35■□□□□ 0.37
MSI1-201ENST00000257552 TM6SF1Q9BZW5 370 aa17.35■□□□□ 0.37
MSI1-201ENST00000257552 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
MSI1-201ENST00000257552 JAK2O60674 1132 aa17.34■□□□□ 0.37
MSI1-201ENST00000257552 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
MSI1-201ENST00000257552 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
MSI1-201ENST00000257552 PA2G4Q9UQ80 394 aaKnown RBP17.34■□□□□ 0.37
MSI1-201ENST00000257552 BLOC1S2Q6QNY1 142 aa17.34■□□□□ 0.37
MSI1-201ENST00000257552 GTF3C6Q969F1 213 aa17.34■□□□□ 0.37
MSI1-201ENST00000257552 RBM43Q6ZSC3 357 aaKnown RBP17.33■□□□□ 0.37
MSI1-201ENST00000257552 NYAP1Q6ZVC0 841 aa17.33■□□□□ 0.37
MSI1-201ENST00000257552 TIGD1Q96MW7 591 aa17.33■□□□□ 0.37
MSI1-201ENST00000257552 SLC27A2O14975 620 aa17.33■□□□□ 0.36
MSI1-201ENST00000257552 IFIT2P09913 472 aaKnown RBP17.33■□□□□ 0.36
MSI1-201ENST00000257552 MYL6BP14649 208 aa17.33■□□□□ 0.36
MSI1-201ENST00000257552 IQCB1Q15051 598 aa17.33■□□□□ 0.36
MSI1-201ENST00000257552 CWF19L2Q2TBE0 894 aaKnown RBP17.33■□□□□ 0.36
MSI1-201ENST00000257552 ERO1AQ96HE7 468 aa17.33■□□□□ 0.36
MSI1-201ENST00000257552 ECHDC1Q9NTX5 307 aa17.33■□□□□ 0.36
MSI1-201ENST00000257552 ZNF446Q9NWS9 450 aa17.33■□□□□ 0.36
MSI1-201ENST00000257552 NMIQ13287 307 aaPredicted RBP17.32■□□□□ 0.36
MSI1-201ENST00000257552 ERCC6LQ2NKX8 1250 aa17.32■□□□□ 0.36
MSI1-201ENST00000257552 DNAAF4Q8WXU2 420 aa17.32■□□□□ 0.36
MSI1-201ENST00000257552 SLU7O95391 586 aaKnown RBP17.32■□□□□ 0.36
MSI1-201ENST00000257552 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
MSI1-201ENST00000257552 CCAR2Q8N163 923 aaKnown RBP17.31■□□□□ 0.36
MSI1-201ENST00000257552 LRRN4CLQ8ND94 238 aa17.31■□□□□ 0.36
MSI1-201ENST00000257552 FTOQ9C0B1 505 aaKnown RBP eCLIP17.31■□□□□ 0.36
MSI1-201ENST00000257552 MAP3K2Q9Y2U5 619 aa17.31■□□□□ 0.36
MSI1-201ENST00000257552 PSMA5P28066 241 aa17.31■□□□□ 0.36
MSI1-201ENST00000257552 H3BQV1 296 aa17.31■□□□□ 0.36
MSI1-201ENST00000257552 PPFIA3O75145 1194 aa17.31■□□□□ 0.36
MSI1-201ENST00000257552 CCZ1BP86790 482 aa17.31■□□□□ 0.36
MSI1-201ENST00000257552 CCZ1P86791 482 aaPredicted RBP17.31■□□□□ 0.36
MSI1-201ENST00000257552 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
MSI1-201ENST00000257552 CADPS2Q86UW7 1296 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms